RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 EHBP1Q8NDI1 1231 aa12.4□□□□□ -0.43
SEMA4D-201ENST00000339861 KIAA0754O94854 1291 aa12.39□□□□□ -0.43
SEMA4D-201ENST00000339861 RAPGEF1Q13905 1077 aa12.39□□□□□ -0.43
SEMA4D-201ENST00000339861 RNF187Q5TA31 235 aaPredicted RBP12.39□□□□□ -0.43
SEMA4D-201ENST00000339861 SV2BQ7L1I2 683 aa12.39□□□□□ -0.43
SEMA4D-201ENST00000339861 ADGRG1Q9Y653 693 aa12.39□□□□□ -0.43
SEMA4D-201ENST00000339861 SALL1Q9NSC2 1324 aa12.39□□□□□ -0.43
SEMA4D-201ENST00000339861 LRRC47Q8N1G4 583 aaKnown RBP12.39□□□□□ -0.43
SEMA4D-201ENST00000339861 PLCD3Q8N3E9 789 aa12.39□□□□□ -0.43
SEMA4D-201ENST00000339861 HPS3Q969F9 1004 aa12.39□□□□□ -0.43
SEMA4D-201ENST00000339861 CHP1Q99653 195 aa12.39□□□□□ -0.43
SEMA4D-201ENST00000339861 LRWD1Q9UFC0 647 aa12.39□□□□□ -0.43
SEMA4D-201ENST00000339861 PARP3Q9Y6F1 533 aa12.39□□□□□ -0.43
SEMA4D-201ENST00000339861 SETQ01105 290 aaPredicted RBP12.39□□□□□ -0.43
SEMA4D-201ENST00000339861 CACNB1Q02641 598 aaPredicted RBP12.39□□□□□ -0.43
SEMA4D-201ENST00000339861 USP17L2Q6R6M4 530 aa12.39□□□□□ -0.43
SEMA4D-201ENST00000339861 TAX1BP1Q86VP1 789 aa12.39□□□□□ -0.43
SEMA4D-201ENST00000339861 REXO1L1PQ8IX06 675 aa12.39□□□□□ -0.43
SEMA4D-201ENST00000339861 KLHL34Q8N239 644 aa12.39□□□□□ -0.43
SEMA4D-201ENST00000339861 TUBGCP2Q9BSJ2 902 aa12.39□□□□□ -0.43
SEMA4D-201ENST00000339861 NAA15Q9BXJ9 866 aaKnown RBP12.39□□□□□ -0.43
SEMA4D-201ENST00000339861 A0A0U1RQJ8 604 aa12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 BICDL2A1A5D9 508 aa12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 UFL1O94874 794 aa12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 USP8P40818 1118 aa12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 PRCPP42785 496 aa12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 NONOQ15233 471 aaKnown RBP eCLIP12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 SNX29Q8TEQ0 813 aa12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 ATRIPQ8WXE1 791 aa12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 GOPCQ9HD26 462 aa12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 SHTN1A0MZ66 631 aa12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 GNA11P29992 359 aa12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 FCHSD1Q86WN1 690 aa12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 SECISBP2LQ93073 1101 aaKnown RBP12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 MAP3K14Q99558 947 aa12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 CCDC113Q9H0I3 377 aa12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 RGPD8O14715 1765 aaPredicted RBP12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 KCNQ2O43526 872 aa12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 FGFR1OPO95684 399 aaKnown RBP12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 MAGEA1P43355 309 aa12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 TRIM28Q13263 835 aaKnown RBP12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 EARS2Q5JPH6 523 aaKnown RBP12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 IFIH1Q9BYX4 1025 aaKnown RBP12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.38□□□□□ -0.43
SEMA4D-201ENST00000339861 PRPF3O43395 683 aaKnown RBP12.37□□□□□ -0.43
SEMA4D-201ENST00000339861 CD44P16070 742 aaKnown RBP12.37□□□□□ -0.43
SEMA4D-201ENST00000339861 MCM3P25205 808 aa12.37□□□□□ -0.43
SEMA4D-201ENST00000339861 NTRK3Q16288 839 aa12.37□□□□□ -0.43
SEMA4D-201ENST00000339861 DCAF17Q5H9S7 520 aaPredicted RBP12.37□□□□□ -0.43
SEMA4D-201ENST00000339861 STAG2Q8N3U4 1231 aa12.37□□□□□ -0.43
SEMA4D-201ENST00000339861 SRBD1Q8N5C6 995 aaKnown RBP12.37□□□□□ -0.43
SEMA4D-201ENST00000339861 NBPF3Q9H094 633 aa12.37□□□□□ -0.43
SEMA4D-201ENST00000339861 RTCBQ9Y3I0 505 aaKnown RBP12.37□□□□□ -0.43
SEMA4D-201ENST00000339861 PLS1Q14651 629 aa12.37□□□□□ -0.43
SEMA4D-201ENST00000339861 BRD3Q15059 726 aa12.37□□□□□ -0.43
SEMA4D-201ENST00000339861 PPP2R5BQ15173 497 aa12.37□□□□□ -0.43
SEMA4D-201ENST00000339861 CNOT6LQ96LI5 555 aaKnown RBP12.37□□□□□ -0.43
SEMA4D-201ENST00000339861 EYA3Q99504 573 aa12.37□□□□□ -0.43
SEMA4D-201ENST00000339861 TMTC3Q6ZXV5 915 aa12.37□□□□□ -0.43
SEMA4D-201ENST00000339861 MICALL1Q8N3F8 863 aa12.37□□□□□ -0.43
SEMA4D-201ENST00000339861 POLD4Q9HCU8 107 aa12.37□□□□□ -0.43
SEMA4D-201ENST00000339861 FAM217BQ9NTX9 383 aaPredicted RBP12.37□□□□□ -0.43
SEMA4D-201ENST00000339861 H7C1D1 291 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 NDUFA10O95299 355 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 BMP6P22004 513 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 TCP11X2Q5H9J9 407 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 LRP10Q7Z4F1 713 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 AFAP1L1Q8TED9 768 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 ADAM21Q9UKJ8 722 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 HPSEQ9Y251 543 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 MRFAP1Q9Y605 127 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 NRXN3Q9Y4C0 1643 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 HSF2BPO75031 334 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 SLC7A5Q01650 507 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 C2orf54Q08AI8 447 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 TRIM14Q14142 442 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 ADGRA1Q86SQ6 560 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 KLHL7Q8IXQ5 586 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 PIK3C2AO00443 1686 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 TTC26A0AVF1 554 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 PLCG1P19174 1290 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 CALCRLQ16602 461 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 ZNF804AQ7Z570 1209 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 REXO1Q8N1G1 1221 aaKnown RBP12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 COA7Q96BR5 231 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 ABHD10Q9NUJ1 306 aa12.36□□□□□ -0.43
SEMA4D-201ENST00000339861 ACTN4O43707 911 aaKnown RBP12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 HPDP32754 393 aaPredicted RBP12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 GSTO1P78417 241 aa12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 HERC4Q5GLZ8 1057 aaPredicted RBP12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 PANX2Q96RD6 677 aa12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 ANKRD2Q9GZV1 360 aa12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 FAM204AQ9H8W3 233 aa12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 KANSL2Q9H9L4 492 aa12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 CCDC151A5D8V7 595 aa12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 KLRK1P26718 216 aa12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 GUCY2FP51841 1108 aa12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 TCP10Q12799 353 aa12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 UBE4AQ14139 1066 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms