RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 TSPY3P0CV98 308 aa14.7□□□□□ -0.06
TPM3-204ENST00000323144 TSPY8P0CW00 308 aa14.7□□□□□ -0.06
TPM3-204ENST00000323144 SLC4A3P48751 1232 aa14.7□□□□□ -0.06
TPM3-204ENST00000323144 LRRC41Q15345 812 aa14.7□□□□□ -0.06
TPM3-204ENST00000323144 LRRFIP1Q32MZ4 808 aaKnown RBP14.7□□□□□ -0.06
TPM3-204ENST00000323144 TRIM60Q495X7 471 aa14.7□□□□□ -0.06
TPM3-204ENST00000323144 ANKRD45Q5TZF3 282 aa14.7□□□□□ -0.06
TPM3-204ENST00000323144 TDHQ8IZJ6 230 aa14.7□□□□□ -0.06
TPM3-204ENST00000323144 CPXCR1Q8N123 301 aa14.7□□□□□ -0.06
TPM3-204ENST00000323144 GMCL1P1Q8NEA9 526 aa14.7□□□□□ -0.06
TPM3-204ENST00000323144 NEDD1Q8NHV4 660 aa14.7□□□□□ -0.06
TPM3-204ENST00000323144 FAM227BQ96M60 508 aa14.7□□□□□ -0.06
TPM3-204ENST00000323144 FGD4Q96M96 766 aa14.7□□□□□ -0.06
TPM3-204ENST00000323144 NACAP1Q9BZK3 213 aa14.7□□□□□ -0.06
TPM3-204ENST00000323144 UBE2OQ9C0C9 1292 aaKnown RBP14.7□□□□□ -0.06
TPM3-204ENST00000323144 RAVER2Q9HCJ3 691 aaKnown RBP14.7□□□□□ -0.06
TPM3-204ENST00000323144 INCENPQ9NQS7 918 aa14.7□□□□□ -0.06
TPM3-204ENST00000323144 SLC5A4Q9NY91 659 aa14.7□□□□□ -0.06
TPM3-204ENST00000323144 ISY1Q9ULR0 285 aaKnown RBP14.7□□□□□ -0.06
TPM3-204ENST00000323144 PGK1P00558 417 aa14.69□□□□□ -0.06
TPM3-204ENST00000323144 COPB2P35606 906 aa14.69□□□□□ -0.06
TPM3-204ENST00000323144 PDE1AP54750 535 aa14.69□□□□□ -0.06
TPM3-204ENST00000323144 TFAP4Q01664 338 aa14.69□□□□□ -0.06
TPM3-204ENST00000323144 HDAC1Q13547 482 aaPredicted RBP14.69□□□□□ -0.06
TPM3-204ENST00000323144 Q7L0L9 218 aa14.69□□□□□ -0.06
TPM3-204ENST00000323144 ZNF589Q86UQ0 364 aaPredicted RBP14.69□□□□□ -0.06
TPM3-204ENST00000323144 ZNF444Q8N0Y2 327 aaPredicted RBP14.69□□□□□ -0.06
TPM3-204ENST00000323144 FERMT2Q96AC1 680 aa14.69□□□□□ -0.06
TPM3-204ENST00000323144 TINF2Q9BSI4 451 aa14.69□□□□□ -0.06
TPM3-204ENST00000323144 SLC38A10Q9HBR0 1119 aa14.69□□□□□ -0.06
TPM3-204ENST00000323144 XPNPEP3Q9NQH7 507 aa14.69□□□□□ -0.06
TPM3-204ENST00000323144 COL6A3P12111 3177 aa14.69□□□□□ -0.06
TPM3-204ENST00000323144 SYNRGQ9UMZ2 1314 aa14.68□□□□□ -0.06
TPM3-204ENST00000323144 LAMA2P24043 3122 aaKnown RBP14.68□□□□□ -0.06
TPM3-204ENST00000323144 DNAJC25-GNG10A0A024R161 153 aa14.68□□□□□ -0.06
TPM3-204ENST00000323144 ADCY6O43306 1168 aa14.68□□□□□ -0.06
TPM3-204ENST00000323144 ZNF865P0CJ78 1059 aaPredicted RBP14.68□□□□□ -0.06
TPM3-204ENST00000323144 ADCYAP1R1P41586 468 aa14.68□□□□□ -0.06
TPM3-204ENST00000323144 PDE4BQ07343 736 aa14.68□□□□□ -0.06
TPM3-204ENST00000323144 SNX17Q15036 470 aa14.68□□□□□ -0.06
TPM3-204ENST00000323144 SLFN13Q68D06 897 aa14.68□□□□□ -0.06
TPM3-204ENST00000323144 LNPKQ9C0E8 428 aa14.68□□□□□ -0.06
TPM3-204ENST00000323144 ZNF287Q9HBT7 754 aa14.68□□□□□ -0.06
TPM3-204ENST00000323144 PRDM5Q9NQX1 630 aaPredicted RBP14.68□□□□□ -0.06
TPM3-204ENST00000323144 HOMER2Q9NSB8 354 aa14.68□□□□□ -0.06
TPM3-204ENST00000323144 MYADML2A6NDP7 307 aa14.67□□□□□ -0.06
TPM3-204ENST00000323144 ATP2A1O14983 1001 aa14.67□□□□□ -0.06
TPM3-204ENST00000323144 BMP3P12645 472 aa14.67□□□□□ -0.06
TPM3-204ENST00000323144 SNAP25P60880 206 aa14.67□□□□□ -0.06
TPM3-204ENST00000323144 IRX5P78411 483 aaPredicted RBP14.67□□□□□ -0.06
TPM3-204ENST00000323144 PRPF38AQ8NAV1 312 aaKnown RBP14.67□□□□□ -0.06
TPM3-204ENST00000323144 MKL1Q969V6 931 aa14.67□□□□□ -0.06
TPM3-204ENST00000323144 EVI5LQ96CN4 794 aa14.67□□□□□ -0.06
TPM3-204ENST00000323144 PDLIM7Q9NR12 457 aa14.67□□□□□ -0.06
TPM3-204ENST00000323144 IL17RBQ9NRM6 502 aa14.67□□□□□ -0.06
TPM3-204ENST00000323144 FEM1BQ9UK73 627 aa14.67□□□□□ -0.06
TPM3-204ENST00000323144 ZHX1Q9UKY1 873 aaPredicted RBP14.67□□□□□ -0.06
TPM3-204ENST00000323144 SYNPO2Q9UMS6 1093 aa14.67□□□□□ -0.06
TPM3-204ENST00000323144 MTMR7Q9Y216 660 aa14.67□□□□□ -0.06
TPM3-204ENST00000323144 DIS3Q9Y2L1 958 aaKnown RBP14.67□□□□□ -0.06
TPM3-204ENST00000323144 ZNF536O15090 1300 aa14.66□□□□□ -0.06
TPM3-204ENST00000323144 TSPY2A6NKD2 308 aa14.66□□□□□ -0.06
TPM3-204ENST00000323144 TMEM232C9JQI7 657 aa14.66□□□□□ -0.06
TPM3-204ENST00000323144 ADAMTS4O75173 837 aa14.66□□□□□ -0.06
TPM3-204ENST00000323144 RARBP10826 455 aa14.66□□□□□ -0.06
TPM3-204ENST00000323144 AKR1A1P14550 325 aa14.66□□□□□ -0.06
TPM3-204ENST00000323144 STAT2P52630 851 aa14.66□□□□□ -0.06
TPM3-204ENST00000323144 NMIQ13287 307 aaPredicted RBP14.66□□□□□ -0.06
TPM3-204ENST00000323144 SLC39A5Q6ZMH5 540 aa14.66□□□□□ -0.06
TPM3-204ENST00000323144 KCTD1Q719H9 257 aa14.66□□□□□ -0.06
TPM3-204ENST00000323144 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.66□□□□□ -0.06
TPM3-204ENST00000323144 ARRDC4Q8NCT1 418 aa14.66□□□□□ -0.06
TPM3-204ENST00000323144 GMCL1Q96IK5 515 aa14.66□□□□□ -0.06
TPM3-204ENST00000323144 NRBP1Q9UHY1 535 aa14.66□□□□□ -0.06
TPM3-204ENST00000323144 STX8Q9UNK0 236 aa14.66□□□□□ -0.06
TPM3-204ENST00000323144 PHF24Q9UPV7 400 aa14.66□□□□□ -0.06
TPM3-204ENST00000323144 DDX49Q9Y6V7 483 aaKnown RBP14.66□□□□□ -0.06
TPM3-204ENST00000323144 ASTN1O14525 1302 aa14.66□□□□□ -0.06
TPM3-204ENST00000323144 SYNGAP1Q96PV0 1343 aa14.66□□□□□ -0.06
TPM3-204ENST00000323144 MYH6P13533 1939 aa14.65□□□□□ -0.06
TPM3-204ENST00000323144 A0A1W2PQ45 241 aaPredicted RBP14.65□□□□□ -0.06
TPM3-204ENST00000323144 A0A1W2PQY0 241 aa14.65□□□□□ -0.06
TPM3-204ENST00000323144 ZBED4O75132 1171 aa14.65□□□□□ -0.06
TPM3-204ENST00000323144 SNAI1O95863 264 aaPredicted RBP14.65□□□□□ -0.06
TPM3-204ENST00000323144 SLC3A2P08195 630 aaKnown RBP14.65□□□□□ -0.06
TPM3-204ENST00000323144 IKQ13123 557 aaPredicted RBP14.65□□□□□ -0.06
TPM3-204ENST00000323144 LRIT3Q3SXY7 679 aa14.65□□□□□ -0.06
TPM3-204ENST00000323144 SH3RF1Q7Z6J0 888 aa14.65□□□□□ -0.06
TPM3-204ENST00000323144 TBC1D10CQ8IV04 446 aa14.65□□□□□ -0.06
TPM3-204ENST00000323144 RNF146Q9NTX7 359 aa14.65□□□□□ -0.06
TPM3-204ENST00000323144 ZBTB47Q9UFB7 747 aaPredicted RBP14.65□□□□□ -0.06
TPM3-204ENST00000323144 CNPY2Q9Y2B0 182 aa14.65□□□□□ -0.06
TPM3-204ENST00000323144 CTDP1Q9Y5B0 961 aaPredicted RBP14.65□□□□□ -0.06
TPM3-204ENST00000323144 ZMYM6O95789 1325 aa14.65□□□□□ -0.06
TPM3-204ENST00000323144 CCDC171Q6TFL3 1326 aa14.65□□□□□ -0.06
TPM3-204ENST00000323144 GBF1Q92538 1859 aa14.64□□□□□ -0.07
TPM3-204ENST00000323144 PTGS1P23219 599 aa14.64□□□□□ -0.07
TPM3-204ENST00000323144 MCCP23508 829 aa14.64□□□□□ -0.07
TPM3-204ENST00000323144 HAND2P61296 217 aa14.64□□□□□ -0.07
TPM3-204ENST00000323144 CNTN2Q02246 1040 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms