RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 KCNQ4P56696 695 aa9.93□□□□□ -0.82
CD28-201ENST00000324106 KIAA1841Q6NSI8 718 aa9.93□□□□□ -0.82
CD28-201ENST00000324106 DYMQ7RTS9 669 aa9.93□□□□□ -0.82
CD28-201ENST00000324106 GPBP1Q86WP2 473 aa9.93□□□□□ -0.82
CD28-201ENST00000324106 OTUD7AQ8TE49 926 aaPredicted RBP9.93□□□□□ -0.82
CD28-201ENST00000324106 METTL14Q9HCE5 456 aaKnown RBP9.93□□□□□ -0.82
CD28-201ENST00000324106 HOXC10Q9NYD6 342 aa9.93□□□□□ -0.82
CD28-201ENST00000324106 LRRIQ4A6NIV6 560 aa9.92□□□□□ -0.82
CD28-201ENST00000324106 CPA1P15085 419 aa9.92□□□□□ -0.82
CD28-201ENST00000324106 ALDH3A1P30838 453 aa9.92□□□□□ -0.82
CD28-201ENST00000324106 PDZD4Q76G19 769 aaPredicted RBP9.92□□□□□ -0.82
CD28-201ENST00000324106 MAGEF1Q9HAY2 307 aa9.92□□□□□ -0.82
CD28-201ENST00000324106 PODXL2Q9NZ53 605 aa9.92□□□□□ -0.82
CD28-201ENST00000324106 TYW5A2RUC4 315 aaKnown RBP9.92□□□□□ -0.82
CD28-201ENST00000324106 AKR1B15C9JRZ8 316 aaPredicted RBP9.92□□□□□ -0.82
CD28-201ENST00000324106 LAD1O00515 517 aa9.92□□□□□ -0.82
CD28-201ENST00000324106 FDX1P10109 184 aa9.92□□□□□ -0.82
CD28-201ENST00000324106 TRAPPC10P48553 1259 aa9.92□□□□□ -0.82
CD28-201ENST00000324106 MIS18BP1Q6P0N0 1132 aa9.92□□□□□ -0.82
CD28-201ENST00000324106 SND1Q7KZF4 910 aaKnown RBP eCLIP9.92□□□□□ -0.82
CD28-201ENST00000324106 CCDC63Q8NA47 563 aa9.92□□□□□ -0.82
CD28-201ENST00000324106 CCDC26Q8TAB7 109 aa9.92□□□□□ -0.82
CD28-201ENST00000324106 FAM107BQ9H098 131 aa9.92□□□□□ -0.82
CD28-201ENST00000324106 NSRP1Q9H0G5 558 aaKnown RBP9.92□□□□□ -0.82
CD28-201ENST00000324106 DDX25Q9UHL0 483 aaKnown RBP9.92□□□□□ -0.82
CD28-201ENST00000324106 TLR3O15455 904 aaKnown RBP9.92□□□□□ -0.82
CD28-201ENST00000324106 GNAT1P11488 350 aa9.92□□□□□ -0.82
CD28-201ENST00000324106 ZNF365Q70YC5 407 aa9.92□□□□□ -0.82
CD28-201ENST00000324106 KCNJ14Q9UNX9 436 aa9.92□□□□□ -0.82
CD28-201ENST00000324106 CTNND2Q9UQB3 1225 aa9.92□□□□□ -0.82
CD28-201ENST00000324106 ZMYM6O95789 1325 aa9.92□□□□□ -0.82
CD28-201ENST00000324106 PREX2Q70Z35 1606 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 CAPN9O14815 690 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 GIPC1O14908 333 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 CCND2P30279 289 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 VAV2P52735 878 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 SUSD4Q5VX71 490 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 NOSTRINQ8IVI9 506 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 MYOCDQ8IZQ8 938 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 MAIP1Q8WWC4 291 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 TBC1D31Q96DN5 1066 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 C1orf112Q9NSG2 853 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 SYNRGQ9UMZ2 1314 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 COL15A1P39059 1388 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 CRB1P82279 1406 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 CYP27B1O15528 508 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 PTPREP23469 700 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 LRCH2Q5VUJ6 765 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 METTL23Q86XA0 190 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 PROCA1Q8NCQ7 364 aaPredicted RBP9.91□□□□□ -0.82
CD28-201ENST00000324106 MED10Q9BTT4 135 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 CDC42BPGQ6DT37 1551 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 XRCC5P13010 732 aaKnown RBP9.91□□□□□ -0.82
CD28-201ENST00000324106 EN1Q05925 392 aaPredicted RBP9.91□□□□□ -0.82
CD28-201ENST00000324106 PROSER3Q2NL68 480 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 ZMYM1Q5SVZ6 1142 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 CCDC186Q7Z3E2 898 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 SPICE1Q8N0Z3 855 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 RNF26Q9BY78 433 aaPredicted RBP9.91□□□□□ -0.82
CD28-201ENST00000324106 TPCN1Q9ULQ1 816 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 RNASELQ05823 741 aaKnown RBP9.91□□□□□ -0.82
CD28-201ENST00000324106 RASA3Q14644 834 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 PUS3Q9BZE2 481 aaKnown RBP9.91□□□□□ -0.82
CD28-201ENST00000324106 MTIF3Q9H2K0 278 aaKnown RBP9.91□□□□□ -0.82
CD28-201ENST00000324106 IFNKQ9P0W0 207 aa9.91□□□□□ -0.82
CD28-201ENST00000324106 CDK12Q9NYV4 1490 aaPredicted RBP9.91□□□□□ -0.82
CD28-201ENST00000324106 HSPA1LP34931 641 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 IGBP1P78318 339 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 SYNE4Q8N205 404 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 TTLL11Q8NHH1 800 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 GTF3C6Q969F1 213 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 ANO3Q9BYT9 981 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 FEZ2Q9UHY8 353 aaPredicted RBP9.9□□□□□ -0.82
CD28-201ENST00000324106 GOLGA6CA6NDK9 693 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 GOLGA6BA6NDN3 693 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 K7ENM7 598 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 ACTN4O43707 911 aaKnown RBP9.9□□□□□ -0.82
CD28-201ENST00000324106 GOLGA6DP0CG33 693 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 SYDE2Q5VT97 1194 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 MYSM1Q5VVJ2 828 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 CCT6BQ92526 530 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 EDC3Q96F86 508 aaKnown RBP9.9□□□□□ -0.82
CD28-201ENST00000324106 GOLGA6AQ9NYA3 693 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 DNAI1Q9UI46 699 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 GUCA1BQ9UMX6 200 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 AKT3Q9Y243 479 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 GCC2Q8IWJ2 1684 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 PPP2R3AQ06190 1150 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 CCDC122Q5T0U0 273 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 TMX1Q9H3N1 280 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 CUEDC2Q9H467 287 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 CTTNBP2NLQ9P2B4 639 aa9.9□□□□□ -0.82
CD28-201ENST00000324106 ARMCX3Q9UH62 379 aaPredicted RBP9.9□□□□□ -0.82
CD28-201ENST00000324106 SH3BP5O60239 455 aa9.9□□□□□ -0.83
CD28-201ENST00000324106 OPA1O60313 960 aa9.9□□□□□ -0.83
CD28-201ENST00000324106 OATP04181 439 aa9.9□□□□□ -0.83
CD28-201ENST00000324106 GABPAQ06546 454 aa9.9□□□□□ -0.83
CD28-201ENST00000324106 ARMCX5Q6P1M9 558 aa9.9□□□□□ -0.83
CD28-201ENST00000324106 NELFCDQ8IXH7 590 aa9.9□□□□□ -0.83
CD28-201ENST00000324106 ARFGAP2Q8N6H7 521 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms