RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 IQCEQ6IPM2 695 aa22.79■■□□□ 1.24
RUNX3-202ENST00000338888 OTUD6BQ8N6M0 293 aa22.79■■□□□ 1.24
RUNX3-202ENST00000338888 POLD4Q9HCU8 107 aa22.79■■□□□ 1.24
RUNX3-202ENST00000338888 CCDC196A0A1B0GTZ2 297 aa22.78■■□□□ 1.24
RUNX3-202ENST00000338888 PATL2C9JE40 543 aaKnown RBP22.78■■□□□ 1.24
RUNX3-202ENST00000338888 ATP1A2P50993 1020 aa22.78■■□□□ 1.24
RUNX3-202ENST00000338888 TCIRG1Q13488 830 aa22.78■■□□□ 1.24
RUNX3-202ENST00000338888 JPH2Q9BR39 696 aaPredicted RBP22.78■■□□□ 1.24
RUNX3-202ENST00000338888 AGPAT5Q9NUQ2 364 aa22.78■■□□□ 1.24
RUNX3-202ENST00000338888 MYH7P12883 1935 aa22.78■■□□□ 1.24
RUNX3-202ENST00000338888 IFIT5Q13325 482 aaKnown RBP22.78■■□□□ 1.24
RUNX3-202ENST00000338888 ZNF658Q5TYW1 1059 aaPredicted RBP22.78■■□□□ 1.24
RUNX3-202ENST00000338888 CREG2Q8IUH2 290 aa22.78■■□□□ 1.24
RUNX3-202ENST00000338888 FAM89AQ96GI7 184 aa22.78■■□□□ 1.24
RUNX3-202ENST00000338888 RUFY1Q96T51 708 aa22.78■■□□□ 1.24
RUNX3-202ENST00000338888 KRT23Q9C075 422 aa22.78■■□□□ 1.24
RUNX3-202ENST00000338888 CNNM2Q9H8M5 875 aa22.78■■□□□ 1.24
RUNX3-202ENST00000338888 LAMB4A4D0S4 1761 aa22.78■■□□□ 1.24
RUNX3-202ENST00000338888 ANO9A1A5B4 782 aa22.78■■□□□ 1.24
RUNX3-202ENST00000338888 ERICH2A1L162 156 aa22.78■■□□□ 1.24
RUNX3-202ENST00000338888 ZEB2O60315 1214 aa22.78■■□□□ 1.24
RUNX3-202ENST00000338888 KIAA0754O94854 1291 aa22.78■■□□□ 1.24
RUNX3-202ENST00000338888 CCDC172P0C7W6 258 aa22.78■■□□□ 1.24
RUNX3-202ENST00000338888 CYLC1P35663 651 aaPredicted RBP22.78■■□□□ 1.24
RUNX3-202ENST00000338888 KRT2P35908 639 aa22.78■■□□□ 1.24
RUNX3-202ENST00000338888 FNTAP49354 379 aa22.78■■□□□ 1.24
RUNX3-202ENST00000338888 KCTD16Q68DU8 428 aa22.78■■□□□ 1.24
RUNX3-202ENST00000338888 SH2D3CQ8N5H7 860 aa22.78■■□□□ 1.24
RUNX3-202ENST00000338888 ZCRB1Q8TBF4 217 aaKnown RBP22.78■■□□□ 1.24
RUNX3-202ENST00000338888 SMCR8Q8TEV9 937 aaPredicted RBP22.78■■□□□ 1.24
RUNX3-202ENST00000338888 CABS1Q96KC9 395 aa22.78■■□□□ 1.24
RUNX3-202ENST00000338888 NHEJ1Q9H9Q4 299 aaPredicted RBP22.78■■□□□ 1.24
RUNX3-202ENST00000338888 LGALS16A8MUM7 142 aa22.77■■□□□ 1.24
RUNX3-202ENST00000338888 IPO7O95373 1038 aaKnown RBP22.77■■□□□ 1.24
RUNX3-202ENST00000338888 SETQ01105 290 aaPredicted RBP22.77■■□□□ 1.24
RUNX3-202ENST00000338888 PTGDRQ13258 359 aa22.77■■□□□ 1.24
RUNX3-202ENST00000338888 B4GALNT4Q76KP1 1039 aa22.77■■□□□ 1.24
RUNX3-202ENST00000338888 ZNF654Q8IZM8 581 aa22.77■■□□□ 1.24
RUNX3-202ENST00000338888 MMGT1Q8N4V1 131 aa22.77■■□□□ 1.24
RUNX3-202ENST00000338888 FBXO3Q9UK99 471 aa22.77■■□□□ 1.24
RUNX3-202ENST00000338888 COL5A2P05997 1499 aaPredicted RBP22.77■■□□□ 1.24
RUNX3-202ENST00000338888 TCRBV5S4A2TA0A5A2 114 aa22.77■■□□□ 1.23
RUNX3-202ENST00000338888 MBD4O95243 580 aa22.77■■□□□ 1.23
RUNX3-202ENST00000338888 ALX1Q15699 326 aa22.77■■□□□ 1.23
RUNX3-202ENST00000338888 ARMT1Q9H993 441 aa22.77■■□□□ 1.23
RUNX3-202ENST00000338888 ATRNO75882 1429 aa22.76■■□□□ 1.23
RUNX3-202ENST00000338888 TJP1Q07157 1748 aa22.76■■□□□ 1.23
RUNX3-202ENST00000338888 H7C1D1 291 aa22.76■■□□□ 1.23
RUNX3-202ENST00000338888 GTPBP6O43824 516 aaPredicted RBP22.76■■□□□ 1.23
RUNX3-202ENST00000338888 SKOR1P84550 965 aa22.76■■□□□ 1.23
RUNX3-202ENST00000338888 PDXDC2PQ6P474 469 aa22.76■■□□□ 1.23
RUNX3-202ENST00000338888 ZNF662Q6ZS27 426 aa22.76■■□□□ 1.23
RUNX3-202ENST00000338888 PRKAB2O43741 272 aa22.76■■□□□ 1.23
RUNX3-202ENST00000338888 RPN1P04843 607 aaKnown RBP22.76■■□□□ 1.23
RUNX3-202ENST00000338888 LDHAL6AQ6ZMR3 332 aa22.76■■□□□ 1.23
RUNX3-202ENST00000338888 ZNF507Q8TCN5 953 aa22.76■■□□□ 1.23
RUNX3-202ENST00000338888 PSMB7Q99436 277 aa22.76■■□□□ 1.23
RUNX3-202ENST00000338888 SMARCAL1Q9NZC9 954 aa22.76■■□□□ 1.23
RUNX3-202ENST00000338888 NID2Q14112 1375 aa22.75■■□□□ 1.23
RUNX3-202ENST00000338888 MEFVO15553 781 aaPredicted RBP22.75■■□□□ 1.23
RUNX3-202ENST00000338888 HSF2BPO75031 334 aa22.75■■□□□ 1.23
RUNX3-202ENST00000338888 PMS1P54277 932 aaKnown RBP22.75■■□□□ 1.23
RUNX3-202ENST00000338888 SNX12Q9UMY4 172 aa22.75■■□□□ 1.23
RUNX3-202ENST00000338888 ZNF330Q9Y3S2 320 aaPredicted RBP22.75■■□□□ 1.23
RUNX3-202ENST00000338888 A0A1W2PQC6 194 aa22.75■■□□□ 1.23
RUNX3-202ENST00000338888 XBP1P17861 261 aa22.75■■□□□ 1.23
RUNX3-202ENST00000338888 PHKA1P46020 1223 aa22.75■■□□□ 1.23
RUNX3-202ENST00000338888 KLK7P49862 253 aa22.75■■□□□ 1.23
RUNX3-202ENST00000338888 KIF5AQ12840 1032 aa22.75■■□□□ 1.23
RUNX3-202ENST00000338888 MEA1Q16626 185 aa22.75■■□□□ 1.23
RUNX3-202ENST00000338888 TTC38Q5R3I4 469 aa22.75■■□□□ 1.23
RUNX3-202ENST00000338888 SPATA4Q8NEY3 305 aa22.75■■□□□ 1.23
RUNX3-202ENST00000338888 ZNHIT6Q9NWK9 470 aaKnown RBP22.75■■□□□ 1.23
RUNX3-202ENST00000338888 TRIM21P19474 475 aaKnown RBP22.74■■□□□ 1.23
RUNX3-202ENST00000338888 EEF2KMTQ96G04 330 aa22.74■■□□□ 1.23
RUNX3-202ENST00000338888 PHF20Q9BVI0 1012 aa22.74■■□□□ 1.23
RUNX3-202ENST00000338888 CEP83Q9Y592 693 aa22.74■■□□□ 1.23
RUNX3-202ENST00000338888 B4DLN1 442 aa22.74■■□□□ 1.23
RUNX3-202ENST00000338888 KRT14P02533 472 aa22.74■■□□□ 1.23
RUNX3-202ENST00000338888 EPB41P11171 864 aaKnown RBP22.74■■□□□ 1.23
RUNX3-202ENST00000338888 IL2RBP14784 551 aa22.74■■□□□ 1.23
RUNX3-202ENST00000338888 PKN1Q16512 942 aa22.74■■□□□ 1.23
RUNX3-202ENST00000338888 BTG4Q9NY30 223 aa22.74■■□□□ 1.23
RUNX3-202ENST00000338888 EHD2Q9NZN4 543 aa22.74■■□□□ 1.23
RUNX3-202ENST00000338888 LRWD1Q9UFC0 647 aa22.74■■□□□ 1.23
RUNX3-202ENST00000338888 RIPOR2Q9Y4F9 1068 aa22.74■■□□□ 1.23
RUNX3-202ENST00000338888 CXCR5P32302 372 aa22.73■■□□□ 1.23
RUNX3-202ENST00000338888 EPHB4P54760 987 aa22.73■■□□□ 1.23
RUNX3-202ENST00000338888 ALS2CLQ60I27 953 aa22.73■■□□□ 1.23
RUNX3-202ENST00000338888 SYNE4Q8N205 404 aa22.73■■□□□ 1.23
RUNX3-202ENST00000338888 MAGEB6Q8N7X4 407 aa22.73■■□□□ 1.23
RUNX3-202ENST00000338888 ZIM3Q96PE6 472 aa22.73■■□□□ 1.23
RUNX3-202ENST00000338888 PURBQ96QR8 312 aaKnown RBP22.73■■□□□ 1.23
RUNX3-202ENST00000338888 CARD10Q9BWT7 1032 aa22.73■■□□□ 1.23
RUNX3-202ENST00000338888 RNF26Q9BY78 433 aaPredicted RBP22.73■■□□□ 1.23
RUNX3-202ENST00000338888 CD248Q9HCU0 757 aa22.73■■□□□ 1.23
RUNX3-202ENST00000338888 GSG1L2A8MUP6 293 aa22.73■■□□□ 1.23
RUNX3-202ENST00000338888 BMP15O95972 392 aa22.73■■□□□ 1.23
RUNX3-202ENST00000338888 TDO2P48775 406 aa22.73■■□□□ 1.23
RUNX3-202ENST00000338888 NNTQ13423 1086 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms