RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 USP17L19D6RCP7 530 aa17.98■□□□□ 0.47
SYNM-201ENST00000328642 USP17L20D6RJB6 530 aa17.98■□□□□ 0.47
SYNM-201ENST00000328642 U2AF2P26368 475 aaKnown RBP eCLIP17.98■□□□□ 0.47
SYNM-201ENST00000328642 USP17L24Q0WX57 530 aa17.98■□□□□ 0.47
SYNM-201ENST00000328642 MCM6Q14566 821 aa17.98■□□□□ 0.47
SYNM-201ENST00000328642 NAA30Q147X3 362 aaPredicted RBP17.98■□□□□ 0.47
SYNM-201ENST00000328642 USP17L6PQ6QN14 398 aa17.98■□□□□ 0.47
SYNM-201ENST00000328642 PAXBP1Q9Y5B6 917 aa17.98■□□□□ 0.47
SYNM-201ENST00000328642 PRPF3O43395 683 aaKnown RBP17.98■□□□□ 0.47
SYNM-201ENST00000328642 TBC1D16Q8TBP0 767 aa17.98■□□□□ 0.47
SYNM-201ENST00000328642 CCDC42Q96M95 316 aa17.98■□□□□ 0.47
SYNM-201ENST00000328642 PYM1Q9BRP8 204 aaKnown RBP17.98■□□□□ 0.47
SYNM-201ENST00000328642 ABCC12Q96J65 1359 aa17.97■□□□□ 0.47
SYNM-201ENST00000328642 PPP6R2O75170 966 aa17.97■□□□□ 0.47
SYNM-201ENST00000328642 ELF2Q15723 593 aa17.97■□□□□ 0.47
SYNM-201ENST00000328642 ODF2Q5BJF6 829 aa17.97■□□□□ 0.47
SYNM-201ENST00000328642 TTBK2Q6IQ55 1244 aa17.97■□□□□ 0.47
SYNM-201ENST00000328642 MTERF4Q7Z6M4 381 aaKnown RBP17.97■□□□□ 0.47
SYNM-201ENST00000328642 CCDC84Q86UT8 332 aaPredicted RBP17.97■□□□□ 0.47
SYNM-201ENST00000328642 TPH2Q8IWU9 490 aa17.97■□□□□ 0.47
SYNM-201ENST00000328642 ERMNQ8TAM6 284 aa17.97■□□□□ 0.47
SYNM-201ENST00000328642 SLU7O95391 586 aaKnown RBP17.97■□□□□ 0.47
SYNM-201ENST00000328642 OR52Z1P0C646 297 aa17.97■□□□□ 0.47
SYNM-201ENST00000328642 AKR1B1P15121 316 aa17.97■□□□□ 0.47
SYNM-201ENST00000328642 FGFR2P21802 821 aa17.97■□□□□ 0.47
SYNM-201ENST00000328642 SGMS1Q86VZ5 419 aa17.97■□□□□ 0.47
SYNM-201ENST00000328642 RBM6P78332 1123 aaKnown RBP17.97■□□□□ 0.47
SYNM-201ENST00000328642 RAPGEF1Q13905 1077 aa17.97■□□□□ 0.47
SYNM-201ENST00000328642 ZBTB12Q9Y330 459 aaPredicted RBP17.97■□□□□ 0.47
SYNM-201ENST00000328642 ANKRD26Q9UPS8 1709 aa17.96■□□□□ 0.47
SYNM-201ENST00000328642 PPP1R12BO60237 982 aaPredicted RBP17.96■□□□□ 0.47
SYNM-201ENST00000328642 ALX1Q15699 326 aa17.96■□□□□ 0.47
SYNM-201ENST00000328642 ABCB5Q2M3G0 1257 aa17.96■□□□□ 0.47
SYNM-201ENST00000328642 SPECC1LQ69YQ0 1117 aa17.96■□□□□ 0.47
SYNM-201ENST00000328642 TRERF1Q96PN7 1200 aa17.96■□□□□ 0.47
SYNM-201ENST00000328642 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.96■□□□□ 0.47
SYNM-201ENST00000328642 ZNF500O60304 480 aaPredicted RBP17.96■□□□□ 0.47
SYNM-201ENST00000328642 POLD1P28340 1107 aa17.96■□□□□ 0.47
SYNM-201ENST00000328642 GRIK5Q16478 980 aa17.96■□□□□ 0.47
SYNM-201ENST00000328642 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.96■□□□□ 0.47
SYNM-201ENST00000328642 ANKRD13CQ8N6S4 541 aa17.96■□□□□ 0.47
SYNM-201ENST00000328642 ZNF408Q9H9D4 720 aa17.96■□□□□ 0.47
SYNM-201ENST00000328642 PCDHA4Q9UN74 947 aa17.96■□□□□ 0.47
SYNM-201ENST00000328642 JCADQ9P266 1359 aa17.96■□□□□ 0.47
SYNM-201ENST00000328642 KIAA1524Q8TCG1 905 aa17.96■□□□□ 0.46
SYNM-201ENST00000328642 FGFR1OPO95684 399 aaKnown RBP17.95■□□□□ 0.46
SYNM-201ENST00000328642 PTPREP23469 700 aa17.95■□□□□ 0.46
SYNM-201ENST00000328642 CUL4BQ13620 913 aa17.95■□□□□ 0.46
SYNM-201ENST00000328642 SEPT2Q15019 361 aa17.95■□□□□ 0.46
SYNM-201ENST00000328642 NIM1KQ8IY84 436 aa17.95■□□□□ 0.46
SYNM-201ENST00000328642 ZNF277Q9NRM2 450 aaPredicted RBP17.95■□□□□ 0.46
SYNM-201ENST00000328642 PHACTR2O75167 634 aa17.95■□□□□ 0.46
SYNM-201ENST00000328642 FAM13AO94988 1023 aa17.95■□□□□ 0.46
SYNM-201ENST00000328642 GH2P01242 217 aa17.95■□□□□ 0.46
SYNM-201ENST00000328642 RPN1P04843 607 aaKnown RBP17.95■□□□□ 0.46
SYNM-201ENST00000328642 HPS3Q969F9 1004 aa17.95■□□□□ 0.46
SYNM-201ENST00000328642 ZNF215Q9UL58 517 aaPredicted RBP17.95■□□□□ 0.46
SYNM-201ENST00000328642 POTEMA6NI47 508 aa17.95■□□□□ 0.46
SYNM-201ENST00000328642 ALAS1P13196 640 aa17.95■□□□□ 0.46
SYNM-201ENST00000328642 FBXO33Q7Z6M2 555 aa17.95■□□□□ 0.46
SYNM-201ENST00000328642 KCNB2Q92953 911 aa17.95■□□□□ 0.46
SYNM-201ENST00000328642 SRPRBQ9Y5M8 271 aaKnown RBP17.95■□□□□ 0.46
SYNM-201ENST00000328642 TRIM49BA6NDI0 452 aa17.94■□□□□ 0.46
SYNM-201ENST00000328642 AP5Z1O43299 807 aa17.94■□□□□ 0.46
SYNM-201ENST00000328642 DPF2Q92785 391 aa17.94■□□□□ 0.46
SYNM-201ENST00000328642 CCDC122Q5T0U0 273 aa17.94■□□□□ 0.46
SYNM-201ENST00000328642 C12orf60Q5U649 245 aa17.94■□□□□ 0.46
SYNM-201ENST00000328642 BARGINQ6ZT62 677 aa17.94■□□□□ 0.46
SYNM-201ENST00000328642 NFAT5O94916 1531 aa17.94■□□□□ 0.46
SYNM-201ENST00000328642 USP27XA6NNY8 438 aa17.94■□□□□ 0.46
SYNM-201ENST00000328642 USO1O60763 962 aaKnown RBP17.94■□□□□ 0.46
SYNM-201ENST00000328642 HARSP12081 509 aaKnown RBP17.94■□□□□ 0.46
SYNM-201ENST00000328642 PABPC4Q13310 644 aaKnown RBP eCLIP17.94■□□□□ 0.46
SYNM-201ENST00000328642 MORC3Q14149 939 aa17.94■□□□□ 0.46
SYNM-201ENST00000328642 FAM114A1Q8IWE2 563 aa17.94■□□□□ 0.46
SYNM-201ENST00000328642 GDAP1L1Q96MZ0 367 aa17.94■□□□□ 0.46
SYNM-201ENST00000328642 BCL2L12Q9HB09 334 aa17.94■□□□□ 0.46
SYNM-201ENST00000328642 ARHGEF10LQ9HCE6 1279 aa17.94■□□□□ 0.46
SYNM-201ENST00000328642 KIAA1024Q9UPX6 916 aa17.94■□□□□ 0.46
SYNM-201ENST00000328642 TTLL1O95922 423 aa17.93■□□□□ 0.46
SYNM-201ENST00000328642 VEGFAP15692 232 aaPredicted RBP17.93■□□□□ 0.46
SYNM-201ENST00000328642 CERKQ8TCT0 537 aa17.93■□□□□ 0.46
SYNM-201ENST00000328642 PAGE5Q96GU1 130 aa17.93■□□□□ 0.46
SYNM-201ENST00000328642 MRFAP1L1Q96HT8 127 aa17.93■□□□□ 0.46
SYNM-201ENST00000328642 PDLIM2Q96JY6 352 aa17.93■□□□□ 0.46
SYNM-201ENST00000328642 LUC7LQ9NQ29 371 aaKnown RBP17.93■□□□□ 0.46
SYNM-201ENST00000328642 USP17L10C9JJH3 530 aa17.93■□□□□ 0.46
SYNM-201ENST00000328642 CASP14P31944 242 aa17.93■□□□□ 0.46
SYNM-201ENST00000328642 CRKP46108 304 aa17.93■□□□□ 0.46
SYNM-201ENST00000328642 NBPF11Q86T75 865 aa17.93■□□□□ 0.46
SYNM-201ENST00000328642 ZMYND15Q9H091 742 aa17.93■□□□□ 0.46
SYNM-201ENST00000328642 PCDHB13Q9Y5F0 798 aa17.93■□□□□ 0.46
SYNM-201ENST00000328642 MROH7-TTC4A0A0A0MT08 1334 aa17.93■□□□□ 0.46
SYNM-201ENST00000328642 KCNJ18B7U540 433 aa17.93■□□□□ 0.46
SYNM-201ENST00000328642 SLFN14P0C7P3 912 aa17.93■□□□□ 0.46
SYNM-201ENST00000328642 KCNJ12Q14500 433 aa17.93■□□□□ 0.46
SYNM-201ENST00000328642 ERCC6LQ2NKX8 1250 aa17.93■□□□□ 0.46
SYNM-201ENST00000328642 BICD1Q96G01 975 aa17.93■□□□□ 0.46
SYNM-201ENST00000328642 DDX25Q9UHL0 483 aaKnown RBP17.93■□□□□ 0.46
SYNM-201ENST00000328642 PNPLA7Q6ZV29 1317 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms