RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 NEDD4P46934 1319 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 WDR19Q8NEZ3 1342 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 NRKQ7Z2Y5 1582 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 RPS6KA1Q15418 735 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 ALX1Q15699 326 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 SGMS1Q86VZ5 419 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 RABEP2Q9H5N1 569 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 PSTPIP2Q9H939 334 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 ATP6V0A2Q9Y487 856 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 MYO3AQ8NEV4 1616 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 PHLPP2Q6ZVD8 1323 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 ZNF609O15014 1411 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 SMIM23A6NLE4 172 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 KIF28PB7ZC32 967 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 FLOT1O75955 427 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 SEC31AO94979 1220 aaKnown RBP7.98□□□□□ -1.13
VCAN-202ENST00000342785 CFBP00751 764 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 USP17L8P0C7I0 530 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 PAGE5Q96GU1 130 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 CCDC77Q9BR77 488 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 PCDHA4Q9UN74 947 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 PCDHB13Q9Y5F0 798 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 ENC1O14682 589 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 CASP1P29466 404 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 GRIPAP1Q4V328 841 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 CPLX4Q7Z7G2 160 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 FMNL3Q8IVF7 1028 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 CCDC26Q8TAB7 109 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 TRIM31Q9BZY9 425 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 CDHR2Q9BYE9 1310 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 USP27XA6NNY8 438 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 B4DLN1 442 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 HPDP32754 393 aaPredicted RBP7.98□□□□□ -1.13
VCAN-202ENST00000342785 CALCOCO2Q13137 446 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 LONRF2Q1L5Z9 754 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 USH1GQ495M9 461 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 GPBP1Q86WP2 473 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 ACRBPQ8NEB7 543 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 OXER1Q8TDS5 423 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 DYNLL2Q96FJ2 89 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 RASSF4Q9H2L5 321 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 RIPOR2Q9Y4F9 1068 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 FRMPD2Q68DX3 1309 aaPredicted RBP7.98□□□□□ -1.13
VCAN-202ENST00000342785 SOWAHDA6NJG2 315 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 GSG1L2A8MUP6 293 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 EXOC3O60645 756 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 GJC1P36383 396 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 CLCN6P51797 869 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 SP4Q02446 784 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 ZYXQ15942 572 aaKnown RBP7.98□□□□□ -1.13
VCAN-202ENST00000342785 ZSCAN26Q16670 478 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 STAG1Q8WVM7 1258 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 MTA3Q9BTC8 594 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 LY9Q9HBG7 655 aa7.98□□□□□ -1.13
VCAN-202ENST00000342785 MTRF1LQ9UGC7 380 aaKnown RBP7.98□□□□□ -1.13
VCAN-202ENST00000342785 ARMCX3Q9UH62 379 aaPredicted RBP7.98□□□□□ -1.13
VCAN-202ENST00000342785 DDX41Q9UJV9 622 aaKnown RBP7.98□□□□□ -1.13
VCAN-202ENST00000342785 ARHGEF35A5YM69 484 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 TCP1P17987 556 aaKnown RBP7.97□□□□□ -1.13
VCAN-202ENST00000342785 PAK2Q13177 524 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 CCDC25Q86WR0 208 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 DGKHQ86XP1 1220 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 GIMAP7Q8NHV1 300 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 CNOT6LQ96LI5 555 aaKnown RBP7.97□□□□□ -1.13
VCAN-202ENST00000342785 PLEKHA4Q9H4M7 779 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 CCDC151A5D8V7 595 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 EZRP15311 586 aaKnown RBP7.97□□□□□ -1.13
VCAN-202ENST00000342785 ATP2B4P23634 1241 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 PLCB3Q01970 1234 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 PPFIA1Q13136 1202 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 RBM26Q5T8P6 1007 aaKnown RBP7.97□□□□□ -1.13
VCAN-202ENST00000342785 SHC4Q6S5L8 630 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 TMTC3Q6ZXV5 915 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 HINFPQ9BQA5 517 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 TMEM232C9JQI7 657 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 UBLCP1Q8WVY7 318 aaPredicted RBP7.97□□□□□ -1.13
VCAN-202ENST00000342785 LRRC45Q96CN5 670 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 DHTKD1Q96HY7 919 aaPredicted RBP7.97□□□□□ -1.13
VCAN-202ENST00000342785 BRIP1Q9BX63 1249 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 CUEDC2Q9H467 287 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 MTUS1Q9ULD2 1270 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 UBN2Q6ZU65 1347 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 FDPSP14324 419 aaKnown RBP7.97□□□□□ -1.13
VCAN-202ENST00000342785 ZRSR2Q15696 482 aaKnown RBP7.97□□□□□ -1.13
VCAN-202ENST00000342785 MYCT1Q8N699 235 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 P2RX5Q93086 422 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 TEKT1Q969V4 418 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 KCNF1Q9H3M0 494 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 TSKSQ9UJT2 592 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 HYOU1Q9Y4L1 999 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 SPOPO43791 374 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 CALUO43852 315 aaPredicted RBP7.97□□□□□ -1.13
VCAN-202ENST00000342785 CYP19A1P11511 503 aaPredicted RBP7.97□□□□□ -1.13
VCAN-202ENST00000342785 EEF2P13639 858 aaKnown RBP7.97□□□□□ -1.13
VCAN-202ENST00000342785 PRDX5P30044 214 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 ACTN2P35609 894 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 ZNF658Q5TYW1 1059 aaPredicted RBP7.97□□□□□ -1.13
VCAN-202ENST00000342785 IMPG2Q9BZV3 1241 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 MYO1AQ9UBC5 1043 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 LEMD3Q9Y2U8 911 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms