RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 TRIML2Q8N7C3 387 aa10.74□□□□□ -0.69
COL4A6-201ENST00000334504 CDK13Q14004 1512 aaKnown RBP10.74□□□□□ -0.69
COL4A6-201ENST00000334504 GNGT2O14610 69 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 MRPL12P52815 198 aaKnown RBP10.73□□□□□ -0.69
COL4A6-201ENST00000334504 DYNC1I2Q13409 638 aaKnown RBP10.73□□□□□ -0.69
COL4A6-201ENST00000334504 ZC3H18Q86VM9 953 aaKnown RBP10.73□□□□□ -0.69
COL4A6-201ENST00000334504 CEP19Q96LK0 163 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 SAP30BPQ9UHR5 308 aaKnown RBP10.73□□□□□ -0.69
COL4A6-201ENST00000334504 ESYT2A0FGR8 921 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 EIF3CLB5ME19 914 aaKnown RBP10.73□□□□□ -0.69
COL4A6-201ENST00000334504 HEXIM1O94992 359 aaKnown RBP10.73□□□□□ -0.69
COL4A6-201ENST00000334504 ATF7P17544 494 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-201ENST00000334504 TMED2Q15363 201 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 ME3Q16798 604 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 EIF3CQ99613 913 aaKnown RBP10.73□□□□□ -0.69
COL4A6-201ENST00000334504 TADA3O75528 432 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 MYCP01106 439 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-201ENST00000334504 CD19P15391 556 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 PCYT1AP49585 367 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 RASSF7Q02833 373 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 KRT81Q14533 505 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 ZNF827Q17R98 1081 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 ZNF449Q6P9G9 518 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 CYTH2Q99418 400 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 PDHA1P08559 390 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 DNM2P50570 870 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 KRT24Q2M2I5 525 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 FBXO38Q6PIJ6 1188 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 ZNF804AQ7Z570 1209 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 BBOF1Q8ND07 529 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 PIK3R5Q8WYR1 880 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 ARMT1Q9H993 441 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 SLC39A6Q13433 755 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 CALCRLQ16602 461 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 SPOUT1Q5T280 376 aaKnown RBP10.73□□□□□ -0.69
COL4A6-201ENST00000334504 ARMC9Q7Z3E5 817 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 CCHCR1Q8TD31 782 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 HDAC11Q96DB2 347 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 ATP8A1Q9Y2Q0 1164 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 ORC6Q9Y5N6 252 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 TOM1O60784 492 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 POLR2FP61218 127 aaKnown RBP10.73□□□□□ -0.69
COL4A6-201ENST00000334504 PKP1Q13835 747 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 NBPF5PQ86XG9 351 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-201ENST00000334504 DNM3Q9UQ16 869 aa10.73□□□□□ -0.69
COL4A6-201ENST00000334504 TROQ12816 1431 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-201ENST00000334504 SYF2O95926 243 aaKnown RBP10.72□□□□□ -0.69
COL4A6-201ENST00000334504 MSH2P43246 934 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 ANKRD13CQ8N6S4 541 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 RDH13Q8NBN7 331 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 PALMDQ9NP74 551 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 KRT82Q9NSB4 513 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 PACSIN2Q9UNF0 486 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-201ENST00000334504 NR1D1P20393 614 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 CASP14P31944 242 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 KAZNQ674X7 775 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 TRIM56Q9BRZ2 755 aaKnown RBP10.72□□□□□ -0.69
COL4A6-201ENST00000334504 CNOT10Q9H9A5 744 aaKnown RBP10.72□□□□□ -0.69
COL4A6-201ENST00000334504 NOVA2Q9UNW9 492 aaKnown RBP10.72□□□□□ -0.69
COL4A6-201ENST00000334504 DDX39AO00148 427 aaKnown RBP10.72□□□□□ -0.69
COL4A6-201ENST00000334504 CHUKO15111 745 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 GPC4O75487 556 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 GARSP41250 739 aaKnown RBP10.72□□□□□ -0.69
COL4A6-201ENST00000334504 NONOQ15233 471 aaKnown RBP eCLIP10.72□□□□□ -0.69
COL4A6-201ENST00000334504 NME8Q8N427 588 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 NSMCE1Q8WV22 266 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 TUBB6Q9BUF5 446 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 SPZ1Q9BXG8 430 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 CCDC68Q9H2F9 335 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 ABCB6Q9NP58 842 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 PCDHB13Q9Y5F0 798 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 MAN1A2O60476 641 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 PNMA6AP0CW24 399 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-201ENST00000334504 YWHAGP61981 247 aaKnown RBP eCLIP10.72□□□□□ -0.69
COL4A6-201ENST00000334504 CTDSPL2Q05D32 466 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 CASP8Q14790 479 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 ARHGEF18Q6ZSZ5 1173 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 EIF4E1BA6NMX2 242 aaKnown RBP10.72□□□□□ -0.69
COL4A6-201ENST00000334504 ACTN3Q08043 901 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-201ENST00000334504 SNX1Q13596 522 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 PTPN21Q16825 1174 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 DCLK2Q8N568 766 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 LINS1Q8NG48 757 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 KCNV2Q8TDN2 545 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 RUNDC3BQ96NL0 473 aa10.72□□□□□ -0.69
COL4A6-201ENST00000334504 AOX1Q06278 1338 aa10.71□□□□□ -0.69
COL4A6-201ENST00000334504 INHBAP08476 426 aa10.71□□□□□ -0.69
COL4A6-201ENST00000334504 GPR162Q16538 588 aa10.71□□□□□ -0.69
COL4A6-201ENST00000334504 USP6NLQ92738 828 aa10.71□□□□□ -0.69
COL4A6-201ENST00000334504 SH3GL3Q99963 347 aa10.71□□□□□ -0.69
COL4A6-201ENST00000334504 FAM167BQ9BTA0 163 aa10.71□□□□□ -0.69
COL4A6-201ENST00000334504 ABCC5O15440 1437 aa10.71□□□□□ -0.69
COL4A6-201ENST00000334504 ZFXP17010 805 aaPredicted RBP10.71□□□□□ -0.69
COL4A6-201ENST00000334504 SLCO1A2P46721 670 aa10.71□□□□□ -0.69
COL4A6-201ENST00000334504 TCP11X2Q5H9J9 407 aa10.71□□□□□ -0.69
COL4A6-201ENST00000334504 NRBF2Q96F24 287 aa10.71□□□□□ -0.69
COL4A6-201ENST00000334504 JAG2Q9Y219 1238 aa10.71□□□□□ -0.69
COL4A6-201ENST00000334504 PTPN23Q9H3S7 1636 aa10.71□□□□□ -0.69
COL4A6-201ENST00000334504 PALM3A6NDB9 673 aaPredicted RBP10.71□□□□□ -0.69
COL4A6-201ENST00000334504 KRT19P08727 400 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms