RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 ARPP21Q9UBL0 812 aaPredicted RBP18.54■□□□□ 0.56
LITAF-201ENST00000339430 GPR75-ASB3A0A0A6YYF3 556 aa18.54■□□□□ 0.56
LITAF-201ENST00000339430 ZNF18P17022 549 aa18.54■□□□□ 0.56
LITAF-201ENST00000339430 KCNJ6P48051 423 aa18.54■□□□□ 0.56
LITAF-201ENST00000339430 SCNN1DP51172 638 aa18.54■□□□□ 0.56
LITAF-201ENST00000339430 STX17P56962 302 aa18.54■□□□□ 0.56
LITAF-201ENST00000339430 PPP4CP60510 307 aa18.54■□□□□ 0.56
LITAF-201ENST00000339430 SMYD4Q8IYR2 804 aaPredicted RBP18.54■□□□□ 0.56
LITAF-201ENST00000339430 TRIML1Q8N9V2 468 aa18.54■□□□□ 0.56
LITAF-201ENST00000339430 PAGE5Q96GU1 130 aa18.54■□□□□ 0.56
LITAF-201ENST00000339430 MYO1BO43795 1136 aa18.53■□□□□ 0.56
LITAF-201ENST00000339430 PLCD1P51178 756 aa18.53■□□□□ 0.56
LITAF-201ENST00000339430 KIAA0825Q8IV33 1275 aa18.53■□□□□ 0.56
LITAF-201ENST00000339430 SPATA20Q8TB22 786 aa18.53■□□□□ 0.56
LITAF-201ENST00000339430 FAM163AQ96GL9 167 aaPredicted RBP18.53■□□□□ 0.56
LITAF-201ENST00000339430 TMX1Q9H3N1 280 aa18.53■□□□□ 0.56
LITAF-201ENST00000339430 COL4A5P29400 1685 aa18.53■□□□□ 0.56
LITAF-201ENST00000339430 SCG2P13521 617 aa18.53■□□□□ 0.56
LITAF-201ENST00000339430 ADKP55263 362 aaKnown RBP18.53■□□□□ 0.56
LITAF-201ENST00000339430 SRCAPQ6ZRS2 3230 aa18.53■□□□□ 0.56
LITAF-201ENST00000339430 DYNLL2Q96FJ2 89 aa18.53■□□□□ 0.56
LITAF-201ENST00000339430 TAOK3Q9H2K8 898 aa18.53■□□□□ 0.56
LITAF-201ENST00000339430 MTMR7Q9Y216 660 aa18.53■□□□□ 0.56
LITAF-201ENST00000339430 DAGLAQ9Y4D2 1042 aa18.53■□□□□ 0.56
LITAF-201ENST00000339430 GAKO14976 1311 aa18.52■□□□□ 0.56
LITAF-201ENST00000339430 SLFN14P0C7P3 912 aa18.52■□□□□ 0.56
LITAF-201ENST00000339430 CD44P16070 742 aaKnown RBP18.52■□□□□ 0.56
LITAF-201ENST00000339430 MCM7P33993 719 aa18.52■□□□□ 0.56
LITAF-201ENST00000339430 TFAP4Q01664 338 aa18.52■□□□□ 0.56
LITAF-201ENST00000339430 RCSD1Q6JBY9 416 aa18.52■□□□□ 0.56
LITAF-201ENST00000339430 FERMT2Q96AC1 680 aa18.52■□□□□ 0.56
LITAF-201ENST00000339430 SLU7O95391 586 aaKnown RBP18.52■□□□□ 0.55
LITAF-201ENST00000339430 USP5P45974 858 aa18.52■□□□□ 0.55
LITAF-201ENST00000339430 GPKOWQ92917 476 aaPredicted RBP eCLIP18.52■□□□□ 0.55
LITAF-201ENST00000339430 DNAI1Q9UI46 699 aa18.52■□□□□ 0.55
LITAF-201ENST00000339430 UTRNP46939 3433 aa18.51■□□□□ 0.55
LITAF-201ENST00000339430 COBLO75128 1261 aa18.51■□□□□ 0.55
LITAF-201ENST00000339430 ELF2Q15723 593 aa18.51■□□□□ 0.55
LITAF-201ENST00000339430 SBK1Q52WX2 424 aa18.51■□□□□ 0.55
LITAF-201ENST00000339430 TMEM139Q8IV31 216 aa18.51■□□□□ 0.55
LITAF-201ENST00000339430 TGFBRAP1Q8WUH2 860 aa18.51■□□□□ 0.55
LITAF-201ENST00000339430 NFKBIEO00221 500 aa18.5■□□□□ 0.55
LITAF-201ENST00000339430 FKBP1AP62942 108 aaKnown RBP18.5■□□□□ 0.55
LITAF-201ENST00000339430 ATP2C1P98194 919 aaPredicted RBP18.5■□□□□ 0.55
LITAF-201ENST00000339430 TBX2Q13207 712 aaPredicted RBP18.5■□□□□ 0.55
LITAF-201ENST00000339430 PFKFB3Q16875 520 aaPredicted RBP18.5■□□□□ 0.55
LITAF-201ENST00000339430 SPECC1LQ69YQ0 1117 aa18.5■□□□□ 0.55
LITAF-201ENST00000339430 FAM177A1Q8N128 213 aaPredicted RBP18.5■□□□□ 0.55
LITAF-201ENST00000339430 LRRN4CLQ8ND94 238 aa18.5■□□□□ 0.55
LITAF-201ENST00000339430 ERO1AQ96HE7 468 aa18.5■□□□□ 0.55
LITAF-201ENST00000339430 CCDC34Q96HJ3 373 aa18.5■□□□□ 0.55
LITAF-201ENST00000339430 VPS33BQ9H267 617 aa18.5■□□□□ 0.55
LITAF-201ENST00000339430 BLZF1Q9H2G9 400 aa18.5■□□□□ 0.55
LITAF-201ENST00000339430 KAT14Q9H8E8 782 aa18.5■□□□□ 0.55
LITAF-201ENST00000339430 ZNF646O15015 1829 aaPredicted RBP18.5■□□□□ 0.55
LITAF-201ENST00000339430 FER1L6Q2WGJ9 1857 aa18.5■□□□□ 0.55
LITAF-201ENST00000339430 RAD17O75943 681 aa18.5■□□□□ 0.55
LITAF-201ENST00000339430 SH3RF1Q7Z6J0 888 aa18.5■□□□□ 0.55
LITAF-201ENST00000339430 STAG2Q8N3U4 1231 aa18.5■□□□□ 0.55
LITAF-201ENST00000339430 FHDC1Q9C0D6 1143 aaPredicted RBP18.5■□□□□ 0.55
LITAF-201ENST00000339430 IL17RBQ9NRM6 502 aa18.5■□□□□ 0.55
LITAF-201ENST00000339430 CGNQ9P2M7 1197 aaKnown RBP18.5■□□□□ 0.55
LITAF-201ENST00000339430 BMP15O95972 392 aa18.49■□□□□ 0.55
LITAF-201ENST00000339430 RHBDL3P58872 404 aa18.49■□□□□ 0.55
LITAF-201ENST00000339430 DPYDQ12882 1025 aa18.49■□□□□ 0.55
LITAF-201ENST00000339430 NIM1KQ8IY84 436 aa18.49■□□□□ 0.55
LITAF-201ENST00000339430 TEX11Q8IYF3 940 aa18.49■□□□□ 0.55
LITAF-201ENST00000339430 TC2NQ8N9U0 490 aa18.49■□□□□ 0.55
LITAF-201ENST00000339430 RASGRP4Q8TDF6 673 aa18.49■□□□□ 0.55
LITAF-201ENST00000339430 TEKT1Q969V4 418 aa18.49■□□□□ 0.55
LITAF-201ENST00000339430 BAG1Q99933 345 aaPredicted RBP18.49■□□□□ 0.55
LITAF-201ENST00000339430 ZMYND15Q9H091 742 aa18.49■□□□□ 0.55
LITAF-201ENST00000339430 SYNRGQ9UMZ2 1314 aa18.49■□□□□ 0.55
LITAF-201ENST00000339430 TEX33O43247 280 aa18.49■□□□□ 0.55
LITAF-201ENST00000339430 PLCG2P16885 1265 aa18.49■□□□□ 0.55
LITAF-201ENST00000339430 ERCC5P28715 1186 aaPredicted RBP18.49■□□□□ 0.55
LITAF-201ENST00000339430 IL17AQ16552 155 aa18.49■□□□□ 0.55
LITAF-201ENST00000339430 CERS3Q8IU89 383 aa18.49■□□□□ 0.55
LITAF-201ENST00000339430 MAPKAPK5Q8IW41 473 aa18.49■□□□□ 0.55
LITAF-201ENST00000339430 REXO1L1PQ8IX06 675 aa18.49■□□□□ 0.55
LITAF-201ENST00000339430 MKRN1Q9UHC7 482 aaKnown RBP18.49■□□□□ 0.55
LITAF-201ENST00000339430 ETF1P62495 437 aaKnown RBP18.48■□□□□ 0.55
LITAF-201ENST00000339430 C12orf60Q5U649 245 aa18.48■□□□□ 0.55
LITAF-201ENST00000339430 HHIPL2Q6UWX4 724 aa18.48■□□□□ 0.55
LITAF-201ENST00000339430 SLC44A5Q8NCS7 719 aa18.48■□□□□ 0.55
LITAF-201ENST00000339430 PNMA1Q8ND90 353 aa18.48■□□□□ 0.55
LITAF-201ENST00000339430 MKNK2Q9HBH9 465 aa18.48■□□□□ 0.55
LITAF-201ENST00000339430 ZNRF3Q9ULT6 936 aa18.48■□□□□ 0.55
LITAF-201ENST00000339430 ADAMTSL1Q8N6G6 1762 aa18.48■□□□□ 0.55
LITAF-201ENST00000339430 ARHGAP6O43182 974 aa18.48■□□□□ 0.55
LITAF-201ENST00000339430 CCP110O43303 1012 aa18.48■□□□□ 0.55
LITAF-201ENST00000339430 CDC25AP30304 524 aa18.48■□□□□ 0.55
LITAF-201ENST00000339430 KIF5BP33176 963 aa18.48■□□□□ 0.55
LITAF-201ENST00000339430 CRKP46108 304 aa18.48■□□□□ 0.55
LITAF-201ENST00000339430 NR1I3Q14994 352 aa18.48■□□□□ 0.55
LITAF-201ENST00000339430 TRIM65Q6PJ69 517 aa18.48■□□□□ 0.55
LITAF-201ENST00000339430 MORC2Q9Y6X9 1032 aaPredicted RBP18.48■□□□□ 0.55
LITAF-201ENST00000339430 PSMD14O00487 310 aa18.47■□□□□ 0.55
LITAF-201ENST00000339430 FANCGO15287 622 aa18.47■□□□□ 0.55
LITAF-201ENST00000339430 CUL4BQ13620 913 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms