RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 ARHGAP6O43182 974 aa13.5□□□□□ -0.25
FN1-202ENST00000336916 PAK2Q13177 524 aa13.5□□□□□ -0.25
FN1-202ENST00000336916 MIER3Q7Z3K6 550 aa13.5□□□□□ -0.25
FN1-202ENST00000336916 TRIM58Q8NG06 486 aa13.5□□□□□ -0.25
FN1-202ENST00000336916 HESX1Q9UBX0 185 aa13.5□□□□□ -0.25
FN1-202ENST00000336916 V9GY48 417 aaPredicted RBP13.5□□□□□ -0.25
FN1-202ENST00000336916 AATKQ6ZMQ8 1374 aa13.5□□□□□ -0.25
FN1-202ENST00000336916 SGSM2O43147 1006 aa13.5□□□□□ -0.25
FN1-202ENST00000336916 ANKRD35Q8N283 1001 aa13.5□□□□□ -0.25
FN1-202ENST00000336916 BBOF1Q8ND07 529 aa13.5□□□□□ -0.25
FN1-202ENST00000336916 ZSCAN10Q96SZ4 725 aaPredicted RBP13.5□□□□□ -0.25
FN1-202ENST00000336916 RPAP1Q9BWH6 1393 aaPredicted RBP13.5□□□□□ -0.25
FN1-202ENST00000336916 SEPT6Q14141 434 aa13.5□□□□□ -0.25
FN1-202ENST00000336916 TEKT3Q9BXF9 490 aa13.5□□□□□ -0.25
FN1-202ENST00000336916 AP5M1Q9H0R1 490 aa13.5□□□□□ -0.25
FN1-202ENST00000336916 HSPA1LP34931 641 aa13.5□□□□□ -0.25
FN1-202ENST00000336916 CHST3Q7LGC8 479 aa13.5□□□□□ -0.25
FN1-202ENST00000336916 CALR3Q96L12 384 aaKnown RBP13.5□□□□□ -0.25
FN1-202ENST00000336916 USP40Q9NVE5 1235 aa13.5□□□□□ -0.25
FN1-202ENST00000336916 POLGP54098 1239 aaPredicted RBP13.5□□□□□ -0.25
FN1-202ENST00000336916 ARHGAP4P98171 946 aa13.5□□□□□ -0.25
FN1-202ENST00000336916 SURF1Q15526 300 aa13.5□□□□□ -0.25
FN1-202ENST00000336916 PEX26Q7Z412 305 aa13.5□□□□□ -0.25
FN1-202ENST00000336916 DHX36Q9H2U1 1008 aaKnown RBP13.5□□□□□ -0.25
FN1-202ENST00000336916 MAP3K15Q6ZN16 1313 aa13.5□□□□□ -0.25
FN1-202ENST00000336916 TXKP42681 527 aa13.5□□□□□ -0.25
FN1-202ENST00000336916 ALCAMQ13740 583 aa13.5□□□□□ -0.25
FN1-202ENST00000336916 TGFBRAP1Q8WUH2 860 aa13.5□□□□□ -0.25
FN1-202ENST00000336916 CPXCR1Q8N123 301 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 TESK2Q96S53 571 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 SLC8A2Q9UPR5 921 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 ZMYM6O95789 1325 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 NLRP12P59046 1061 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 EVCP57679 992 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 AMFRQ9UKV5 643 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 STAM2O75886 525 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 SEPT2Q15019 361 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 CASC4Q6P4E1 433 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 SECISBP2LQ93073 1101 aaKnown RBP13.49□□□□□ -0.25
FN1-202ENST00000336916 ZSWIM4Q9H7M6 989 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 ATG3Q9NT62 314 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 GINS2Q9Y248 185 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 TTLL1O95922 423 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 FAM178BQ8IXR5 827 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.49□□□□□ -0.251e-323■■■□□ 15.1
FN1-202ENST00000336916 RBSNQ9H1K0 784 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 CCDC68Q9H2F9 335 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 WDR70Q9NW82 654 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 LCMT1Q9UIC8 334 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 RNF123Q5XPI4 1314 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 CAPN2P17655 700 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 CCDC186Q7Z3E2 898 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 EFCAB13Q8IY85 973 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 RIC8AQ9NPQ8 531 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 DDX25Q9UHL0 483 aaKnown RBP13.49□□□□□ -0.25
FN1-202ENST00000336916 FBXO11Q86XK2 927 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 ASIC3Q9UHC3 531 aa13.49□□□□□ -0.25
FN1-202ENST00000336916 C2CD5Q86YS7 1000 aa13.48□□□□□ -0.25
FN1-202ENST00000336916 LZTFL1Q9NQ48 299 aa13.48□□□□□ -0.25
FN1-202ENST00000336916 MYO3BQ8WXR4 1341 aa13.48□□□□□ -0.25
FN1-202ENST00000336916 ZBTB7BO15156 539 aaPredicted RBP13.48□□□□□ -0.25
FN1-202ENST00000336916 PCCAP05165 728 aaPredicted RBP13.48□□□□□ -0.25
FN1-202ENST00000336916 GAP43P17677 238 aa13.48□□□□□ -0.25
FN1-202ENST00000336916 TMX1Q9H3N1 280 aa13.48□□□□□ -0.25
FN1-202ENST00000336916 TNNQ9UQP3 1299 aa13.48□□□□□ -0.25
FN1-202ENST00000336916 SMCO2A6NFE2 343 aa13.48□□□□□ -0.25
FN1-202ENST00000336916 TLR3O15455 904 aaKnown RBP13.48□□□□□ -0.25
FN1-202ENST00000336916 LONP1P36776 959 aaKnown RBP13.48□□□□□ -0.25
FN1-202ENST00000336916 TIMM10P62072 90 aa13.48□□□□□ -0.25
FN1-202ENST00000336916 C10orf76Q5T2E6 689 aa13.48□□□□□ -0.25
FN1-202ENST00000336916 ZNF189O75820 626 aaPredicted RBP13.48□□□□□ -0.25
FN1-202ENST00000336916 KRT19P08727 400 aa13.48□□□□□ -0.25
FN1-202ENST00000336916 PDE6CP51160 858 aa13.48□□□□□ -0.25
FN1-202ENST00000336916 PPARAQ07869 468 aa13.48□□□□□ -0.25
FN1-202ENST00000336916 RPS6KA1Q15418 735 aa13.48□□□□□ -0.25
FN1-202ENST00000336916 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.48□□□□□ -0.25
FN1-202ENST00000336916 GCNAQ96QF7 691 aa13.48□□□□□ -0.25
FN1-202ENST00000336916 GADL1Q6ZQY3 521 aa13.48□□□□□ -0.25
FN1-202ENST00000336916 GLI2P10070 1586 aa13.48□□□□□ -0.25
FN1-202ENST00000336916 KIF3CO14782 793 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 IREB2P48200 963 aaKnown RBP13.47□□□□□ -0.25
FN1-202ENST00000336916 KLHL30Q0D2K2 578 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 TCP10Q12799 353 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 PROCA1Q8NCQ7 364 aaPredicted RBP13.47□□□□□ -0.25
FN1-202ENST00000336916 NPHP4O75161 1426 aaPredicted RBP13.47□□□□□ -0.25
FN1-202ENST00000336916 NSMFQ6X4W1 530 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 MYOCDQ8IZQ8 938 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 CCHCR1Q8TD31 782 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 CAPZA3Q96KX2 299 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 MED10Q9BTT4 135 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 CCDC160A6NGH7 325 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 TFAP4Q01664 338 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 ABCB5Q2M3G0 1257 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 RSRC1Q96IZ7 334 aaKnown RBP13.47□□□□□ -0.25
FN1-202ENST00000336916 GTF2F1P35269 517 aaKnown RBP eCLIP13.47□□□□□ -0.254e-10■■■■□ 25.6
FN1-202ENST00000336916 NEDD9Q14511 834 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 RPS6KA2Q15349 733 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 UAP1Q16222 522 aaPredicted RBP13.47□□□□□ -0.25
FN1-202ENST00000336916 TPH2Q8IWU9 490 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 NELFBQ8WX92 580 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms