RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 CTAGE4Q8IX94 777 aa11.39□□□□□ -0.59
HIF1A-202ENST00000337138 MSL3Q8N5Y2 521 aaKnown RBP11.39□□□□□ -0.59
HIF1A-202ENST00000337138 HDAC6Q9UBN7 1215 aa11.39□□□□□ -0.59
HIF1A-202ENST00000337138 MKRN1Q9UHC7 482 aaKnown RBP11.39□□□□□ -0.59
HIF1A-202ENST00000337138 IPO7O95373 1038 aaKnown RBP11.39□□□□□ -0.59
HIF1A-202ENST00000337138 UQCRFS1P1P0C7P4 283 aa11.39□□□□□ -0.59
HIF1A-202ENST00000337138 CYP2C19P33261 490 aa11.39□□□□□ -0.59
HIF1A-202ENST00000337138 KRT2P35908 639 aa11.39□□□□□ -0.59
HIF1A-202ENST00000337138 PLCD1P51178 756 aa11.39□□□□□ -0.59
HIF1A-202ENST00000337138 CRACR2AQ9BSW2 395 aa11.39□□□□□ -0.59
HIF1A-202ENST00000337138 ABCB6Q9NP58 842 aa11.39□□□□□ -0.59
HIF1A-202ENST00000337138 FAN1Q9Y2M0 1017 aa11.39□□□□□ -0.59
HIF1A-202ENST00000337138 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.39□□□□□ -0.59
HIF1A-202ENST00000337138 RRP15Q9Y3B9 282 aaKnown RBP11.39□□□□□ -0.59
HIF1A-202ENST00000337138 ZNF335Q9H4Z2 1342 aaPredicted RBP11.38□□□□□ -0.59
HIF1A-202ENST00000337138 MACROD2A1Z1Q3 448 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 NTSR2O95665 410 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 TXLNAP40222 546 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 PDXDC2PQ6P474 469 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 IRF2BP1Q8IU81 584 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 LPIN2Q92539 896 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 CNNM2Q9H8M5 875 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 ADD3Q9UEY8 706 aaKnown RBP11.38□□□□□ -0.59
HIF1A-202ENST00000337138 ADAM21Q9UKJ8 722 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 GDAQ9Y2T3 454 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 MROH5Q6ZUA9 1318 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 TRIM49BA6NDI0 452 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 PPARAQ07869 468 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 TROAPQ12815 778 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 GSPT2Q8IYD1 628 aaKnown RBP11.38□□□□□ -0.59
HIF1A-202ENST00000337138 ESR2Q92731 530 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 GPKOWQ92917 476 aaPredicted RBP eCLIP11.38□□□□□ -0.59
HIF1A-202ENST00000337138 PAGE5Q96GU1 130 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 VAT1LQ9HCJ6 419 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.38□□□□□ -0.59
HIF1A-202ENST00000337138 H3BQF6 201 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 CAMTA2O94983 1202 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 IVLP07476 585 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 ARHGAP25P42331 645 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 AMPD2Q01433 879 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 CCDC70Q6NSX1 233 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 ANKZF1Q9H8Y5 726 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 JADE2Q9NQC1 790 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 FEZ2Q9UHY8 353 aaPredicted RBP11.38□□□□□ -0.59
HIF1A-202ENST00000337138 ADGRG1Q9Y653 693 aa11.38□□□□□ -0.59
HIF1A-202ENST00000337138 XDHP47989 1333 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 RAD21O60216 631 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 KIAA0754O94854 1291 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 VEGFAP15692 232 aaPredicted RBP11.37□□□□□ -0.59
HIF1A-202ENST00000337138 USP5P45974 858 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 IQCA1Q86XH1 822 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 CTCFLQ8NI51 663 aaPredicted RBP11.37□□□□□ -0.59
HIF1A-202ENST00000337138 PNKPQ96T60 521 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 FUT8Q9BYC5 575 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 MAGEB6P1A0A0J9YX57 407 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 PDE8AO60658 829 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 TTC38Q5R3I4 469 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 SUSD4Q5VX71 490 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 TRIM47Q96LD4 638 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 CHP1Q99653 195 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 FAM107BQ9H098 131 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 AATFQ9NY61 560 aaKnown RBP eCLIP11.37□□□□□ -0.59
HIF1A-202ENST00000337138 RAB21Q9UL25 225 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 REXO2Q9Y3B8 237 aaKnown RBP11.37□□□□□ -0.59
HIF1A-202ENST00000337138 UBR3Q6ZT12 1888 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 NRXN2Q9P2S2 1712 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 ADAMTSL1Q8N6G6 1762 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 PP2D1A8MPX8 630 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 CT47A1Q5JQC4 288 aaPredicted RBP11.37□□□□□ -0.59
HIF1A-202ENST00000337138 SPATA1Q5VX52 437 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 KANK3Q6NY19 840 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 C3orf67Q6ZVT6 689 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 SRGAP1Q7Z6B7 1085 aa11.37□□□□□ -0.59
HIF1A-202ENST00000337138 TSPY2A6NKD2 308 aa11.36□□□□□ -0.59
HIF1A-202ENST00000337138 IL6STP40189 918 aaPredicted RBP11.36□□□□□ -0.59
HIF1A-202ENST00000337138 NELFBQ8WX92 580 aa11.36□□□□□ -0.59
HIF1A-202ENST00000337138 RABGGTAQ92696 567 aa11.36□□□□□ -0.59
HIF1A-202ENST00000337138 MAGEC2Q9UBF1 373 aaPredicted RBP11.36□□□□□ -0.59
HIF1A-202ENST00000337138 NIP7Q9Y221 180 aaKnown RBP eCLIP11.36□□□□□ -0.59
HIF1A-202ENST00000337138 USP17L12C9JPN9 530 aa11.36□□□□□ -0.59
HIF1A-202ENST00000337138 USP17L21D6R901 530 aa11.36□□□□□ -0.59
HIF1A-202ENST00000337138 EDIL3O43854 480 aa11.36□□□□□ -0.59
HIF1A-202ENST00000337138 ZPR1O75312 459 aa11.36□□□□□ -0.59
HIF1A-202ENST00000337138 STAT6P42226 847 aa11.36□□□□□ -0.59
HIF1A-202ENST00000337138 CCDC122Q5T0U0 273 aa11.36□□□□□ -0.59
HIF1A-202ENST00000337138 RASGRP2Q7LDG7 609 aa11.36□□□□□ -0.59
HIF1A-202ENST00000337138 TRIML1Q8N9V2 468 aa11.36□□□□□ -0.59
HIF1A-202ENST00000337138 NAPGQ99747 312 aaPredicted RBP11.36□□□□□ -0.59
HIF1A-202ENST00000337138 RNF41Q9H4P4 317 aaPredicted RBP11.36□□□□□ -0.59
HIF1A-202ENST00000337138 TFCP2L1Q9NZI6 479 aa11.36□□□□□ -0.59
HIF1A-202ENST00000337138 ITIH6Q6UXX5 1313 aa11.36□□□□□ -0.59
HIF1A-202ENST00000337138 TRIM21P19474 475 aaKnown RBP11.36□□□□□ -0.59
HIF1A-202ENST00000337138 VSNL1P62760 191 aa11.36□□□□□ -0.59
HIF1A-202ENST00000337138 NOA1Q8NC60 698 aaKnown RBP11.36□□□□□ -0.59
HIF1A-202ENST00000337138 GIMAP7Q8NHV1 300 aa11.36□□□□□ -0.59
HIF1A-202ENST00000337138 RIN2Q8WYP3 895 aaPredicted RBP11.36□□□□□ -0.59
HIF1A-202ENST00000337138 POLD4Q9HCU8 107 aa11.36□□□□□ -0.59
HIF1A-202ENST00000337138 CYP27A1Q02318 531 aa11.35□□□□□ -0.59
HIF1A-202ENST00000337138 KRT31Q15323 416 aa11.35□□□□□ -0.59
HIF1A-202ENST00000337138 CCDC178Q5BJE1 867 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms