RNA–Protein interactions for RNA: ENST00000340434.4

PTAR1-201, Transcript of protein prenyltransferase alpha subunit repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTAR1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTAR1-201ENST00000340434 SLC4A3P48751 1232 aa13.06□□□□□ -0.32
PTAR1-201ENST00000340434 CDK8P49336 464 aa13.06□□□□□ -0.32
PTAR1-201ENST00000340434 MRPS5P82675 430 aaKnown RBP13.06□□□□□ -0.32
PTAR1-201ENST00000340434 PPIGQ13427 754 aaKnown RBP eCLIP13.06□□□□□ -0.323e-6■□□□□ 11.2
PTAR1-201ENST00000340434 TTF1Q15361 905 aaPredicted RBP13.06□□□□□ -0.32
PTAR1-201ENST00000340434 AKNAD1Q5T1N1 836 aa13.06□□□□□ -0.32
PTAR1-201ENST00000340434 ZKSCAN2Q63HK3 967 aa13.06□□□□□ -0.32
PTAR1-201ENST00000340434 UHRF1Q96T88 793 aaPredicted RBP13.06□□□□□ -0.32
PTAR1-201ENST00000340434 DNAJC2Q99543 621 aaKnown RBP13.06□□□□□ -0.32
PTAR1-201ENST00000340434 IL1RAPL2Q9NP60 686 aa13.06□□□□□ -0.32
PTAR1-201ENST00000340434 ZNF214Q9UL59 606 aaPredicted RBP13.06□□□□□ -0.32
PTAR1-201ENST00000340434 MYO9BQ13459 2157 aa13.05□□□□□ -0.32
PTAR1-201ENST00000340434 TCRBV5S4A2TA0A5A2 114 aa13.05□□□□□ -0.32
PTAR1-201ENST00000340434 MOXD2PA6NHM9 499 aa13.05□□□□□ -0.32
PTAR1-201ENST00000340434 APBB1O00213 710 aa13.05□□□□□ -0.32
PTAR1-201ENST00000340434 ASGR1P07306 291 aa13.05□□□□□ -0.32
PTAR1-201ENST00000340434 C6orf222P0C671 652 aaPredicted RBP13.05□□□□□ -0.32
PTAR1-201ENST00000340434 CDK7P50613 346 aa13.05□□□□□ -0.32
PTAR1-201ENST00000340434 FAM83BQ5T0W9 1011 aa13.05□□□□□ -0.32
PTAR1-201ENST00000340434 RASIP1Q5U651 963 aa13.05□□□□□ -0.32
PTAR1-201ENST00000340434 REPS2Q8NFH8 660 aa13.05□□□□□ -0.32
PTAR1-201ENST00000340434 GLT1D1Q96MS3 346 aa13.05□□□□□ -0.32
PTAR1-201ENST00000340434 PPP1R9AQ9ULJ8 1098 aa13.05□□□□□ -0.32
PTAR1-201ENST00000340434 RIPK3Q9Y572 518 aa13.05□□□□□ -0.32
PTAR1-201ENST00000340434 USP17L12C9JPN9 530 aa13.05□□□□□ -0.32
PTAR1-201ENST00000340434 USP17L21D6R901 530 aa13.05□□□□□ -0.32
PTAR1-201ENST00000340434 ADCY6O43306 1168 aa13.05□□□□□ -0.32
PTAR1-201ENST00000340434 ITPRIPQ8IWB1 547 aa13.05□□□□□ -0.32
PTAR1-201ENST00000340434 TMEM199Q8N511 208 aa13.05□□□□□ -0.32
PTAR1-201ENST00000340434 DDX11Q96FC9 970 aa13.05□□□□□ -0.32
PTAR1-201ENST00000340434 CCDC17Q96LX7 622 aa13.05□□□□□ -0.32
PTAR1-201ENST00000340434 NECAB3Q96P71 396 aaPredicted RBP13.05□□□□□ -0.32
PTAR1-201ENST00000340434 NUP88Q99567 741 aaPredicted RBP13.05□□□□□ -0.32
PTAR1-201ENST00000340434 NKX2-4Q9H2Z4 354 aa13.05□□□□□ -0.32
PTAR1-201ENST00000340434 CXXC1Q9P0U4 656 aaPredicted RBP13.05□□□□□ -0.32
PTAR1-201ENST00000340434 NCOR1O75376 2440 aa13.05□□□□□ -0.32
PTAR1-201ENST00000340434 ELP1O95163 1332 aa13.04□□□□□ -0.32
PTAR1-201ENST00000340434 CHD9Q3L8U1 2897 aa13.04□□□□□ -0.32
PTAR1-201ENST00000340434 ARVCFO00192 962 aa13.04□□□□□ -0.32
PTAR1-201ENST00000340434 DUSP11O75319 330 aaKnown RBP13.04□□□□□ -0.32
PTAR1-201ENST00000340434 MBD4O95243 580 aa13.04□□□□□ -0.32
PTAR1-201ENST00000340434 CYP2C18P33260 490 aa13.04□□□□□ -0.32
PTAR1-201ENST00000340434 ACVR2BQ13705 512 aa13.04□□□□□ -0.32
PTAR1-201ENST00000340434 GNASQ5JWF2 1037 aa13.04□□□□□ -0.32
PTAR1-201ENST00000340434 C12orf60Q5U649 245 aa13.04□□□□□ -0.32
PTAR1-201ENST00000340434 SNRNP48Q6IEG0 339 aaKnown RBP13.04□□□□□ -0.32
PTAR1-201ENST00000340434 CEP85Q6P2H3 762 aa13.04□□□□□ -0.32
PTAR1-201ENST00000340434 CCDC174Q6PII3 467 aa13.04□□□□□ -0.32
PTAR1-201ENST00000340434 KANSL2Q9H9L4 492 aa13.04□□□□□ -0.32
PTAR1-201ENST00000340434 GOPCQ9HD26 462 aa13.04□□□□□ -0.32
PTAR1-201ENST00000340434 MSRAQ9UJ68 235 aa13.04□□□□□ -0.32
PTAR1-201ENST00000340434 ROBO3Q96MS0 1386 aa13.03□□□□□ -0.32
PTAR1-201ENST00000340434 A0A0G2JMZ2 1700 aa13.03□□□□□ -0.32
PTAR1-201ENST00000340434 CHGBP05060 677 aa13.03□□□□□ -0.32
PTAR1-201ENST00000340434 RLBP1P12271 317 aa13.03□□□□□ -0.32
PTAR1-201ENST00000340434 CCDC144BQ3MJ40 725 aa13.03□□□□□ -0.32
PTAR1-201ENST00000340434 PSRC1Q6PGN9 363 aaPredicted RBP13.03□□□□□ -0.32
PTAR1-201ENST00000340434 MAMDC4Q6UXC1 1216 aa13.03□□□□□ -0.32
PTAR1-201ENST00000340434 FTSJ3Q8IY81 847 aaKnown RBP13.03□□□□□ -0.32
PTAR1-201ENST00000340434 CPXCR1Q8N123 301 aa13.03□□□□□ -0.32
PTAR1-201ENST00000340434 MSL3Q8N5Y2 521 aaKnown RBP13.03□□□□□ -0.32
PTAR1-201ENST00000340434 PCSK9Q8NBP7 692 aaKnown RBP13.03□□□□□ -0.32
PTAR1-201ENST00000340434 IL27Q8NEV9 243 aa13.03□□□□□ -0.32
PTAR1-201ENST00000340434 TEX13BQ9BXU2 312 aa13.03□□□□□ -0.32
PTAR1-201ENST00000340434 SLC28A3Q9HAS3 691 aa13.03□□□□□ -0.32
PTAR1-201ENST00000340434 ATP8A2Q9NTI2 1148 aa13.03□□□□□ -0.32
PTAR1-201ENST00000340434 YBX2Q9Y2T7 364 aaKnown RBP13.03□□□□□ -0.32
PTAR1-201ENST00000340434 MROH7Q68CQ1 1323 aa13.03□□□□□ -0.32
PTAR1-201ENST00000340434 SYNGAP1Q96PV0 1343 aa13.03□□□□□ -0.32
PTAR1-201ENST00000340434 BDP1A6H8Y1 2624 aa13.02□□□□□ -0.33
PTAR1-201ENST00000340434 DNAJC25-GNG10A0A024R161 153 aa13.02□□□□□ -0.33
PTAR1-201ENST00000340434 A0A0U1RQG5 324 aaPredicted RBP13.02□□□□□ -0.33
PTAR1-201ENST00000340434 FGBP02675 491 aa13.02□□□□□ -0.33
PTAR1-201ENST00000340434 CST5P28325 142 aaPredicted RBP13.02□□□□□ -0.33
PTAR1-201ENST00000340434 COPB2P35606 906 aa13.02□□□□□ -0.33
PTAR1-201ENST00000340434 C16orf86Q6ZW13 317 aa13.02□□□□□ -0.33
PTAR1-201ENST00000340434 OTOP2Q7RTS6 562 aa13.02□□□□□ -0.33
PTAR1-201ENST00000340434 FAM126BQ8IXS8 530 aa13.02□□□□□ -0.33
PTAR1-201ENST00000340434 MICALL1Q8N3F8 863 aa13.02□□□□□ -0.33
PTAR1-201ENST00000340434 RHPN1Q8TCX5 695 aa13.02□□□□□ -0.33
PTAR1-201ENST00000340434 SLF1Q9BQI6 1058 aa13.02□□□□□ -0.33
PTAR1-201ENST00000340434 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.02□□□□□ -0.33
PTAR1-201ENST00000340434 SPC25Q9HBM1 224 aa13.02□□□□□ -0.33
PTAR1-201ENST00000340434 IL23AQ9NPF7 189 aa13.02□□□□□ -0.33
PTAR1-201ENST00000340434 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.02□□□□□ -0.33
PTAR1-201ENST00000340434 UMODL1Q5DID0 1318 aa13.02□□□□□ -0.33
PTAR1-201ENST00000340434 RABGGTBP53611 331 aa13.01□□□□□ -0.33
PTAR1-201ENST00000340434 GJA9P57773 515 aa13.01□□□□□ -0.33
PTAR1-201ENST00000340434 BEX3Q00994 111 aa13.01□□□□□ -0.33
PTAR1-201ENST00000340434 TFF2Q03403 129 aa13.01□□□□□ -0.33
PTAR1-201ENST00000340434 RAB30Q15771 203 aa13.01□□□□□ -0.33
PTAR1-201ENST00000340434 ERC1Q8IUD2 1116 aa13.01□□□□□ -0.33
PTAR1-201ENST00000340434 STK11IPQ8N1F8 1099 aa13.01□□□□□ -0.33
PTAR1-201ENST00000340434 HERVK_113Q902F9 699 aa13.01□□□□□ -0.33
PTAR1-201ENST00000340434 CHD7Q9P2D1 2997 aa13.01□□□□□ -0.33
PTAR1-201ENST00000340434 CTAGE5O15320 804 aa13□□□□□ -0.33
PTAR1-201ENST00000340434 TLR3O15455 904 aaKnown RBP13□□□□□ -0.33
PTAR1-201ENST00000340434 MYOGP15173 224 aa13□□□□□ -0.33
PTAR1-201ENST00000340434 ADD2P35612 726 aa13□□□□□ -0.33
PTAR1-201ENST00000340434 CCL23P55773 120 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms