RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 RCSD1Q6JBY9 416 aa18.08■□□□□ 0.48
PDGFB-201ENST00000331163 GADL1Q6ZQY3 521 aa18.08■□□□□ 0.48
PDGFB-201ENST00000331163 EEF2KMTQ96G04 330 aa18.08■□□□□ 0.48
PDGFB-201ENST00000331163 PSMD1Q99460 953 aa18.08■□□□□ 0.48
PDGFB-201ENST00000331163 PCDHA7Q9UN72 937 aa18.08■□□□□ 0.48
PDGFB-201ENST00000331163 TPD52L1Q16890 204 aaPredicted RBP18.07■□□□□ 0.48
PDGFB-201ENST00000331163 ZNF592Q92610 1267 aa18.07■□□□□ 0.48
PDGFB-201ENST00000331163 MYH3P11055 1940 aa18.07■□□□□ 0.48
PDGFB-201ENST00000331163 COBLO75128 1261 aa18.07■□□□□ 0.48
PDGFB-201ENST00000331163 SH3BP5LQ7L8J4 393 aa18.07■□□□□ 0.48
PDGFB-201ENST00000331163 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.07■□□□□ 0.48
PDGFB-201ENST00000331163 SALL1Q9NSC2 1324 aa18.07■□□□□ 0.48
PDGFB-201ENST00000331163 DDAH1O94760 285 aa18.07■□□□□ 0.48
PDGFB-201ENST00000331163 HMGCS2P54868 508 aa18.07■□□□□ 0.48
PDGFB-201ENST00000331163 CCDC178Q5BJE1 867 aa18.07■□□□□ 0.48
PDGFB-201ENST00000331163 GRAMD1CQ8IYS0 662 aa18.07■□□□□ 0.48
PDGFB-201ENST00000331163 OTUD5Q96G74 571 aa18.07■□□□□ 0.48
PDGFB-201ENST00000331163 POLD4Q9HCU8 107 aa18.07■□□□□ 0.48
PDGFB-201ENST00000331163 BMP2KQ9NSY1 1161 aaPredicted RBP18.07■□□□□ 0.48
PDGFB-201ENST00000331163 VIL1P09327 827 aaKnown RBP18.06■□□□□ 0.48
PDGFB-201ENST00000331163 NF2P35240 595 aa18.06■□□□□ 0.48
PDGFB-201ENST00000331163 UBA7P41226 1012 aa18.06■□□□□ 0.48
PDGFB-201ENST00000331163 FMR1Q06787 632 aaKnown RBP eCLIP18.06■□□□□ 0.48
PDGFB-201ENST00000331163 TTC38Q5R3I4 469 aa18.06■□□□□ 0.48
PDGFB-201ENST00000331163 BLIDQ8IZY5 108 aa18.06■□□□□ 0.48
PDGFB-201ENST00000331163 CCDC17Q96LX7 622 aa18.06■□□□□ 0.48
PDGFB-201ENST00000331163 DNAJC25Q9H1X3 360 aa18.06■□□□□ 0.48
PDGFB-201ENST00000331163 SWAP70Q9UH65 585 aa18.06■□□□□ 0.48
PDGFB-201ENST00000331163 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.06■□□□□ 0.48
PDGFB-201ENST00000331163 SAMM50Q9Y512 469 aa18.06■□□□□ 0.48
PDGFB-201ENST00000331163 POLR2DO15514 142 aaKnown RBP18.06■□□□□ 0.48
PDGFB-201ENST00000331163 NDUFB10O96000 172 aa18.06■□□□□ 0.48
PDGFB-201ENST00000331163 BMP3P12645 472 aa18.06■□□□□ 0.48
PDGFB-201ENST00000331163 IDEP14735 1019 aa18.06■□□□□ 0.48
PDGFB-201ENST00000331163 CCDC183Q5T5S1 534 aa18.06■□□□□ 0.48
PDGFB-201ENST00000331163 REXO1Q8N1G1 1221 aaKnown RBP18.06■□□□□ 0.48
PDGFB-201ENST00000331163 MRPS27Q92552 414 aaKnown RBP18.06■□□□□ 0.48
PDGFB-201ENST00000331163 RTEL1Q9NZ71 1219 aa18.06■□□□□ 0.48
PDGFB-201ENST00000331163 MYO3BQ8WXR4 1341 aa18.06■□□□□ 0.48
PDGFB-201ENST00000331163 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.06■□□□□ 0.48
PDGFB-201ENST00000331163 CALML3P27482 149 aa18.06■□□□□ 0.48
PDGFB-201ENST00000331163 CASP1P29466 404 aa18.06■□□□□ 0.48
PDGFB-201ENST00000331163 PTGER2P43116 358 aa18.06■□□□□ 0.48
PDGFB-201ENST00000331163 MTMR2Q13614 643 aa18.06■□□□□ 0.48
PDGFB-201ENST00000331163 ADGRF4Q8IZF3 695 aa18.06■□□□□ 0.48
PDGFB-201ENST00000331163 ZNF710Q8N1W2 664 aa18.06■□□□□ 0.48
PDGFB-201ENST00000331163 SUGT1Q9Y2Z0 365 aa18.06■□□□□ 0.48
PDGFB-201ENST00000331163 BAZ2AQ9UIF9 1905 aaKnown RBP18.05■□□□□ 0.48
PDGFB-201ENST00000331163 SPDYE3A6NKU9 549 aa18.05■□□□□ 0.48
PDGFB-201ENST00000331163 PEX10O60683 326 aa18.05■□□□□ 0.48
PDGFB-201ENST00000331163 MMP1P03956 469 aa18.05■□□□□ 0.48
PDGFB-201ENST00000331163 MYCLP12524 364 aaPredicted RBP18.05■□□□□ 0.48
PDGFB-201ENST00000331163 PTGDRQ13258 359 aa18.05■□□□□ 0.48
PDGFB-201ENST00000331163 WWC2Q6AWC2 1192 aa18.05■□□□□ 0.48
PDGFB-201ENST00000331163 SLC30A10Q6XR72 485 aa18.05■□□□□ 0.48
PDGFB-201ENST00000331163 C15orf52Q6ZUT6 534 aaKnown RBP18.05■□□□□ 0.48
PDGFB-201ENST00000331163 TMEM179Q6ZVK1 233 aa18.05■□□□□ 0.48
PDGFB-201ENST00000331163 CCDC148Q8NFR7 591 aa18.05■□□□□ 0.48
PDGFB-201ENST00000331163 CUL5Q93034 780 aa18.05■□□□□ 0.48
PDGFB-201ENST00000331163 RNF26Q9BY78 433 aaPredicted RBP18.05■□□□□ 0.48
PDGFB-201ENST00000331163 MYH13Q9UKX3 1938 aa18.05■□□□□ 0.48
PDGFB-201ENST00000331163 GAKO14976 1311 aa18.05■□□□□ 0.48
PDGFB-201ENST00000331163 PDHBP11177 359 aa18.05■□□□□ 0.48
PDGFB-201ENST00000331163 PSTPIP2Q9H939 334 aa18.05■□□□□ 0.48
PDGFB-201ENST00000331163 CSADQ9Y600 493 aa18.05■□□□□ 0.48
PDGFB-201ENST00000331163 PPP1R12BO60237 982 aaPredicted RBP18.04■□□□□ 0.48
PDGFB-201ENST00000331163 YBX3P16989 372 aaKnown RBP eCLIP18.04■□□□□ 0.48
PDGFB-201ENST00000331163 ANAPC4Q9UJX5 808 aa18.04■□□□□ 0.48
PDGFB-201ENST00000331163 KRT18P05783 430 aaKnown RBP18.04■□□□□ 0.48
PDGFB-201ENST00000331163 CDK11BP21127 795 aaKnown RBP18.04■□□□□ 0.48
PDGFB-201ENST00000331163 NDUFA8P51970 172 aa18.04■□□□□ 0.48
PDGFB-201ENST00000331163 BRAPQ7Z569 592 aa18.04■□□□□ 0.48
PDGFB-201ENST00000331163 TNRC6CQ9HCJ0 1690 aaKnown RBP18.04■□□□□ 0.48
PDGFB-201ENST00000331163 CCDC192P0DO97 292 aa18.04■□□□□ 0.48
PDGFB-201ENST00000331163 TXLNAP40222 546 aa18.04■□□□□ 0.48
PDGFB-201ENST00000331163 CCDC12Q8WUD4 166 aaPredicted RBP18.04■□□□□ 0.48
PDGFB-201ENST00000331163 FAM151AQ8WW52 585 aa18.04■□□□□ 0.48
PDGFB-201ENST00000331163 MYO5AQ9Y4I1 1855 aaKnown RBP18.04■□□□□ 0.48
PDGFB-201ENST00000331163 ADCY7P51828 1080 aa18.03■□□□□ 0.48
PDGFB-201ENST00000331163 CDC37Q16543 378 aaPredicted RBP18.03■□□□□ 0.48
PDGFB-201ENST00000331163 EARS2Q5JPH6 523 aaKnown RBP18.03■□□□□ 0.48
PDGFB-201ENST00000331163 AGBL3Q8NEM8 1001 aa18.03■□□□□ 0.48
PDGFB-201ENST00000331163 CCDC43Q96MW1 224 aaKnown RBP18.03■□□□□ 0.48
PDGFB-201ENST00000331163 ZSCAN20P17040 1043 aaPredicted RBP18.03■□□□□ 0.48
PDGFB-201ENST00000331163 GNA11P29992 359 aa18.03■□□□□ 0.48
PDGFB-201ENST00000331163 GRIN1Q05586 938 aa18.03■□□□□ 0.48
PDGFB-201ENST00000331163 NTRK3Q16288 839 aa18.03■□□□□ 0.48
PDGFB-201ENST00000331163 KCNG4Q8TDN1 519 aa18.03■□□□□ 0.48
PDGFB-201ENST00000331163 TRIM5Q9C035 493 aa18.03■□□□□ 0.48
PDGFB-201ENST00000331163 ELP3Q9H9T3 547 aa18.03■□□□□ 0.48
PDGFB-201ENST00000331163 PCP11498 1178 aaKnown RBP18.03■□□□□ 0.48
PDGFB-201ENST00000331163 TECP42680 631 aa18.03■□□□□ 0.48
PDGFB-201ENST00000331163 DMTNQ08495 405 aa18.03■□□□□ 0.48
PDGFB-201ENST00000331163 EEPD1Q7L9B9 569 aa18.03■□□□□ 0.48
PDGFB-201ENST00000331163 DNAJC18Q9H819 358 aa18.03■□□□□ 0.48
PDGFB-201ENST00000331163 SLX4Q8IY92 1834 aa18.02■□□□□ 0.48
PDGFB-201ENST00000331163 RIOK3O14730 519 aaKnown RBP18.02■□□□□ 0.48
PDGFB-201ENST00000331163 FAM163AQ96GL9 167 aaPredicted RBP18.02■□□□□ 0.48
PDGFB-201ENST00000331163 EPSTI1Q96J88 318 aa18.02■□□□□ 0.48
PDGFB-201ENST00000331163 RAVER2Q9HCJ3 691 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms