RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 CTNND2Q9UQB3 1225 aa8.73□□□□□ -1.01
CD46-201ENST00000322875 XDHP47989 1333 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 KCNJ18B7U540 433 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 DNM1LO00429 736 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 PDHBP11177 359 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 SLC8A3P57103 927 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 CDK17Q00537 523 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 CTDSPL2Q05D32 466 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 XRCC4Q13426 336 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 BYSLQ13895 437 aaKnown RBP8.72□□□□□ -1.01
CD46-201ENST00000322875 TRIM29Q14134 588 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 KCNJ12Q14500 433 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 SNCBQ16143 134 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 PPP4R3AQ6IN85 833 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 TAX1BP1Q86VP1 789 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 VPS16Q9H269 839 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 CHD4Q14839 1912 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 C5orf60A6NFR6 353 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 H7C1W4 665 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 TOM1O60784 492 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 HSF2BPO75031 334 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 CIAO1O76071 339 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 KRT14P02533 472 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 RXRAP19793 462 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 IL15P40933 162 aaPredicted RBP8.72□□□□□ -1.01
CD46-201ENST00000322875 LIFRP42702 1097 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 ANKRD13DQ6ZTN6 518 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 FMNL3Q8IVF7 1028 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 CCDC170Q8IYT3 715 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 TAB2Q9NYJ8 693 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 TPX2Q9ULW0 747 aaKnown RBP8.72□□□□□ -1.01
CD46-201ENST00000322875 DUSP10Q9Y6W6 482 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 PDS5AQ29RF7 1337 aaKnown RBP8.72□□□□□ -1.01
CD46-201ENST00000322875 KLHL33A6NCF5 533 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 LGALS16A8MUM7 142 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 ZNF263O14978 683 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 ZBTB43O43298 467 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 NBPF20Q3BBV1 942 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 GLE1Q53GS7 698 aaKnown RBP8.72□□□□□ -1.01
CD46-201ENST00000322875 LMBR1LQ6UX01 489 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 SHISA4Q96DD7 197 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 EPSTI1Q96J88 318 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 MTRQ99707 1265 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 CEP131Q9UPN4 1083 aa8.72□□□□□ -1.01
CD46-201ENST00000322875 IDEP14735 1019 aa8.71□□□□□ -1.01
CD46-201ENST00000322875 NR1D1P20393 614 aa8.71□□□□□ -1.01
CD46-201ENST00000322875 ATP1A2P50993 1020 aa8.71□□□□□ -1.01
CD46-201ENST00000322875 SEC24CP53992 1094 aa8.71□□□□□ -1.01
CD46-201ENST00000322875 SSRP1Q08945 709 aaKnown RBP8.71□□□□□ -1.01
CD46-201ENST00000322875 ANKRD20A8PQ5CZ79 823 aa8.71□□□□□ -1.01
CD46-201ENST00000322875 TTLL7Q6ZT98 887 aa8.71□□□□□ -1.01
CD46-201ENST00000322875 CYFIP2Q96F07 1278 aa8.71□□□□□ -1.01
CD46-201ENST00000322875 NEUROD6Q96NK8 337 aa8.71□□□□□ -1.01
CD46-201ENST00000322875 TRIM6Q9C030 488 aaPredicted RBP8.71□□□□□ -1.01
CD46-201ENST00000322875 TAOK2Q9UL54 1235 aa8.71□□□□□ -1.01
CD46-201ENST00000322875 ZNF335Q9H4Z2 1342 aaPredicted RBP8.71□□□□□ -1.02
CD46-201ENST00000322875 LCA5LO95447 670 aa8.71□□□□□ -1.02
CD46-201ENST00000322875 AFMP43652 599 aa8.71□□□□□ -1.02
CD46-201ENST00000322875 RCSD1Q6JBY9 416 aa8.71□□□□□ -1.02
CD46-201ENST00000322875 CCDC70Q6NSX1 233 aa8.71□□□□□ -1.02
CD46-201ENST00000322875 PDXDC2PQ6P474 469 aa8.71□□□□□ -1.02
CD46-201ENST00000322875 WASF1Q92558 559 aa8.71□□□□□ -1.02
CD46-201ENST00000322875 ATP6V1G3Q96LB4 118 aa8.71□□□□□ -1.02
CD46-201ENST00000322875 SLC12A6Q9UHW9 1150 aa8.71□□□□□ -1.02
CD46-201ENST00000322875 LUC7L2Q9Y383 392 aaKnown RBP8.71□□□□□ -1.02
CD46-201ENST00000322875 GPAA1O43292 621 aa8.71□□□□□ -1.02
CD46-201ENST00000322875 VAV2P52735 878 aa8.71□□□□□ -1.02
CD46-201ENST00000322875 ATP2B2Q01814 1243 aa8.71□□□□□ -1.02
CD46-201ENST00000322875 PPARAQ07869 468 aa8.71□□□□□ -1.02
CD46-201ENST00000322875 IFT88Q13099 833 aa8.71□□□□□ -1.02
CD46-201ENST00000322875 PAK1Q13153 545 aa8.71□□□□□ -1.02
CD46-201ENST00000322875 NR5A1Q13285 461 aa8.71□□□□□ -1.02
CD46-201ENST00000322875 CDCA2Q69YH5 1023 aaPredicted RBP8.71□□□□□ -1.02
CD46-201ENST00000322875 MICU3Q86XE3 530 aa8.71□□□□□ -1.02
CD46-201ENST00000322875 CAGE1Q8TC20 777 aa8.71□□□□□ -1.02
CD46-201ENST00000322875 ZNF483Q8TF39 744 aaPredicted RBP8.71□□□□□ -1.02
CD46-201ENST00000322875 SYMPKQ92797 1274 aaKnown RBP8.71□□□□□ -1.02
CD46-201ENST00000322875 NHEJ1Q9H9Q4 299 aaPredicted RBP8.71□□□□□ -1.02
CD46-201ENST00000322875 EBF2Q9HAK2 575 aa8.71□□□□□ -1.02
CD46-201ENST00000322875 KCNJ14Q9UNX9 436 aa8.71□□□□□ -1.02
CD46-201ENST00000322875 SOS2Q07890 1332 aaPredicted RBP8.7□□□□□ -1.02
CD46-201ENST00000322875 GOLGA8AA7E2F4 631 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 HMGB1P1B2RPK0 211 aaPredicted RBP8.7□□□□□ -1.02
CD46-201ENST00000322875 EYA2O00167 538 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 COBLO75128 1261 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 DNAJC8O75937 253 aaPredicted RBP8.7□□□□□ -1.02
CD46-201ENST00000322875 PAEPP09466 180 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 FAM153BP0C7A2 387 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 SLC7A5Q01650 507 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 UBXN1Q04323 297 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 ICA1Q05084 483 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 FAM153CQ494X1 144 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 LRRC24Q50LG9 513 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 KCTD16Q68DU8 428 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 NAIF1Q69YI7 327 aaPredicted RBP8.7□□□□□ -1.02
CD46-201ENST00000322875 ZNF790Q6PG37 636 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 TRIM58Q8NG06 486 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 RNF217Q8TC41 542 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 OXER1Q8TDS5 423 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 OSBPL9Q96SU4 736 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms