RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 TFAP4Q01664 338 aa9.69□□□□□ -0.86
CCNC-201ENST00000326298 SNRNP48Q6IEG0 339 aaKnown RBP9.69□□□□□ -0.86
CCNC-201ENST00000326298 B4GALNT3Q6L9W6 998 aa9.69□□□□□ -0.86
CCNC-201ENST00000326298 MKL1Q969V6 931 aa9.69□□□□□ -0.86
CCNC-201ENST00000326298 KIFC2Q96AC6 838 aa9.69□□□□□ -0.86
CCNC-201ENST00000326298 SLF1Q9BQI6 1058 aa9.69□□□□□ -0.86
CCNC-201ENST00000326298 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.69□□□□□ -0.86
CCNC-201ENST00000326298 CHD9Q3L8U1 2897 aa9.69□□□□□ -0.86
CCNC-201ENST00000326298 ERC2O15083 957 aa9.68□□□□□ -0.86
CCNC-201ENST00000326298 PGK1P00558 417 aa9.68□□□□□ -0.86
CCNC-201ENST00000326298 Q7L0L9 218 aa9.68□□□□□ -0.86
CCNC-201ENST00000326298 ZNF444Q8N0Y2 327 aaPredicted RBP9.68□□□□□ -0.86
CCNC-201ENST00000326298 ABRAQ8N0Z2 381 aa9.68□□□□□ -0.86
CCNC-201ENST00000326298 EXOC6Q8TAG9 804 aa9.68□□□□□ -0.86
CCNC-201ENST00000326298 MMP19Q99542 508 aa9.68□□□□□ -0.86
CCNC-201ENST00000326298 NAPBQ9H115 298 aa9.68□□□□□ -0.86
CCNC-201ENST00000326298 PLXNA1Q9UIW2 1896 aa9.68□□□□□ -0.86
CCNC-201ENST00000326298 CUL9Q8IWT3 2517 aa9.68□□□□□ -0.86
CCNC-201ENST00000326298 SEPT4O43236 478 aa9.68□□□□□ -0.86
CCNC-201ENST00000326298 ZNF865P0CJ78 1059 aaPredicted RBP9.68□□□□□ -0.86
CCNC-201ENST00000326298 GNAT2P19087 354 aa9.68□□□□□ -0.86
CCNC-201ENST00000326298 ADCYAP1R1P41586 468 aa9.68□□□□□ -0.86
CCNC-201ENST00000326298 HDAC1Q13547 482 aaPredicted RBP9.68□□□□□ -0.86
CCNC-201ENST00000326298 SH3RF1Q7Z6J0 888 aa9.68□□□□□ -0.86
CCNC-201ENST00000326298 NEDD1Q8NHV4 660 aa9.68□□□□□ -0.86
CCNC-201ENST00000326298 TINF2Q9BSI4 451 aa9.68□□□□□ -0.86
CCNC-201ENST00000326298 MCM3APO60318 1980 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 RBAK-RBAKDNI3L0D1 243 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 DNM1LO00429 736 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 SNAI1O95863 264 aaPredicted RBP9.67□□□□□ -0.86
CCNC-201ENST00000326298 MCCP23508 829 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 ITGB8P26012 769 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 LRRC41Q15345 812 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 KCTD1Q719H9 257 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 PRPF38AQ8NAV1 312 aaKnown RBP9.67□□□□□ -0.86
CCNC-201ENST00000326298 PURBQ96QR8 312 aaKnown RBP9.67□□□□□ -0.86
CCNC-201ENST00000326298 SLC38A10Q9HBR0 1119 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 HOMER2Q9NSB8 354 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 MTMR7Q9Y216 660 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 ASTN1O14525 1302 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 ZNF536O15090 1300 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 DNAJC25-GNG10A0A024R161 153 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 MYADML2A6NDP7 307 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 TMEM232C9JQI7 657 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 SLC25A27O95847 323 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 TTLL1O95922 423 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 TSPY3P0CV98 308 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 TSPY8P0CW00 308 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 CAPN2P17655 700 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 BMP8BP34820 402 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 RTP1P59025 263 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 CNTN2Q02246 1040 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 NMIQ13287 307 aaPredicted RBP9.67□□□□□ -0.86
CCNC-201ENST00000326298 KCTD2Q14681 263 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 TMEM63BQ5T3F8 832 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 SLFN13Q68D06 897 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 AGBL1Q96MI9 1066 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 TEX13BQ9BXU2 312 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 ATP11BQ9Y2G3 1177 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 PLIN4Q96Q06 1357 aa9.67□□□□□ -0.86
CCNC-201ENST00000326298 MUC3AQ02505 3323 aa9.66□□□□□ -0.86
CCNC-201ENST00000326298 CHD7Q9P2D1 2997 aa9.66□□□□□ -0.86
CCNC-201ENST00000326298 FGAP02671 866 aa9.66□□□□□ -0.86
CCNC-201ENST00000326298 HAND2P61296 217 aa9.66□□□□□ -0.86
CCNC-201ENST00000326298 TRIM60Q495X7 471 aa9.66□□□□□ -0.86
CCNC-201ENST00000326298 SLC39A5Q6ZMH5 540 aa9.66□□□□□ -0.86
CCNC-201ENST00000326298 IL25Q9H293 177 aa9.66□□□□□ -0.86
CCNC-201ENST00000326298 STX8Q9UNK0 236 aa9.66□□□□□ -0.86
CCNC-201ENST00000326298 TRIM43BA6NCK2 446 aa9.66□□□□□ -0.86
CCNC-201ENST00000326298 BMP3P12645 472 aa9.66□□□□□ -0.86
CCNC-201ENST00000326298 TTBK2Q6IQ55 1244 aa9.66□□□□□ -0.86
CCNC-201ENST00000326298 SMC5Q8IY18 1101 aa9.66□□□□□ -0.86
CCNC-201ENST00000326298 GMCL1P1Q8NEA9 526 aa9.66□□□□□ -0.86
CCNC-201ENST00000326298 TRIM43Q96BQ3 446 aaPredicted RBP9.66□□□□□ -0.86
CCNC-201ENST00000326298 EVI5LQ96CN4 794 aa9.66□□□□□ -0.86
CCNC-201ENST00000326298 UBE2OQ9C0C9 1292 aaKnown RBP9.66□□□□□ -0.86
CCNC-201ENST00000326298 REV3LO60673 3130 aa9.65□□□□□ -0.86
CCNC-201ENST00000326298 MSCO60682 206 aa9.65□□□□□ -0.86
CCNC-201ENST00000326298 HSPD1P10809 573 aaKnown RBP9.65□□□□□ -0.86
CCNC-201ENST00000326298 PDE4BQ07343 736 aa9.65□□□□□ -0.86
CCNC-201ENST00000326298 PLEKHM2Q8IWE5 1019 aa9.65□□□□□ -0.86
CCNC-201ENST00000326298 TDHQ8IZJ6 230 aa9.65□□□□□ -0.86
CCNC-201ENST00000326298 NACAP1Q9BZK3 213 aa9.65□□□□□ -0.86
CCNC-201ENST00000326298 XPNPEP3Q9NQH7 507 aa9.65□□□□□ -0.86
CCNC-201ENST00000326298 A0A1W2PPC1 479 aa9.64□□□□□ -0.87
CCNC-201ENST00000326298 ATP2A1O14983 1001 aa9.64□□□□□ -0.87
CCNC-201ENST00000326298 RANBP6O60518 1105 aaKnown RBP9.64□□□□□ -0.87
CCNC-201ENST00000326298 ADAMTS4O75173 837 aa9.64□□□□□ -0.87
CCNC-201ENST00000326298 FGRP09769 529 aa9.64□□□□□ -0.87
CCNC-201ENST00000326298 SLC16A2P36021 539 aa9.64□□□□□ -0.87
CCNC-201ENST00000326298 LTBP2Q14767 1821 aa9.64□□□□□ -0.87
CCNC-201ENST00000326298 MUM1L1Q5H9M0 696 aa9.64□□□□□ -0.87
CCNC-201ENST00000326298 C9orf50Q5SZB4 431 aa9.64□□□□□ -0.87
CCNC-201ENST00000326298 TBC1D10CQ8IV04 446 aa9.64□□□□□ -0.87
CCNC-201ENST00000326298 KATNBL1Q9H079 304 aa9.64□□□□□ -0.87
CCNC-201ENST00000326298 ISY1Q9ULR0 285 aaKnown RBP9.64□□□□□ -0.87
CCNC-201ENST00000326298 XIRP2A4UGR9 3374 aa9.64□□□□□ -0.87
CCNC-201ENST00000326298 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.64□□□□□ -0.87
CCNC-201ENST00000326298 SOWAHBA6NEL2 793 aa9.64□□□□□ -0.87
CCNC-201ENST00000326298 TSPY2A6NKD2 308 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms