RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 SFPQP23246 707 aaKnown RBP eCLIP18.06■□□□□ 0.48
CCDC144A-202ENST00000340621 ERCC5P28715 1186 aaPredicted RBP18.06■□□□□ 0.48
CCDC144A-202ENST00000340621 LONP1P36776 959 aaKnown RBP18.06■□□□□ 0.48
CCDC144A-202ENST00000340621 NAPAP54920 295 aa18.06■□□□□ 0.48
CCDC144A-202ENST00000340621 APOBEC3HQ6NTF7 200 aaKnown RBP18.06■□□□□ 0.48
CCDC144A-202ENST00000340621 PIGSQ96S52 555 aa18.06■□□□□ 0.48
CCDC144A-202ENST00000340621 TMEM60Q9H2L4 133 aa18.06■□□□□ 0.48
CCDC144A-202ENST00000340621 CDK5RAP2Q96SN8 1893 aa18.06■□□□□ 0.48
CCDC144A-202ENST00000340621 SMCO2A6NFE2 343 aa18.06■□□□□ 0.48
CCDC144A-202ENST00000340621 TNNT1P13805 278 aa18.06■□□□□ 0.48
CCDC144A-202ENST00000340621 SMARCA1P28370 1054 aa18.06■□□□□ 0.48
CCDC144A-202ENST00000340621 EIF6P56537 245 aaKnown RBP18.06■□□□□ 0.48
CCDC144A-202ENST00000340621 VSTM4Q8IW00 320 aa18.06■□□□□ 0.48
CCDC144A-202ENST00000340621 BLZF1Q9H2G9 400 aa18.06■□□□□ 0.48
CCDC144A-202ENST00000340621 DBNDD1Q9H9R9 158 aa18.06■□□□□ 0.48
CCDC144A-202ENST00000340621 SAMSN1Q9NSI8 373 aaKnown RBP18.06■□□□□ 0.48
CCDC144A-202ENST00000340621 TRMT1Q9NXH9 659 aaKnown RBP18.06■□□□□ 0.48
CCDC144A-202ENST00000340621 PDHBP11177 359 aa18.05■□□□□ 0.48
CCDC144A-202ENST00000340621 CDK11BP21127 795 aaKnown RBP18.05■□□□□ 0.48
CCDC144A-202ENST00000340621 RBM10P98175 930 aaKnown RBP18.05■□□□□ 0.48
CCDC144A-202ENST00000340621 ZNF772Q68DY9 489 aaPredicted RBP18.05■□□□□ 0.48
CCDC144A-202ENST00000340621 HHIPL2Q6UWX4 724 aa18.05■□□□□ 0.48
CCDC144A-202ENST00000340621 CLEC10AQ8IUN9 316 aa18.05■□□□□ 0.48
CCDC144A-202ENST00000340621 SMYD4Q8IYR2 804 aaPredicted RBP18.05■□□□□ 0.48
CCDC144A-202ENST00000340621 SERPINB13Q9UIV8 391 aa18.05■□□□□ 0.48
CCDC144A-202ENST00000340621 FRMPD2Q68DX3 1309 aaPredicted RBP18.05■□□□□ 0.48
CCDC144A-202ENST00000340621 IGKV6D-41A0A0C4DH26 115 aa18.04■□□□□ 0.48
CCDC144A-202ENST00000340621 DTHD1Q6ZMT9 781 aa18.04■□□□□ 0.48
CCDC144A-202ENST00000340621 FAM177A1Q8N128 213 aaPredicted RBP18.04■□□□□ 0.48
CCDC144A-202ENST00000340621 CCAR2Q8N163 923 aaKnown RBP18.04■□□□□ 0.48
CCDC144A-202ENST00000340621 TEKT1Q969V4 418 aa18.04■□□□□ 0.48
CCDC144A-202ENST00000340621 SEC63Q9UGP8 760 aaKnown RBP18.04■□□□□ 0.48
CCDC144A-202ENST00000340621 PPP1R3GB7ZBB8 358 aa18.04■□□□□ 0.48
CCDC144A-202ENST00000340621 RIOK3O14730 519 aaKnown RBP18.04■□□□□ 0.48
CCDC144A-202ENST00000340621 GTF2F1P35269 517 aaKnown RBP eCLIP18.04■□□□□ 0.48
CCDC144A-202ENST00000340621 NFIAQ12857 509 aa18.04■□□□□ 0.48
CCDC144A-202ENST00000340621 CUL4BQ13620 913 aa18.04■□□□□ 0.48
CCDC144A-202ENST00000340621 KLHL10Q6JEL2 608 aa18.04■□□□□ 0.48
CCDC144A-202ENST00000340621 C2CD5Q86YS7 1000 aa18.04■□□□□ 0.48
CCDC144A-202ENST00000340621 LRRC47Q8N1G4 583 aaKnown RBP18.04■□□□□ 0.48
CCDC144A-202ENST00000340621 TSC1Q92574 1164 aa18.04■□□□□ 0.48
CCDC144A-202ENST00000340621 RIOX1Q9H6W3 641 aa18.04■□□□□ 0.48
CCDC144A-202ENST00000340621 PLIN4Q96Q06 1357 aa18.03■□□□□ 0.48
CCDC144A-202ENST00000340621 SLURP2P0DP57 97 aa18.03■□□□□ 0.48
CCDC144A-202ENST00000340621 SHMT1P34896 483 aa18.03■□□□□ 0.48
CCDC144A-202ENST00000340621 KARSQ15046 597 aaKnown RBP18.03■□□□□ 0.48
CCDC144A-202ENST00000340621 CT47A1Q5JQC4 288 aaPredicted RBP18.03■□□□□ 0.48
CCDC144A-202ENST00000340621 PODNQ7Z5L7 613 aa18.03■□□□□ 0.48
CCDC144A-202ENST00000340621 ZFPM1Q8IX07 1006 aa18.03■□□□□ 0.48
CCDC144A-202ENST00000340621 CCDC12Q8WUD4 166 aaPredicted RBP18.03■□□□□ 0.48
CCDC144A-202ENST00000340621 PYM1Q9BRP8 204 aaKnown RBP18.03■□□□□ 0.48
CCDC144A-202ENST00000340621 C6orf50Q9HD87 102 aa18.03■□□□□ 0.48
CCDC144A-202ENST00000340621 NRXN2Q9P2S2 1712 aa18.03■□□□□ 0.48
CCDC144A-202ENST00000340621 PP2D1A8MPX8 630 aa18.03■□□□□ 0.48
CCDC144A-202ENST00000340621 STX17P56962 302 aa18.03■□□□□ 0.48
CCDC144A-202ENST00000340621 KCND1Q9NSA2 647 aa18.03■□□□□ 0.48
CCDC144A-202ENST00000340621 PCDHAC2Q9Y5I4 1007 aa18.03■□□□□ 0.48
CCDC144A-202ENST00000340621 GNA11P29992 359 aa18.02■□□□□ 0.48
CCDC144A-202ENST00000340621 CRKP46108 304 aa18.02■□□□□ 0.48
CCDC144A-202ENST00000340621 DHX8Q14562 1220 aaKnown RBP18.02■□□□□ 0.48
CCDC144A-202ENST00000340621 E4F1Q66K89 784 aaPredicted RBP18.02■□□□□ 0.48
CCDC144A-202ENST00000340621 NYAP1Q6ZVC0 841 aa18.02■□□□□ 0.48
CCDC144A-202ENST00000340621 ZNF219Q9P2Y4 722 aaPredicted RBP18.02■□□□□ 0.48
CCDC144A-202ENST00000340621 SWAP70Q9UH65 585 aa18.02■□□□□ 0.48
CCDC144A-202ENST00000340621 MYH1P12882 1939 aa18.02■□□□□ 0.47
CCDC144A-202ENST00000340621 SNHG28P0DPA3 235 aa18.02■□□□□ 0.47
CCDC144A-202ENST00000340621 GOLGA8FQ08AF8 430 aa18.02■□□□□ 0.47
CCDC144A-202ENST00000340621 GOLGA8DPQ0D2H9 430 aa18.02■□□□□ 0.47
CCDC144A-202ENST00000340621 SOGA3Q5TF21 947 aa18.02■□□□□ 0.47
CCDC144A-202ENST00000340621 SPATA1Q5VX52 437 aa18.02■□□□□ 0.47
CCDC144A-202ENST00000340621 KRT25Q7Z3Z0 450 aa18.02■□□□□ 0.47
CCDC144A-202ENST00000340621 KIAA0825Q8IV33 1275 aa18.02■□□□□ 0.47
CCDC144A-202ENST00000340621 H0YIN7 160 aa18.01■□□□□ 0.47
CCDC144A-202ENST00000340621 GTPBP6O43824 516 aaPredicted RBP18.01■□□□□ 0.47
CCDC144A-202ENST00000340621 TTLL1O95922 423 aa18.01■□□□□ 0.47
CCDC144A-202ENST00000340621 TXLNAP40222 546 aa18.01■□□□□ 0.47
CCDC144A-202ENST00000340621 NONOQ15233 471 aaKnown RBP eCLIP18.01■□□□□ 0.47
CCDC144A-202ENST00000340621 LETM2Q2VYF4 491 aa18.01■□□□□ 0.47
CCDC144A-202ENST00000340621 CEP135Q66GS9 1140 aa18.01■□□□□ 0.47
CCDC144A-202ENST00000340621 GPCPD1Q9NPB8 672 aa18.01■□□□□ 0.47
CCDC144A-202ENST00000340621 BIN2Q9UBW5 565 aaPredicted RBP18.01■□□□□ 0.47
CCDC144A-202ENST00000340621 CCNT1O60563 726 aaKnown RBP18■□□□□ 0.47
CCDC144A-202ENST00000340621 STAT6P42226 847 aa18■□□□□ 0.47
CCDC144A-202ENST00000340621 CACNB3P54284 484 aa18■□□□□ 0.47
CCDC144A-202ENST00000340621 PTPN14Q15678 1187 aa18■□□□□ 0.47
CCDC144A-202ENST00000340621 ASPRV1Q53RT3 343 aa18■□□□□ 0.47
CCDC144A-202ENST00000340621 NAALADL2Q58DX5 795 aa18■□□□□ 0.47
CCDC144A-202ENST00000340621 ZDHHC15Q96MV8 337 aa18■□□□□ 0.47
CCDC144A-202ENST00000340621 DISC1Q9NRI5 854 aa18■□□□□ 0.47
CCDC144A-202ENST00000340621 LAD1O00515 517 aa18■□□□□ 0.47
CCDC144A-202ENST00000340621 NR1I3Q14994 352 aa18■□□□□ 0.47
CCDC144A-202ENST00000340621 COA7Q96BR5 231 aa18■□□□□ 0.47
CCDC144A-202ENST00000340621 TMX1Q9H3N1 280 aa18■□□□□ 0.47
CCDC144A-202ENST00000340621 COBLO75128 1261 aa17.99■□□□□ 0.47
CCDC144A-202ENST00000340621 CHRNA5P30532 468 aa17.99■□□□□ 0.47
CCDC144A-202ENST00000340621 PRPHP41219 470 aa17.99■□□□□ 0.47
CCDC144A-202ENST00000340621 UBA7P41226 1012 aa17.99■□□□□ 0.47
CCDC144A-202ENST00000340621 TBX2Q13207 712 aaPredicted RBP17.99■□□□□ 0.47
CCDC144A-202ENST00000340621 JAKMIP3Q5VZ66 844 aa17.99■□□□□ 0.47
CCDC144A-202ENST00000340621 APTXQ7Z2E3 356 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms