RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 SPDYE2BA6NHP3 402 aa10.41□□□□□ -0.74
CD46-202ENST00000322918 SPDYE6P0CI01 402 aa10.41□□□□□ -0.74
CD46-202ENST00000322918 CMA1P23946 247 aa10.41□□□□□ -0.74
CD46-202ENST00000322918 ECE1P42892 770 aa10.41□□□□□ -0.74
CD46-202ENST00000322918 SLC1A4P43007 532 aa10.41□□□□□ -0.74
CD46-202ENST00000322918 GNAQP50148 359 aa10.41□□□□□ -0.74
CD46-202ENST00000322918 ZNF70Q9UC06 446 aaPredicted RBP10.41□□□□□ -0.74
CD46-202ENST00000322918 SERTAD1Q9UHV2 236 aa10.41□□□□□ -0.74
CD46-202ENST00000322918 LRRC37AA6NMS7 1700 aa10.41□□□□□ -0.74
CD46-202ENST00000322918 LTBP1Q14766 1721 aa10.41□□□□□ -0.74
CD46-202ENST00000322918 NRXN2Q9P2S2 1712 aa10.41□□□□□ -0.74
CD46-202ENST00000322918 PP2D1A8MPX8 630 aa10.4□□□□□ -0.74
CD46-202ENST00000322918 PRKG1Q13976 671 aa10.4□□□□□ -0.74
CD46-202ENST00000322918 PTPN21Q16825 1174 aa10.4□□□□□ -0.74
CD46-202ENST00000322918 C10orf71Q711Q0 1435 aa10.4□□□□□ -0.74
CD46-202ENST00000322918 AOPEPQ8N6M6 819 aa10.4□□□□□ -0.74
CD46-202ENST00000322918 FAM200AQ8TCP9 573 aa10.4□□□□□ -0.74
CD46-202ENST00000322918 TCP11L1Q9NUJ3 509 aa10.4□□□□□ -0.74
CD46-202ENST00000322918 FBXO2Q9UK22 296 aaPredicted RBP10.4□□□□□ -0.74
CD46-202ENST00000322918 MAST2Q6P0Q8 1798 aa10.4□□□□□ -0.74
CD46-202ENST00000322918 COL4A5P29400 1685 aa10.4□□□□□ -0.74
CD46-202ENST00000322918 STXBP3O00186 592 aa10.4□□□□□ -0.74
CD46-202ENST00000322918 NFKBIEO00221 500 aa10.4□□□□□ -0.74
CD46-202ENST00000322918 DHX8Q14562 1220 aaKnown RBP10.4□□□□□ -0.74
CD46-202ENST00000322918 CCDC178Q5BJE1 867 aa10.4□□□□□ -0.74
CD46-202ENST00000322918 ADGRF4Q8IZF3 695 aa10.4□□□□□ -0.74
CD46-202ENST00000322918 GJA10Q969M2 543 aa10.4□□□□□ -0.74
CD46-202ENST00000322918 TRIM5Q9C035 493 aa10.4□□□□□ -0.74
CD46-202ENST00000322918 DDX60LQ5H9U9 1706 aaKnown RBP10.4□□□□□ -0.74
CD46-202ENST00000322918 A0A1W2PQ27 194 aa10.4□□□□□ -0.75
CD46-202ENST00000322918 A0A1W2PQ64 194 aa10.4□□□□□ -0.75
CD46-202ENST00000322918 A0A1W2PQD8 194 aa10.4□□□□□ -0.75
CD46-202ENST00000322918 GOLGA6L19H0YKK7 550 aa10.4□□□□□ -0.75
CD46-202ENST00000322918 CCNT1O60563 726 aaKnown RBP10.4□□□□□ -0.75
CD46-202ENST00000322918 COBLO75128 1261 aa10.4□□□□□ -0.75
CD46-202ENST00000322918 CIAPIN1Q6FI81 312 aa10.4□□□□□ -0.75
CD46-202ENST00000322918 SYMPKQ92797 1274 aaKnown RBP10.4□□□□□ -0.75
CD46-202ENST00000322918 PCDHA4Q9UN74 947 aa10.4□□□□□ -0.75
CD46-202ENST00000322918 NID2Q14112 1375 aa10.39□□□□□ -0.75
CD46-202ENST00000322918 PPP6R2O75170 966 aa10.39□□□□□ -0.75
CD46-202ENST00000322918 PRR29P0C7W0 189 aa10.39□□□□□ -0.75
CD46-202ENST00000322918 TNNI2P48788 182 aa10.39□□□□□ -0.75
CD46-202ENST00000322918 DGKZQ13574 1117 aa10.39□□□□□ -0.75
CD46-202ENST00000322918 SLFN13Q68D06 897 aa10.39□□□□□ -0.75
CD46-202ENST00000322918 ARHGAP27Q6ZUM4 889 aa10.39□□□□□ -0.75
CD46-202ENST00000322918 ACER1Q8TDN7 264 aa10.39□□□□□ -0.75
CD46-202ENST00000322918 PSMD1Q99460 953 aa10.39□□□□□ -0.75
CD46-202ENST00000322918 DHX36Q9H2U1 1008 aaKnown RBP10.39□□□□□ -0.75
CD46-202ENST00000322918 BARHL2Q9NY43 387 aa10.39□□□□□ -0.75
CD46-202ENST00000322918 KIAA1468Q9P260 1216 aa10.39□□□□□ -0.75
CD46-202ENST00000322918 SWAP70Q9UH65 585 aa10.39□□□□□ -0.75
CD46-202ENST00000322918 PCDHA6Q9UN73 950 aa10.39□□□□□ -0.75
CD46-202ENST00000322918 PCDHA8Q9Y5H6 950 aa10.39□□□□□ -0.75
CD46-202ENST00000322918 MYH6P13533 1939 aa10.39□□□□□ -0.75
CD46-202ENST00000322918 WNT10BO00744 389 aa10.39□□□□□ -0.75
CD46-202ENST00000322918 CUTAO60888 179 aa10.39□□□□□ -0.75
CD46-202ENST00000322918 VIL1P09327 827 aaKnown RBP10.39□□□□□ -0.75
CD46-202ENST00000322918 RESP18Q5W5W9 173 aa10.39□□□□□ -0.75
CD46-202ENST00000322918 A0A087X0B3 334 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 TMEM232C9JQI7 657 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 CALML3P27482 149 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 DLK2Q6UY11 383 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 ANKS1AQ92625 1134 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 ZFP91Q96JP5 570 aaPredicted RBP10.38□□□□□ -0.75
CD46-202ENST00000322918 IDI2Q9BXS1 227 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 TTC12Q9H892 705 aaPredicted RBP10.38□□□□□ -0.75
CD46-202ENST00000322918 JMJD4Q9H9V9 463 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 CEP131Q9UPN4 1083 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 LAMB1P07942 1786 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 USP17L15C9J2P7 530 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 USP17L13C9JLJ4 530 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 USP17L11C9JVI0 530 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 USP17L18D6R9N7 530 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 USP17L22D6RA61 530 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 USP17L17D6RBQ6 530 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 USP17L19D6RCP7 530 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 USP17L20D6RJB6 530 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 F5H6K3 240 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 MYO1BO43795 1136 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 PTPREP23469 700 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 KLRC3Q07444 240 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 ZNF543Q08ER8 600 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 USP17L24Q0WX57 530 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 STX1AQ16623 288 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 USP17L6PQ6QN14 398 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 CREBRFQ8IUR6 639 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 GLIS2Q9BZE0 524 aaPredicted RBP10.38□□□□□ -0.75
CD46-202ENST00000322918 BLZF1Q9H2G9 400 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 TMEM60Q9H2L4 133 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 A0A1W2PRG0 241 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 KLHL10Q6JEL2 608 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 METTL16Q86W50 562 aaKnown RBP10.38□□□□□ -0.75
CD46-202ENST00000322918 C17orf53Q8N3J3 647 aaPredicted RBP10.38□□□□□ -0.75
CD46-202ENST00000322918 BBXQ8WY36 941 aaPredicted RBP10.38□□□□□ -0.75
CD46-202ENST00000322918 TNFRSF25Q93038 417 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 PCDHA5Q9Y5H7 936 aa10.38□□□□□ -0.75
CD46-202ENST00000322918 ECM29Q5VYK3 1845 aa10.37□□□□□ -0.75
CD46-202ENST00000322918 PPP1R11O60927 126 aaPredicted RBP10.37□□□□□ -0.75
CD46-202ENST00000322918 GMPSP49915 693 aaPredicted RBP10.37□□□□□ -0.75
CD46-202ENST00000322918 PRELPP51888 382 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms