RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 COL3A1P02461 1466 aaPredicted RBP13.33□□□□□ -0.28
CDH5-201ENST00000341529 GYS2P54840 703 aa13.33□□□□□ -0.28
CDH5-201ENST00000341529 GRIN1Q05586 938 aa13.33□□□□□ -0.28
CDH5-201ENST00000341529 FBXO38Q6PIJ6 1188 aa13.33□□□□□ -0.28
CDH5-201ENST00000341529 SND1Q7KZF4 910 aaKnown RBP eCLIP13.33□□□□□ -0.28
CDH5-201ENST00000341529 KSR1Q8IVT5 923 aa13.33□□□□□ -0.28
CDH5-201ENST00000341529 TPH2Q8IWU9 490 aa13.33□□□□□ -0.28
CDH5-201ENST00000341529 SECISBP2LQ93073 1101 aaKnown RBP13.33□□□□□ -0.28
CDH5-201ENST00000341529 PCDHA12Q9UN75 941 aa13.33□□□□□ -0.28
CDH5-201ENST00000341529 CETN3O15182 167 aa13.32□□□□□ -0.28
CDH5-201ENST00000341529 AP5Z1O43299 807 aa13.32□□□□□ -0.28
CDH5-201ENST00000341529 SLFN14P0C7P3 912 aa13.32□□□□□ -0.28
CDH5-201ENST00000341529 ARHGAP44Q17R89 818 aa13.32□□□□□ -0.28
CDH5-201ENST00000341529 HDXQ7Z353 690 aa13.32□□□□□ -0.28
CDH5-201ENST00000341529 NEK8Q86SG6 692 aa13.32□□□□□ -0.28
CDH5-201ENST00000341529 SMAP1Q8IYB5 467 aaPredicted RBP13.32□□□□□ -0.28
CDH5-201ENST00000341529 KIFC2Q96AC6 838 aa13.32□□□□□ -0.28
CDH5-201ENST00000341529 MINPP1Q9UNW1 487 aa13.32□□□□□ -0.28
CDH5-201ENST00000341529 EPN1Q9Y6I3 576 aaPredicted RBP13.32□□□□□ -0.28
CDH5-201ENST00000341529 GCNT3O95395 438 aa13.32□□□□□ -0.28
CDH5-201ENST00000341529 MYCLP12524 364 aaPredicted RBP13.32□□□□□ -0.28
CDH5-201ENST00000341529 SMC1AQ14683 1233 aaKnown RBP13.32□□□□□ -0.28
CDH5-201ENST00000341529 UBE2SQ16763 222 aa13.32□□□□□ -0.28
CDH5-201ENST00000341529 NSMFQ6X4W1 530 aa13.32□□□□□ -0.28
CDH5-201ENST00000341529 TBCKQ8TEA7 893 aa13.32□□□□□ -0.28
CDH5-201ENST00000341529 SMCR8Q8TEV9 937 aaPredicted RBP13.32□□□□□ -0.28
CDH5-201ENST00000341529 GTPBP6O43824 516 aaPredicted RBP13.32□□□□□ -0.28
CDH5-201ENST00000341529 ABCB4P21439 1286 aa13.32□□□□□ -0.28
CDH5-201ENST00000341529 NCBP1Q09161 790 aaKnown RBP13.32□□□□□ -0.28
CDH5-201ENST00000341529 CUL4BQ13620 913 aa13.32□□□□□ -0.28
CDH5-201ENST00000341529 CEMIPQ8WUJ3 1361 aa13.32□□□□□ -0.28
CDH5-201ENST00000341529 PALLDQ8WX93 1383 aa13.32□□□□□ -0.28
CDH5-201ENST00000341529 VAV2P52735 878 aa13.32□□□□□ -0.28
CDH5-201ENST00000341529 ST3GAL1Q11201 340 aa13.32□□□□□ -0.28
CDH5-201ENST00000341529 MTF1Q14872 753 aa13.32□□□□□ -0.28
CDH5-201ENST00000341529 CNKSR2Q8WXI2 1034 aa13.32□□□□□ -0.28
CDH5-201ENST00000341529 GTPBP4Q9BZE4 634 aaKnown RBP13.32□□□□□ -0.28
CDH5-201ENST00000341529 PSTPIP2Q9H939 334 aa13.32□□□□□ -0.28
CDH5-201ENST00000341529 MAP2P11137 1827 aaKnown RBP13.31□□□□□ -0.28
CDH5-201ENST00000341529 MEIS1O00470 390 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 CEP104O60308 925 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 GDF11O95390 407 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 TUBB4AP04350 444 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 KLHL30Q0D2K2 578 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 GPBP1Q86WP2 473 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 TBC1D5Q92609 795 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 PAGE5Q96GU1 130 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 TUBGCP2Q9BSJ2 902 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 SPTLC3Q9NUV7 552 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 GJA3Q9Y6H8 435 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 CLRN2A0PK11 232 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 CCDC169A6NNP5 214 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 BACH1O14867 736 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 CTNNA2P26232 953 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 C8orf74Q6P047 294 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 CLEC10AQ8IUN9 316 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 GJA10Q969M2 543 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 ATP8A2Q9NTI2 1148 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 TCP10L2B9ZVM9 353 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 PTPREP23469 700 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 PABPC4Q13310 644 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDH5-201ENST00000341529 TBC1D9BQ66K14 1250 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 TOGARAM2Q6ZUX3 1019 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 STXBP4Q6ZWJ1 553 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 MYCT1Q8N699 235 aa13.31□□□□□ -0.28
CDH5-201ENST00000341529 SH3RF3Q8TEJ3 882 aaPredicted RBP13.31□□□□□ -0.28
CDH5-201ENST00000341529 IPO4Q8TEX9 1081 aaKnown RBP13.31□□□□□ -0.28
CDH5-201ENST00000341529 ZC3H13Q5T200 1668 aaKnown RBP13.31□□□□□ -0.28
CDH5-201ENST00000341529 GUCY2FP51841 1108 aa13.3□□□□□ -0.28
CDH5-201ENST00000341529 VSTM4Q8IW00 320 aa13.3□□□□□ -0.28
CDH5-201ENST00000341529 DHX40Q8IX18 779 aaKnown RBP13.3□□□□□ -0.28
CDH5-201ENST00000341529 MRPL44Q9H9J2 332 aaKnown RBP13.3□□□□□ -0.28
CDH5-201ENST00000341529 KANSL2Q9H9L4 492 aa13.3□□□□□ -0.28
CDH5-201ENST00000341529 THRAP3Q9Y2W1 955 aaKnown RBP13.3□□□□□ -0.28
CDH5-201ENST00000341529 SRPRBQ9Y5M8 271 aaKnown RBP13.3□□□□□ -0.28
CDH5-201ENST00000341529 SAR1BQ9Y6B6 198 aa13.3□□□□□ -0.28
CDH5-201ENST00000341529 PREX1Q8TCU6 1659 aa13.3□□□□□ -0.28
CDH5-201ENST00000341529 ERVV-1B6SEH8 477 aa13.3□□□□□ -0.28
CDH5-201ENST00000341529 IKBKBO14920 756 aa13.3□□□□□ -0.28
CDH5-201ENST00000341529 CFAP58Q5T655 872 aa13.3□□□□□ -0.28
CDH5-201ENST00000341529 TTC19Q6DKK2 380 aaPredicted RBP13.3□□□□□ -0.28
CDH5-201ENST00000341529 PLA2G4DQ86XP0 818 aa13.3□□□□□ -0.28
CDH5-201ENST00000341529 PAIP2Q9BPZ3 127 aaKnown RBP13.3□□□□□ -0.28
CDH5-201ENST00000341529 KIAA1024Q9UPX6 916 aa13.3□□□□□ -0.28
CDH5-201ENST00000341529 PCDHA1Q9Y5I3 950 aa13.3□□□□□ -0.28
CDH5-201ENST00000341529 STX10O60499 249 aa13.3□□□□□ -0.28
CDH5-201ENST00000341529 EEF2P13639 858 aaKnown RBP13.3□□□□□ -0.28
CDH5-201ENST00000341529 CYP2J2P51589 502 aa13.3□□□□□ -0.28
CDH5-201ENST00000341529 POLR2FP61218 127 aaKnown RBP13.3□□□□□ -0.28
CDH5-201ENST00000341529 MAP2K1Q02750 393 aaPredicted RBP13.3□□□□□ -0.28
CDH5-201ENST00000341529 IQCB1Q15051 598 aa13.3□□□□□ -0.28
CDH5-201ENST00000341529 NAA35Q5VZE5 725 aa13.3□□□□□ -0.28
CDH5-201ENST00000341529 MRRFQ96E11 262 aaKnown RBP13.3□□□□□ -0.28
CDH5-201ENST00000341529 CNOT6LQ96LI5 555 aaKnown RBP13.3□□□□□ -0.28
CDH5-201ENST00000341529 TNS3Q68CZ2 1445 aa13.3□□□□□ -0.28
CDH5-201ENST00000341529 USP42Q9H9J4 1324 aaKnown RBP13.3□□□□□ -0.28
CDH5-201ENST00000341529 STAG2Q8N3U4 1231 aa13.29□□□□□ -0.28
CDH5-201ENST00000341529 GSDMAQ96QA5 445 aa13.29□□□□□ -0.28
CDH5-201ENST00000341529 EHMT1Q9H9B1 1298 aa13.29□□□□□ -0.28
CDH5-201ENST00000341529 PSDA5PKW4 1024 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms