RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 CENPQQ7L2Z9 268 aaPredicted RBP12.23□□□□□ -0.45
TPM3-207ENST00000341372 CCDC84Q86UT8 332 aaPredicted RBP12.23□□□□□ -0.45
TPM3-207ENST00000341372 ZNF280CQ8ND82 737 aa12.23□□□□□ -0.45
TPM3-207ENST00000341372 ZDHHC16Q969W1 377 aa12.23□□□□□ -0.45
TPM3-207ENST00000341372 TRIM6-TRIM34B2RNG4 842 aa12.23□□□□□ -0.45
TPM3-207ENST00000341372 FOXP2O15409 715 aa12.23□□□□□ -0.45
TPM3-207ENST00000341372 TBC1D8O95759 1140 aa12.23□□□□□ -0.45
TPM3-207ENST00000341372 GSPT1P15170 499 aaKnown RBP12.23□□□□□ -0.45
TPM3-207ENST00000341372 ARHGAP4P98171 946 aa12.23□□□□□ -0.45
TPM3-207ENST00000341372 COL19A1Q14993 1142 aa12.23□□□□□ -0.45
TPM3-207ENST00000341372 TTC22Q5TAA0 569 aa12.23□□□□□ -0.45
TPM3-207ENST00000341372 C16orf86Q6ZW13 317 aa12.23□□□□□ -0.45
TPM3-207ENST00000341372 TAS1R3Q7RTX0 852 aa12.23□□□□□ -0.45
TPM3-207ENST00000341372 R3HDMLQ9H3Y0 253 aa12.23□□□□□ -0.45
TPM3-207ENST00000341372 CYP2D7A0A087X1C5 515 aa12.22□□□□□ -0.45
TPM3-207ENST00000341372 A0A0D9SFI3 127 aa12.22□□□□□ -0.45
TPM3-207ENST00000341372 GPR25O00155 361 aa12.22□□□□□ -0.45
TPM3-207ENST00000341372 CRHR2Q13324 411 aa12.22□□□□□ -0.45
TPM3-207ENST00000341372 OCLNQ16625 522 aa12.22□□□□□ -0.45
TPM3-207ENST00000341372 CERKLQ49MI3 558 aaPredicted RBP12.22□□□□□ -0.45
TPM3-207ENST00000341372 EGFLAMQ63HQ2 1017 aa12.22□□□□□ -0.45
TPM3-207ENST00000341372 GPAT2Q6NUI2 795 aa12.22□□□□□ -0.45
TPM3-207ENST00000341372 FASTKD5Q7L8L6 764 aaKnown RBP12.22□□□□□ -0.45
TPM3-207ENST00000341372 AMOTL1Q8IY63 956 aa12.22□□□□□ -0.45
TPM3-207ENST00000341372 PIF1Q9H611 641 aa12.22□□□□□ -0.45
TPM3-207ENST00000341372 AS3MTQ9HBK9 375 aa12.22□□□□□ -0.45
TPM3-207ENST00000341372 SLC45A1Q9Y2W3 748 aa12.22□□□□□ -0.45
TPM3-207ENST00000341372 ADGRA2Q96PE1 1338 aa12.22□□□□□ -0.45
TPM3-207ENST00000341372 SMIM22K7EJ46 135 aa12.21□□□□□ -0.45
TPM3-207ENST00000341372 GH2P01242 217 aa12.21□□□□□ -0.45
TPM3-207ENST00000341372 IFNL3Q8IZI9 196 aa12.21□□□□□ -0.45
TPM3-207ENST00000341372 SLC44A5Q8NCS7 719 aa12.21□□□□□ -0.45
TPM3-207ENST00000341372 RILPL2Q969X0 211 aa12.21□□□□□ -0.45
TPM3-207ENST00000341372 FAM227BQ96M60 508 aa12.21□□□□□ -0.45
TPM3-207ENST00000341372 TRIM75PA6NK02 468 aa12.21□□□□□ -0.46
TPM3-207ENST00000341372 SDSP20132 328 aa12.21□□□□□ -0.46
TPM3-207ENST00000341372 GUCY1A2P33402 732 aa12.21□□□□□ -0.46
TPM3-207ENST00000341372 CLDN10P78369 228 aa12.21□□□□□ -0.46
TPM3-207ENST00000341372 SPP2Q13103 211 aa12.21□□□□□ -0.46
TPM3-207ENST00000341372 NMIQ13287 307 aaPredicted RBP12.21□□□□□ -0.46
TPM3-207ENST00000341372 TAF1CQ15572 869 aaPredicted RBP12.21□□□□□ -0.46
TPM3-207ENST00000341372 ABCB5Q2M3G0 1257 aa12.21□□□□□ -0.46
TPM3-207ENST00000341372 MCMDC2Q4G0Z9 681 aa12.21□□□□□ -0.46
TPM3-207ENST00000341372 CCDC129Q6ZRS4 1044 aa12.21□□□□□ -0.46
TPM3-207ENST00000341372 DYNLL2Q96FJ2 89 aa12.21□□□□□ -0.46
TPM3-207ENST00000341372 PPME1Q9Y570 386 aa12.21□□□□□ -0.46
TPM3-207ENST00000341372 ZMYM6O95789 1325 aa12.21□□□□□ -0.46
TPM3-207ENST00000341372 HIP1O00291 1037 aa12.2□□□□□ -0.46
TPM3-207ENST00000341372 P4HBP07237 508 aaKnown RBP12.2□□□□□ -0.46
TPM3-207ENST00000341372 GTF2F1P35269 517 aaKnown RBP eCLIP12.2□□□□□ -0.46
TPM3-207ENST00000341372 CDK8P49336 464 aa12.2□□□□□ -0.46
TPM3-207ENST00000341372 ATN1P54259 1190 aaPredicted RBP12.2□□□□□ -0.46
TPM3-207ENST00000341372 ZNF296Q8WUU4 475 aaPredicted RBP12.2□□□□□ -0.46
TPM3-207ENST00000341372 SYMPKQ92797 1274 aaKnown RBP12.2□□□□□ -0.46
TPM3-207ENST00000341372 NACAP1Q9BZK3 213 aa12.2□□□□□ -0.46
TPM3-207ENST00000341372 ZFYVE28Q9HCC9 887 aa12.2□□□□□ -0.46
TPM3-207ENST00000341372 AGTPBP1Q9UPW5 1226 aa12.2□□□□□ -0.46
TPM3-207ENST00000341372 LAMA4Q16363 1823 aa12.2□□□□□ -0.46
TPM3-207ENST00000341372 CCDC171Q6TFL3 1326 aa12.2□□□□□ -0.46
TPM3-207ENST00000341372 PDHXO00330 501 aa12.2□□□□□ -0.46
TPM3-207ENST00000341372 TDO2P48775 406 aa12.2□□□□□ -0.46
TPM3-207ENST00000341372 BACE1P56817 501 aa12.2□□□□□ -0.46
TPM3-207ENST00000341372 MTMR3Q13615 1198 aa12.2□□□□□ -0.46
TPM3-207ENST00000341372 ALX1Q15699 326 aa12.2□□□□□ -0.46
TPM3-207ENST00000341372 ZNF589Q86UQ0 364 aaPredicted RBP12.2□□□□□ -0.46
TPM3-207ENST00000341372 PRIMPOLQ96LW4 560 aa12.2□□□□□ -0.46
TPM3-207ENST00000341372 CCDC17Q96LX7 622 aa12.2□□□□□ -0.46
TPM3-207ENST00000341372 CABP5Q9NP86 173 aa12.2□□□□□ -0.46
TPM3-207ENST00000341372 PCDHGA4Q9Y5G9 962 aa12.2□□□□□ -0.46
TPM3-207ENST00000341372 ZBBXA8MT70 800 aa12.19□□□□□ -0.46
TPM3-207ENST00000341372 C19orf81C9J6K1 198 aa12.19□□□□□ -0.46
TPM3-207ENST00000341372 TLR2O60603 784 aa12.19□□□□□ -0.46
TPM3-207ENST00000341372 FKTNO75072 461 aa12.19□□□□□ -0.46
TPM3-207ENST00000341372 SDE2Q6IQ49 451 aa12.19□□□□□ -0.46
TPM3-207ENST00000341372 TMEM179Q6ZVK1 233 aa12.19□□□□□ -0.46
TPM3-207ENST00000341372 RGL4Q8IZJ4 473 aa12.19□□□□□ -0.46
TPM3-207ENST00000341372 ZNF454Q8N9F8 522 aa12.19□□□□□ -0.46
TPM3-207ENST00000341372 C12orf42Q96LP6 360 aa12.19□□□□□ -0.46
TPM3-207ENST00000341372 FAM161BQ96MY7 647 aa12.19□□□□□ -0.46
TPM3-207ENST00000341372 AKR1B1P15121 316 aa12.18□□□□□ -0.46
TPM3-207ENST00000341372 HMGCS2P54868 508 aa12.18□□□□□ -0.46
TPM3-207ENST00000341372 VPS53Q5VIR6 699 aa12.18□□□□□ -0.46
TPM3-207ENST00000341372 GADL1Q6ZQY3 521 aa12.18□□□□□ -0.46
TPM3-207ENST00000341372 PIP4P2Q8N4L2 257 aa12.18□□□□□ -0.46
TPM3-207ENST00000341372 PARK7Q99497 189 aaKnown RBP12.18□□□□□ -0.46
TPM3-207ENST00000341372 KIAA1683Q9H0B3 1180 aa12.18□□□□□ -0.46
TPM3-207ENST00000341372 NAPBQ9H115 298 aa12.18□□□□□ -0.46
TPM3-207ENST00000341372 CXXC1Q9P0U4 656 aaPredicted RBP12.18□□□□□ -0.46
TPM3-207ENST00000341372 APPP05067 770 aa12.18□□□□□ -0.46
TPM3-207ENST00000341372 SEPT2Q15019 361 aa12.18□□□□□ -0.46
TPM3-207ENST00000341372 TREML2Q5T2D2 321 aa12.18□□□□□ -0.46
TPM3-207ENST00000341372 SPACA7Q96KW9 195 aa12.18□□□□□ -0.46
TPM3-207ENST00000341372 ANAPC4Q9UJX5 808 aa12.18□□□□□ -0.46
TPM3-207ENST00000341372 PLIN4Q96Q06 1357 aa12.17□□□□□ -0.46
TPM3-207ENST00000341372 HSPD1P10809 573 aaKnown RBP12.17□□□□□ -0.46
TPM3-207ENST00000341372 ATP2B1P20020 1258 aa12.17□□□□□ -0.46
TPM3-207ENST00000341372 PPARAQ07869 468 aa12.17□□□□□ -0.46
TPM3-207ENST00000341372 RAB3GAP1Q15042 981 aa12.17□□□□□ -0.46
TPM3-207ENST00000341372 C17orf99Q6UX52 265 aa12.17□□□□□ -0.46
TPM3-207ENST00000341372 CTU1Q7Z7A3 348 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms