RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 OFD1O75665 1012 aa11.54□□□□□ -0.56
RBFOX1-202ENST00000340209 IDEP14735 1019 aa11.54□□□□□ -0.56
RBFOX1-202ENST00000340209 SFPQP23246 707 aaKnown RBP eCLIP11.54□□□□□ -0.56
RBFOX1-202ENST00000340209 FMR1Q06787 632 aaKnown RBP eCLIP11.54□□□□□ -0.56
RBFOX1-202ENST00000340209 TBCKQ8TEA7 893 aa11.54□□□□□ -0.56
RBFOX1-202ENST00000340209 CDK5RAP3Q96JB5 506 aa11.54□□□□□ -0.56
RBFOX1-202ENST00000340209 OSBPL5Q9H0X9 879 aaPredicted RBP11.54□□□□□ -0.56
RBFOX1-202ENST00000340209 PODXL2Q9NZ53 605 aa11.54□□□□□ -0.56
RBFOX1-202ENST00000340209 THSD7AQ9UPZ6 1657 aa11.54□□□□□ -0.56
RBFOX1-202ENST00000340209 REXO1Q8N1G1 1221 aaKnown RBP11.54□□□□□ -0.56
RBFOX1-202ENST00000340209 APOBEC3HQ6NTF7 200 aaKnown RBP11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 GJA3Q9Y6H8 435 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 PLSCR1O15162 318 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 GH2P01242 217 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 CUL4BQ13620 913 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 PLA2G4DQ86XP0 818 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 OGFOD1Q8N543 542 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 CNKSR1Q969H4 720 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 MTMR4Q9NYA4 1195 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 PCDHA6Q9UN73 950 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 PCDHA8Q9Y5H6 950 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 USP17L15C9J2P7 530 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 USP17L13C9JLJ4 530 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 USP17L11C9JVI0 530 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 USP17L18D6R9N7 530 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 USP17L22D6RA61 530 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 USP17L17D6RBQ6 530 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 USP17L19D6RCP7 530 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 USP17L20D6RJB6 530 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 UBXN2AP68543 259 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 ICA1Q05084 483 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 USP17L24Q0WX57 530 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 USP17L6PQ6QN14 398 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 FCHSD1Q86WN1 690 aa11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 PRMT6Q96LA8 375 aaPredicted RBP11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 V9GYY5 206 aaPredicted RBP11.53□□□□□ -0.56
RBFOX1-202ENST00000340209 USP27XA6NNY8 438 aa11.52□□□□□ -0.56
RBFOX1-202ENST00000340209 TTLL1O95922 423 aa11.52□□□□□ -0.56
RBFOX1-202ENST00000340209 PDHBP11177 359 aa11.52□□□□□ -0.56
RBFOX1-202ENST00000340209 EEF2P13639 858 aaKnown RBP11.52□□□□□ -0.56
RBFOX1-202ENST00000340209 DPEP1P16444 411 aa11.52□□□□□ -0.56
RBFOX1-202ENST00000340209 NONOQ15233 471 aaKnown RBP eCLIP11.52□□□□□ -0.56
RBFOX1-202ENST00000340209 PAGE5Q96GU1 130 aa11.52□□□□□ -0.56
RBFOX1-202ENST00000340209 POLD4Q9HCU8 107 aa11.52□□□□□ -0.56
RBFOX1-202ENST00000340209 HPSEQ9Y251 543 aa11.52□□□□□ -0.56
RBFOX1-202ENST00000340209 STXBP3O00186 592 aa11.52□□□□□ -0.57
RBFOX1-202ENST00000340209 BMP6P22004 513 aa11.52□□□□□ -0.57
RBFOX1-202ENST00000340209 NPY5RQ15761 445 aa11.52□□□□□ -0.57
RBFOX1-202ENST00000340209 DYMQ7RTS9 669 aa11.52□□□□□ -0.57
RBFOX1-202ENST00000340209 CDAN1Q8IWY9 1227 aa11.52□□□□□ -0.57
RBFOX1-202ENST00000340209 HPS3Q969F9 1004 aa11.52□□□□□ -0.57
RBFOX1-202ENST00000340209 BCS1LQ9Y276 419 aa11.52□□□□□ -0.57
RBFOX1-202ENST00000340209 GDAQ9Y2T3 454 aa11.52□□□□□ -0.57
RBFOX1-202ENST00000340209 PDS5AQ29RF7 1337 aaKnown RBP11.52□□□□□ -0.57
RBFOX1-202ENST00000340209 NRDCO43847 1150 aa11.52□□□□□ -0.57
RBFOX1-202ENST00000340209 TDP2O95551 362 aa11.52□□□□□ -0.57
RBFOX1-202ENST00000340209 POTEDQ86YR6 584 aa11.52□□□□□ -0.57
RBFOX1-202ENST00000340209 IQUBQ8NA54 791 aa11.52□□□□□ -0.57
RBFOX1-202ENST00000340209 PCMTD1Q96MG8 357 aaPredicted RBP11.52□□□□□ -0.57
RBFOX1-202ENST00000340209 PSDA5PKW4 1024 aaPredicted RBP11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 TNNT1P13805 278 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 BAG6P46379 1132 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 ADCY7P51828 1080 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 ADKP55263 362 aaKnown RBP11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 PRKG1Q13976 671 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 CCDC174Q6PII3 467 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 PODNQ7Z5L7 613 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 TCP11L1Q9NUJ3 509 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 BARHL2Q9NY43 387 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 ARAP2Q8WZ64 1704 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 POTEMA6NI47 508 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 RGL2O15211 777 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 ZNF500O60304 480 aaPredicted RBP11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 NEMFO60524 1076 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 CAVIN2O95810 425 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 ASIC1P78348 528 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 SLFN13Q68D06 897 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 ADGRF4Q8IZF3 695 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 MTA3Q9BTC8 594 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 VPS16Q9H269 839 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 PKD2L1Q9P0L9 805 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 BRWD3Q6RI45 1802 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 DOCK2Q92608 1830 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 FGRP09769 529 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 SHMT1P34896 483 aa11.51□□□□□ -0.57
RBFOX1-202ENST00000340209 SHTN1A0MZ66 631 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 ACTN4O43707 911 aaKnown RBP11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 GNA11P29992 359 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 HOXA13P31271 388 aaPredicted RBP11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 CACNB1Q02641 598 aaPredicted RBP11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 DLGAP5Q15398 846 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 IL17AQ16552 155 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 SLC30A10Q6XR72 485 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 TMC4Q7Z404 712 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 TTLL6Q8N841 843 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 CCDC12Q8WUD4 166 aaPredicted RBP11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 FERMT2Q96AC1 680 aa11.5□□□□□ -0.57
RBFOX1-202ENST00000340209 FEZ1Q99689 392 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms