RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 TRIB2Q92519 343 aa18.55■□□□□ 0.56
TSPAN4-201ENST00000346501 USP6NLQ92738 828 aa18.55■□□□□ 0.56
TSPAN4-201ENST00000346501 MMP19Q99542 508 aa18.55■□□□□ 0.56
TSPAN4-201ENST00000346501 UBAC1Q9BSL1 405 aa18.55■□□□□ 0.56
TSPAN4-201ENST00000346501 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.55■□□□□ 0.563e-6■■■■□ 23.5
TSPAN4-201ENST00000346501 SGSM2O43147 1006 aa18.54■□□□□ 0.56
TSPAN4-201ENST00000346501 KDM4AO75164 1064 aa18.54■□□□□ 0.56
TSPAN4-201ENST00000346501 SGPL1O95470 568 aa18.54■□□□□ 0.56
TSPAN4-201ENST00000346501 HOXC6P09630 235 aa18.54■□□□□ 0.56
TSPAN4-201ENST00000346501 PRKAR2AP13861 404 aaKnown RBP18.54■□□□□ 0.56
TSPAN4-201ENST00000346501 OAZ1P54368 228 aa18.54■□□□□ 0.56
TSPAN4-201ENST00000346501 BMP2KLQ5H9B9 411 aa18.54■□□□□ 0.56
TSPAN4-201ENST00000346501 SNRNP48Q6IEG0 339 aaKnown RBP18.54■□□□□ 0.56
TSPAN4-201ENST00000346501 DGKHQ86XP1 1220 aa18.54■□□□□ 0.56
TSPAN4-201ENST00000346501 U2AF1L4Q8WU68 220 aaKnown RBP18.54■□□□□ 0.56
TSPAN4-201ENST00000346501 DEFB118Q96PH6 123 aa18.54■□□□□ 0.56
TSPAN4-201ENST00000346501 FBXO40Q9UH90 709 aa18.54■□□□□ 0.56
TSPAN4-201ENST00000346501 RBBP6Q7Z6E9 1792 aaKnown RBP18.53■□□□□ 0.56
TSPAN4-201ENST00000346501 ATP2A1O14983 1001 aa18.53■□□□□ 0.56
TSPAN4-201ENST00000346501 PLA2G6O60733 806 aa18.53■□□□□ 0.56
TSPAN4-201ENST00000346501 RALYLQ86SE5 291 aaKnown RBP18.53■□□□□ 0.56
TSPAN4-201ENST00000346501 CHMP4CQ96CF2 233 aa18.53■□□□□ 0.56
TSPAN4-201ENST00000346501 DDX11Q96FC9 970 aa18.53■□□□□ 0.56
TSPAN4-201ENST00000346501 TMEM47Q9BQJ4 181 aa18.53■□□□□ 0.56
TSPAN4-201ENST00000346501 KAT14Q9H8E8 782 aa18.53■□□□□ 0.56
TSPAN4-201ENST00000346501 SLC38A10Q9HBR0 1119 aa18.53■□□□□ 0.56
TSPAN4-201ENST00000346501 ZNF214Q9UL59 606 aaPredicted RBP18.53■□□□□ 0.56
TSPAN4-201ENST00000346501 TACC3Q9Y6A5 838 aa18.53■□□□□ 0.56
TSPAN4-201ENST00000346501 NEDD4P46934 1319 aa18.52■□□□□ 0.56
TSPAN4-201ENST00000346501 B4E1Z4 1266 aa18.52■□□□□ 0.56
TSPAN4-201ENST00000346501 NOVP48745 357 aa18.52■□□□□ 0.56
TSPAN4-201ENST00000346501 KCTD1Q719H9 257 aa18.52■□□□□ 0.56
TSPAN4-201ENST00000346501 NBPF3Q9H094 633 aa18.52■□□□□ 0.56
TSPAN4-201ENST00000346501 PAK6Q9NQU5 681 aaPredicted RBP18.52■□□□□ 0.56
TSPAN4-201ENST00000346501 PNMA2Q9UL42 364 aa18.52■□□□□ 0.56
TSPAN4-201ENST00000346501 A0A0G2JMZ2 1700 aa18.52■□□□□ 0.55
TSPAN4-201ENST00000346501 RLFQ13129 1914 aa18.51■□□□□ 0.55
TSPAN4-201ENST00000346501 ERICH2A1L162 156 aa18.51■□□□□ 0.55
TSPAN4-201ENST00000346501 SART3Q15020 963 aaKnown RBP18.51■□□□□ 0.55
TSPAN4-201ENST00000346501 CCL14Q16627 93 aa18.51■□□□□ 0.55
TSPAN4-201ENST00000346501 CHST13Q8NET6 341 aa18.51■□□□□ 0.55
TSPAN4-201ENST00000346501 ZSCAN10Q96SZ4 725 aaPredicted RBP18.51■□□□□ 0.55
TSPAN4-201ENST00000346501 ZKSCAN3Q9BRR0 538 aa18.51■□□□□ 0.55
TSPAN4-201ENST00000346501 RAVER2Q9HCJ3 691 aaKnown RBP18.51■□□□□ 0.55
TSPAN4-201ENST00000346501 MSCO60682 206 aa18.5■□□□□ 0.55
TSPAN4-201ENST00000346501 CNGA1P29973 690 aa18.5■□□□□ 0.55
TSPAN4-201ENST00000346501 CACNB2Q08289 660 aaPredicted RBP18.5■□□□□ 0.55
TSPAN4-201ENST00000346501 TKFCQ3LXA3 575 aa18.5■□□□□ 0.55
TSPAN4-201ENST00000346501 GPATCH4Q5T3I0 446 aaKnown RBP18.5■□□□□ 0.55
TSPAN4-201ENST00000346501 ERICH6BQ5W0A0 696 aa18.5■□□□□ 0.55
TSPAN4-201ENST00000346501 OLFML2BQ68BL8 750 aa18.5■□□□□ 0.55
TSPAN4-201ENST00000346501 ANKRD35Q8N283 1001 aa18.5■□□□□ 0.55
TSPAN4-201ENST00000346501 REPS2Q8NFH8 660 aa18.5■□□□□ 0.55
TSPAN4-201ENST00000346501 HTATIP2Q9BUP3 242 aa18.5■□□□□ 0.55
TSPAN4-201ENST00000346501 ZSWIM5Q9P217 1185 aa18.5■□□□□ 0.55
TSPAN4-201ENST00000346501 FARP2O94887 1054 aaPredicted RBP18.49■□□□□ 0.55
TSPAN4-201ENST00000346501 PTH1RQ03431 593 aa18.49■□□□□ 0.55
TSPAN4-201ENST00000346501 MAP3K21Q5TCX8 1036 aa18.49■□□□□ 0.55
TSPAN4-201ENST00000346501 NCOA7Q8NI08 942 aa18.49■□□□□ 0.55
TSPAN4-201ENST00000346501 NPLOC4Q8TAT6 608 aa18.49■□□□□ 0.55
TSPAN4-201ENST00000346501 IL25Q9H293 177 aa18.49■□□□□ 0.55
TSPAN4-201ENST00000346501 GPCPD1Q9NPB8 672 aa18.49■□□□□ 0.55
TSPAN4-201ENST00000346501 PRR12Q9ULL5 1215 aa18.49■□□□□ 0.55
TSPAN4-201ENST00000346501 DIS3Q9Y2L1 958 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-201ENST00000346501 PLXNB2O15031 1838 aa18.49■□□□□ 0.55
TSPAN4-201ENST00000346501 LAMA4Q16363 1823 aa18.49■□□□□ 0.55
TSPAN4-201ENST00000346501 PARP14Q460N5 1801 aa18.49■□□□□ 0.55
TSPAN4-201ENST00000346501 TNKSO95271 1327 aa18.49■□□□□ 0.55
TSPAN4-201ENST00000346501 PDHBP11177 359 aa18.48■□□□□ 0.55
TSPAN4-201ENST00000346501 TRIM32Q13049 653 aa18.48■□□□□ 0.55
TSPAN4-201ENST00000346501 IFIT1BQ5T764 474 aaKnown RBP18.48■□□□□ 0.55
TSPAN4-201ENST00000346501 SYDE2Q5VT97 1194 aa18.48■□□□□ 0.55
TSPAN4-201ENST00000346501 ANKLE1Q8NAG6 615 aa18.48■□□□□ 0.55
TSPAN4-201ENST00000346501 PNMA1Q8ND90 353 aa18.48■□□□□ 0.55
TSPAN4-201ENST00000346501 MAP4K1Q92918 833 aa18.48■□□□□ 0.55
TSPAN4-201ENST00000346501 ESYT1Q9BSJ8 1104 aa18.48■□□□□ 0.55
TSPAN4-201ENST00000346501 ACAD9Q9H845 621 aa18.48■□□□□ 0.55
TSPAN4-201ENST00000346501 ANO2Q9NQ90 1003 aa18.48■□□□□ 0.55
TSPAN4-201ENST00000346501 FRMPD2Q68DX3 1309 aaPredicted RBP18.48■□□□□ 0.55
TSPAN4-201ENST00000346501 COL11A1P12107 1806 aaPredicted RBP18.47■□□□□ 0.55
TSPAN4-201ENST00000346501 COBLO75128 1261 aa18.47■□□□□ 0.55
TSPAN4-201ENST00000346501 CDC45O75419 566 aa18.47■□□□□ 0.55
TSPAN4-201ENST00000346501 CYP21A2P08686 494 aa18.47■□□□□ 0.55
TSPAN4-201ENST00000346501 CYP2C19P33261 490 aa18.47■□□□□ 0.55
TSPAN4-201ENST00000346501 RNF20Q5VTR2 975 aa18.47■□□□□ 0.55
TSPAN4-201ENST00000346501 CCDC174Q6PII3 467 aa18.47■□□□□ 0.55
TSPAN4-201ENST00000346501 HOMER2Q9NSB8 354 aa18.47■□□□□ 0.55
TSPAN4-201ENST00000346501 RBM8AQ9Y5S9 174 aaKnown RBP18.47■□□□□ 0.55
TSPAN4-201ENST00000346501 ZNF236Q9UL36 1845 aa18.46■□□□□ 0.55
TSPAN4-201ENST00000346501 ALAS1P13196 640 aa18.46■□□□□ 0.55
TSPAN4-201ENST00000346501 ZNF543Q08ER8 600 aa18.46■□□□□ 0.55
TSPAN4-201ENST00000346501 BTNL9Q6UXG8 535 aa18.46■□□□□ 0.55
TSPAN4-201ENST00000346501 ANKS1AQ92625 1134 aa18.46■□□□□ 0.55
TSPAN4-201ENST00000346501 SHISA4Q96DD7 197 aa18.46■□□□□ 0.55
TSPAN4-201ENST00000346501 MAML3Q96JK9 1138 aa18.46■□□□□ 0.55
TSPAN4-201ENST00000346501 CRISPLD2Q9H0B8 497 aa18.46■□□□□ 0.55
TSPAN4-201ENST00000346501 PPP4R2Q9NY27 417 aa18.46■□□□□ 0.55
TSPAN4-201ENST00000346501 CCPG1Q9ULG6 757 aa18.46■□□□□ 0.55
TSPAN4-201ENST00000346501 CNPY2Q9Y2B0 182 aa18.46■□□□□ 0.55
TSPAN4-201ENST00000346501 E7EWF7 191 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms