RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 FGRP09769 529 aa15.84■□□□□ 0.13
ATP2C1-201ENST00000328560 SLC35F6Q8N357 371 aa15.84■□□□□ 0.13
ATP2C1-201ENST00000328560 DOT1LQ8TEK3 1739 aa15.84■□□□□ 0.13
ATP2C1-201ENST00000328560 TMEM60Q9H2L4 133 aa15.84■□□□□ 0.13
ATP2C1-201ENST00000328560 ZCCHC17Q9NP64 241 aaKnown RBP15.84■□□□□ 0.13
ATP2C1-201ENST00000328560 IL17RBQ9NRM6 502 aa15.84■□□□□ 0.13
ATP2C1-201ENST00000328560 BCL9LQ86UU0 1499 aa15.84■□□□□ 0.13
ATP2C1-201ENST00000328560 SEMA3EO15041 775 aa15.84■□□□□ 0.13
ATP2C1-201ENST00000328560 RPS6KA4O75676 772 aa15.84■□□□□ 0.13
ATP2C1-201ENST00000328560 CHMP4BP1P59074 171 aa15.84■□□□□ 0.13
ATP2C1-201ENST00000328560 GPR161Q8N6U8 529 aaKnown RBP15.84■□□□□ 0.13
ATP2C1-201ENST00000328560 ARFGAP3Q9NP61 516 aa15.84■□□□□ 0.13
ATP2C1-201ENST00000328560 TRAPPC10P48553 1259 aa15.83■□□□□ 0.12
ATP2C1-201ENST00000328560 TCP11X2Q5H9J9 407 aa15.83■□□□□ 0.12
ATP2C1-201ENST00000328560 ZNF658Q5TYW1 1059 aaPredicted RBP15.83■□□□□ 0.12
ATP2C1-201ENST00000328560 MEX3CQ5U5Q3 659 aaKnown RBP15.83■□□□□ 0.12
ATP2C1-201ENST00000328560 WWC2Q6AWC2 1192 aa15.83■□□□□ 0.12
ATP2C1-201ENST00000328560 TRIM47Q96LD4 638 aa15.83■□□□□ 0.12
ATP2C1-201ENST00000328560 RWDD2AQ9UIY3 292 aa15.83■□□□□ 0.12
ATP2C1-201ENST00000328560 PCDHA4Q9UN74 947 aa15.83■□□□□ 0.12
ATP2C1-201ENST00000328560 DOCK2Q92608 1830 aa15.83■□□□□ 0.12
ATP2C1-201ENST00000328560 PBX1P40424 430 aa15.83■□□□□ 0.12
ATP2C1-201ENST00000328560 GRIK5Q16478 980 aa15.83■□□□□ 0.12
ATP2C1-201ENST00000328560 NAA15Q9BXJ9 866 aaKnown RBP15.83■□□□□ 0.12
ATP2C1-201ENST00000328560 MYH6P13533 1939 aa15.83■□□□□ 0.12
ATP2C1-201ENST00000328560 RHOXF2BP0C7M4 288 aa15.82■□□□□ 0.12
ATP2C1-201ENST00000328560 ERVK-24P63145 666 aa15.82■□□□□ 0.12
ATP2C1-201ENST00000328560 PCMTD1Q96MG8 357 aaPredicted RBP15.82■□□□□ 0.12
ATP2C1-201ENST00000328560 CHP1Q99653 195 aa15.82■□□□□ 0.12
ATP2C1-201ENST00000328560 RHOXF2Q9BQY4 288 aa15.82■□□□□ 0.12
ATP2C1-201ENST00000328560 RMND1Q9NWS8 449 aa15.82■□□□□ 0.12
ATP2C1-201ENST00000328560 GUCA1BQ9UMX6 200 aa15.82■□□□□ 0.12
ATP2C1-201ENST00000328560 ROBO1Q9Y6N7 1651 aa15.82■□□□□ 0.12
ATP2C1-201ENST00000328560 CTAGE9A4FU28 777 aa15.82■□□□□ 0.12
ATP2C1-201ENST00000328560 CC2D1AQ6P1N0 951 aaPredicted RBP15.82■□□□□ 0.12
ATP2C1-201ENST00000328560 ABHD10Q9NUJ1 306 aa15.82■□□□□ 0.12
ATP2C1-201ENST00000328560 DUOX1Q9NRD9 1551 aa15.82■□□□□ 0.12
ATP2C1-201ENST00000328560 SASH3O75995 380 aa15.82■□□□□ 0.12
ATP2C1-201ENST00000328560 ZRANB2O95218 330 aaKnown RBP eCLIP15.82■□□□□ 0.123e-6■■■■■ 27.8
ATP2C1-201ENST00000328560 LONP1P36776 959 aaKnown RBP15.82■□□□□ 0.12
ATP2C1-201ENST00000328560 SPAG1Q07617 926 aa15.82■□□□□ 0.12
ATP2C1-201ENST00000328560 LETM2Q2VYF4 491 aa15.82■□□□□ 0.12
ATP2C1-201ENST00000328560 CT47A1Q5JQC4 288 aaPredicted RBP15.82■□□□□ 0.12
ATP2C1-201ENST00000328560 TRAPPC3LQ5T215 181 aa15.82■□□□□ 0.12
ATP2C1-201ENST00000328560 RNF216Q9NWF9 866 aaPredicted RBP15.82■□□□□ 0.12
ATP2C1-201ENST00000328560 FAM53CQ9NYF3 392 aa15.82■□□□□ 0.12
ATP2C1-201ENST00000328560 PARP1P09874 1014 aaKnown RBP15.81■□□□□ 0.12
ATP2C1-201ENST00000328560 PMS1P54277 932 aaKnown RBP15.81■□□□□ 0.12
ATP2C1-201ENST00000328560 C12orf60Q5U649 245 aa15.81■□□□□ 0.12
ATP2C1-201ENST00000328560 DISC1Q9NRI5 854 aa15.81■□□□□ 0.12
ATP2C1-201ENST00000328560 USP21Q9UK80 565 aa15.81■□□□□ 0.12
ATP2C1-201ENST00000328560 TFR2Q9UP52 801 aa15.81■□□□□ 0.12
ATP2C1-201ENST00000328560 CCDC178Q5BJE1 867 aa15.81■□□□□ 0.12
ATP2C1-201ENST00000328560 TMTC1Q8IUR5 882 aa15.81■□□□□ 0.12
ATP2C1-201ENST00000328560 TRIM10Q9UDY6 481 aa15.81■□□□□ 0.12
ATP2C1-201ENST00000328560 LIMA1Q9UHB6 759 aaKnown RBP15.81■□□□□ 0.12
ATP2C1-201ENST00000328560 ARAP2Q8WZ64 1704 aa15.81■□□□□ 0.12
ATP2C1-201ENST00000328560 TSR1Q2NL82 804 aaKnown RBP15.81■□□□□ 0.12
ATP2C1-201ENST00000328560 GPIHBP1Q8IV16 184 aa15.81■□□□□ 0.12
ATP2C1-201ENST00000328560 RABGGTAQ92696 567 aa15.81■□□□□ 0.12
ATP2C1-201ENST00000328560 PYM1Q9BRP8 204 aaKnown RBP15.81■□□□□ 0.12
ATP2C1-201ENST00000328560 MAGEC2Q9UBF1 373 aaPredicted RBP15.81■□□□□ 0.12
ATP2C1-201ENST00000328560 CNTNAP4Q9C0A0 1308 aa15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 BAG3O95817 575 aa15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 NAPAP54920 295 aa15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 MCM6Q14566 821 aa15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 SBK1Q52WX2 424 aa15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 SLC10A5Q5PT55 438 aa15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 CYP26C1Q6V0L0 522 aa15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 RPGRQ92834 1020 aaKnown RBP15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 CDC23Q9UJX2 597 aa15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 BCORQ6W2J9 1755 aa15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 CYTH3O43739 400 aa15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 TBC1D8O95759 1140 aa15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 NFIXQ14938 502 aa15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 RSRC2Q7L4I2 434 aaKnown RBP15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 SRGAP1Q7Z6B7 1085 aa15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 PCDHA6Q9UN73 950 aa15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 PCDHA8Q9Y5H6 950 aa15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 KLRF2D3W0D1 207 aa15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 STIM1Q13586 685 aa15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 ARL6IP4Q66PJ3 421 aaKnown RBP15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 DGKHQ86XP1 1220 aa15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 C4orf32Q8N8J7 132 aa15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 TMEM47Q9BQJ4 181 aa15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 TTF2Q9UNY4 1162 aaKnown RBP15.8■□□□□ 0.12
ATP2C1-201ENST00000328560 CCNT1O60563 726 aaKnown RBP15.79■□□□□ 0.12
ATP2C1-201ENST00000328560 OAS2P29728 719 aaKnown RBP15.79■□□□□ 0.12
ATP2C1-201ENST00000328560 GYS2P54840 703 aa15.79■□□□□ 0.12
ATP2C1-201ENST00000328560 SLC35G1Q2M3R5 365 aa15.79■□□□□ 0.12
ATP2C1-201ENST00000328560 USP17L2Q6R6M4 530 aa15.79■□□□□ 0.12
ATP2C1-201ENST00000328560 CNBD1Q8NA66 436 aa15.79■□□□□ 0.12
ATP2C1-201ENST00000328560 ARHGEF1Q92888 912 aaKnown RBP15.79■□□□□ 0.12
ATP2C1-201ENST00000328560 MAD2L2Q9UI95 211 aa15.79■□□□□ 0.12
ATP2C1-201ENST00000328560 MYH13Q9UKX3 1938 aa15.79■□□□□ 0.12
ATP2C1-201ENST00000328560 CACNA1SQ13698 1873 aa15.79■□□□□ 0.12
ATP2C1-201ENST00000328560 TTC26A0AVF1 554 aa15.79■□□□□ 0.12
ATP2C1-201ENST00000328560 SMC1AQ14683 1233 aaKnown RBP15.79■□□□□ 0.12
ATP2C1-201ENST00000328560 VPS72Q15906 364 aa15.79■□□□□ 0.12
ATP2C1-201ENST00000328560 RC3H1Q5TC82 1133 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms