RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 CHMLP26374 656 aa14.35□□□□□ -0.11
ABCD3-201ENST00000315713 ICA1Q05084 483 aa14.35□□□□□ -0.11
ABCD3-201ENST00000315713 CTDSPL2Q05D32 466 aa14.35□□□□□ -0.11
ABCD3-201ENST00000315713 DPP9Q86TI2 863 aa14.35□□□□□ -0.11
ABCD3-201ENST00000315713 SPATC1LQ9H0A9 340 aa14.35□□□□□ -0.11
ABCD3-201ENST00000315713 ARHGEF10LQ9HCE6 1279 aa14.35□□□□□ -0.11
ABCD3-201ENST00000315713 ZMYM6O95789 1325 aa14.35□□□□□ -0.11
ABCD3-201ENST00000315713 KBTBD13C9JR72 458 aa14.34□□□□□ -0.11
ABCD3-201ENST00000315713 POTEB2H3BUK9 544 aa14.34□□□□□ -0.11
ABCD3-201ENST00000315713 COBLO75128 1261 aa14.34□□□□□ -0.11
ABCD3-201ENST00000315713 MYCNP04198 464 aaPredicted RBP14.34□□□□□ -0.11
ABCD3-201ENST00000315713 ERCC3P19447 782 aa14.34□□□□□ -0.11
ABCD3-201ENST00000315713 TRIM60Q495X7 471 aa14.34□□□□□ -0.11
ABCD3-201ENST00000315713 BMP2KLQ5H9B9 411 aa14.34□□□□□ -0.11
ABCD3-201ENST00000315713 OLFML2BQ68BL8 750 aa14.34□□□□□ -0.11
ABCD3-201ENST00000315713 FAM109BQ6ICB4 259 aaPredicted RBP14.34□□□□□ -0.11
ABCD3-201ENST00000315713 PRDM5Q9NQX1 630 aaPredicted RBP14.34□□□□□ -0.11
ABCD3-201ENST00000315713 TOMM22Q9NS69 142 aa14.34□□□□□ -0.11
ABCD3-201ENST00000315713 PRKAG2Q9UGJ0 569 aa14.34□□□□□ -0.11
ABCD3-201ENST00000315713 TSPY3P0CV98 308 aa14.33□□□□□ -0.12
ABCD3-201ENST00000315713 TSPY8P0CW00 308 aa14.33□□□□□ -0.12
ABCD3-201ENST00000315713 HAND2P61296 217 aa14.33□□□□□ -0.12
ABCD3-201ENST00000315713 PLS1Q14651 629 aa14.33□□□□□ -0.12
ABCD3-201ENST00000315713 COG2Q14746 738 aa14.33□□□□□ -0.12
ABCD3-201ENST00000315713 ZNF697Q5TEC3 545 aa14.33□□□□□ -0.12
ABCD3-201ENST00000315713 SAMD1Q6SPF0 538 aaPredicted RBP14.33□□□□□ -0.12
ABCD3-201ENST00000315713 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.33□□□□□ -0.12
ABCD3-201ENST00000315713 SPICE1Q8N0Z3 855 aa14.33□□□□□ -0.12
ABCD3-201ENST00000315713 SHCBP1Q8NEM2 672 aa14.33□□□□□ -0.12
ABCD3-201ENST00000315713 ATG4CQ96DT6 458 aa14.33□□□□□ -0.12
ABCD3-201ENST00000315713 DSCC1Q9BVC3 393 aa14.33□□□□□ -0.12
ABCD3-201ENST00000315713 COL25A1Q9BXS0 654 aaPredicted RBP14.33□□□□□ -0.12
ABCD3-201ENST00000315713 IL25Q9H293 177 aa14.33□□□□□ -0.12
ABCD3-201ENST00000315713 SH2D4AQ9H788 454 aa14.33□□□□□ -0.12
ABCD3-201ENST00000315713 KANSL2Q9H9L4 492 aa14.33□□□□□ -0.12
ABCD3-201ENST00000315713 ANAPC4Q9UJX5 808 aa14.33□□□□□ -0.12
ABCD3-201ENST00000315713 SPTBN5Q9NRC6 3674 aaKnown RBP14.32□□□□□ -0.12
ABCD3-201ENST00000315713 TTC28Q96AY4 2481 aa14.32□□□□□ -0.12
ABCD3-201ENST00000315713 ZNF213O14771 459 aa14.32□□□□□ -0.12
ABCD3-201ENST00000315713 SEPT4O43236 478 aa14.32□□□□□ -0.12
ABCD3-201ENST00000315713 FLOT1O75955 427 aa14.32□□□□□ -0.12
ABCD3-201ENST00000315713 SHHQ15465 462 aa14.32□□□□□ -0.12
ABCD3-201ENST00000315713 FAM47AQ5JRC9 791 aa14.32□□□□□ -0.12
ABCD3-201ENST00000315713 RRP12Q5JTH9 1297 aaKnown RBP14.32□□□□□ -0.12
ABCD3-201ENST00000315713 PRAMEF19Q5SWL8 479 aa14.32□□□□□ -0.12
ABCD3-201ENST00000315713 C9orf50Q5SZB4 431 aa14.32□□□□□ -0.12
ABCD3-201ENST00000315713 NCAPG2Q86XI2 1143 aa14.32□□□□□ -0.12
ABCD3-201ENST00000315713 PDLIM7Q9NR12 457 aa14.32□□□□□ -0.12
ABCD3-201ENST00000315713 LRRC37A2A6NM11 1700 aa14.32□□□□□ -0.12
ABCD3-201ENST00000315713 TSPY2A6NKD2 308 aa14.31□□□□□ -0.12
ABCD3-201ENST00000315713 STRNO43815 780 aa14.31□□□□□ -0.12
ABCD3-201ENST00000315713 RAD21O60216 631 aa14.31□□□□□ -0.12
ABCD3-201ENST00000315713 RANBP6O60518 1105 aaKnown RBP14.31□□□□□ -0.12
ABCD3-201ENST00000315713 EEF2P13639 858 aaKnown RBP14.31□□□□□ -0.12
ABCD3-201ENST00000315713 TFAP4Q01664 338 aa14.31□□□□□ -0.12
ABCD3-201ENST00000315713 SNX17Q15036 470 aa14.31□□□□□ -0.12
ABCD3-201ENST00000315713 LRRC41Q15345 812 aa14.31□□□□□ -0.12
ABCD3-201ENST00000315713 CASC1Q6TDU7 716 aa14.31□□□□□ -0.12
ABCD3-201ENST00000315713 SLC39A5Q6ZMH5 540 aa14.31□□□□□ -0.12
ABCD3-201ENST00000315713 MB21D1Q8N884 522 aa14.31□□□□□ -0.12
ABCD3-201ENST00000315713 ARRDC4Q8NCT1 418 aa14.31□□□□□ -0.12
ABCD3-201ENST00000315713 FERMT2Q96AC1 680 aa14.31□□□□□ -0.12
ABCD3-201ENST00000315713 INCENPQ9NQS7 918 aa14.31□□□□□ -0.12
ABCD3-201ENST00000315713 HOXC10Q9NYD6 342 aa14.31□□□□□ -0.12
ABCD3-201ENST00000315713 CTNNA3Q9UI47 895 aa14.31□□□□□ -0.12
ABCD3-201ENST00000315713 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.31□□□□□ -0.12
ABCD3-201ENST00000315713 SGSM2O43147 1006 aa14.3□□□□□ -0.12
ABCD3-201ENST00000315713 DSG3P32926 999 aa14.3□□□□□ -0.12
ABCD3-201ENST00000315713 ADCYAP1R1P41586 468 aa14.3□□□□□ -0.12
ABCD3-201ENST00000315713 IMMTQ16891 758 aaKnown RBP14.3□□□□□ -0.12
ABCD3-201ENST00000315713 MFSD6Q6ZSS7 791 aa14.3□□□□□ -0.12
ABCD3-201ENST00000315713 KIAA1211Q6ZU35 1233 aa14.3□□□□□ -0.12
ABCD3-201ENST00000315713 SH3RF1Q7Z6J0 888 aa14.3□□□□□ -0.12
ABCD3-201ENST00000315713 BADQ92934 168 aa14.3□□□□□ -0.12
ABCD3-201ENST00000315713 MAML3Q96JK9 1138 aa14.3□□□□□ -0.12
ABCD3-201ENST00000315713 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.3□□□□□ -0.12
ABCD3-201ENST00000315713 RNF41Q9H4P4 317 aaPredicted RBP14.3□□□□□ -0.12
ABCD3-201ENST00000315713 MROH8Q9H579 483 aa14.3□□□□□ -0.12
ABCD3-201ENST00000315713 TMX2Q9Y320 296 aa14.3□□□□□ -0.12
ABCD3-201ENST00000315713 ORC4O43929 436 aa14.29□□□□□ -0.12
ABCD3-201ENST00000315713 TMEM132BQ14DG7 1078 aa14.29□□□□□ -0.12
ABCD3-201ENST00000315713 AKNAD1Q5T1N1 836 aa14.29□□□□□ -0.12
ABCD3-201ENST00000315713 SIAH1Q8IUQ4 282 aa14.29□□□□□ -0.12
ABCD3-201ENST00000315713 TBC1D10CQ8IV04 446 aa14.29□□□□□ -0.12
ABCD3-201ENST00000315713 NEDD1Q8NHV4 660 aa14.29□□□□□ -0.12
ABCD3-201ENST00000315713 LENG1Q96BZ8 264 aaPredicted RBP14.29□□□□□ -0.12
ABCD3-201ENST00000315713 CEP95Q96GE4 821 aa14.29□□□□□ -0.12
ABCD3-201ENST00000315713 VCPKMTQ9H867 229 aa14.29□□□□□ -0.12
ABCD3-201ENST00000315713 GOPCQ9HD26 462 aa14.29□□□□□ -0.12
ABCD3-201ENST00000315713 PLIN4Q96Q06 1357 aa14.29□□□□□ -0.12
ABCD3-201ENST00000315713 LCTP09848 1927 aa14.29□□□□□ -0.12
ABCD3-201ENST00000315713 IGKV6D-41A0A0C4DH26 115 aa14.28□□□□□ -0.12
ABCD3-201ENST00000315713 TRIM43BA6NCK2 446 aa14.28□□□□□ -0.12
ABCD3-201ENST00000315713 WDR46O15213 610 aaKnown RBP14.28□□□□□ -0.12
ABCD3-201ENST00000315713 CDC45O75419 566 aa14.28□□□□□ -0.12
ABCD3-201ENST00000315713 TTLL1O95922 423 aa14.28□□□□□ -0.12
ABCD3-201ENST00000315713 PCP11498 1178 aaKnown RBP14.28□□□□□ -0.12
ABCD3-201ENST00000315713 MUC3AQ02505 3323 aa14.28□□□□□ -0.12
ABCD3-201ENST00000315713 PPP4R3BQ5MIZ7 849 aa14.28□□□□□ -0.12
ABCD3-201ENST00000315713 ABRAQ8N0Z2 381 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms