RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 PRKAB2O43741 272 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 DKC1O60832 514 aaKnown RBP eCLIP15.23■□□□□ 0.03
SPAST-201ENST00000315285 FERP16591 822 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 TOB2Q14106 344 aaPredicted RBP15.23■□□□□ 0.03
SPAST-201ENST00000315285 CPXCR1Q8N123 301 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 TEKT1Q969V4 418 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 EEF2KMTQ96G04 330 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 ARMCX3Q9UH62 379 aaPredicted RBP15.23■□□□□ 0.03
SPAST-201ENST00000315285 SPHKAPQ2M3C7 1700 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 PNPLA6Q8IY17 1366 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 IGKV5-2P06315 115 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 TCP1P17987 556 aaKnown RBP15.23■□□□□ 0.03
SPAST-201ENST00000315285 STAT1P42224 750 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 BTDP43251 543 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 CROCCP2Q86T23 111 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 PLEKHA4Q9H4M7 779 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 SEC31BQ9NQW1 1179 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 MKRN1Q9UHC7 482 aaKnown RBP15.23■□□□□ 0.03
SPAST-201ENST00000315285 CDC23Q9UJX2 597 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 SLFN14P0C7P3 912 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 MTMR3Q13615 1198 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 ARHGAP44Q17R89 818 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 EPHA10Q5JZY3 1008 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 GRAMD1CQ8IYS0 662 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 ZSWIM5Q9P217 1185 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 ZNF804BA4D1E1 1349 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 STRN3Q13033 797 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 ZSCAN26Q16670 478 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 PTPN21Q16825 1174 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 CEP128Q6ZU80 1094 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 POTEDQ86YR6 584 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 LCORLQ8N3X6 602 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 AIFM3Q96NN9 605 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 MAGEF1Q9HAY2 307 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 MAN1B1Q9UKM7 699 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 H7C1W4 665 aa15.22■□□□□ 0.03
SPAST-201ENST00000315285 SEMA3EO15041 775 aa15.22■□□□□ 0.03
SPAST-201ENST00000315285 CLUL1Q15846 466 aa15.22■□□□□ 0.03
SPAST-201ENST00000315285 SMYD4Q8IYR2 804 aaPredicted RBP15.22■□□□□ 0.03
SPAST-201ENST00000315285 CEP63Q96MT8 703 aa15.22■□□□□ 0.03
SPAST-201ENST00000315285 AGTPBP1Q9UPW5 1226 aa15.22■□□□□ 0.03
SPAST-201ENST00000315285 COBLO75128 1261 aa15.22■□□□□ 0.03
SPAST-201ENST00000315285 PRR16Q569H4 304 aa15.22■□□□□ 0.03
SPAST-201ENST00000315285 FAM26FQ5R3K3 315 aa15.22■□□□□ 0.03
SPAST-201ENST00000315285 U2AF1L4Q8WU68 220 aaKnown RBP15.22■□□□□ 0.03
SPAST-201ENST00000315285 TUBGCP2Q9BSJ2 902 aa15.22■□□□□ 0.03
SPAST-201ENST00000315285 PANK4Q9NVE7 773 aa15.22■□□□□ 0.03
SPAST-201ENST00000315285 GAS7O60861 476 aa15.22■□□□□ 0.03
SPAST-201ENST00000315285 LIFRP42702 1097 aa15.22■□□□□ 0.03
SPAST-201ENST00000315285 INTS8Q75QN2 995 aaKnown RBP15.22■□□□□ 0.03
SPAST-201ENST00000315285 GPHNQ9NQX3 736 aaPredicted RBP15.22■□□□□ 0.03
SPAST-201ENST00000315285 TXNDC16Q9P2K2 825 aa15.22■□□□□ 0.03
SPAST-201ENST00000315285 LRRC7Q96NW7 1537 aa15.22■□□□□ 0.03
SPAST-201ENST00000315285 ATP2B4P23634 1241 aa15.22■□□□□ 0.03
SPAST-201ENST00000315285 SRGAP1Q7Z6B7 1085 aa15.22■□□□□ 0.03
SPAST-201ENST00000315285 CCDC105Q8IYK2 499 aa15.22■□□□□ 0.03
SPAST-201ENST00000315285 RDH13Q8NBN7 331 aa15.22■□□□□ 0.03
SPAST-201ENST00000315285 MAK16Q9BXY0 300 aaKnown RBP15.22■□□□□ 0.03
SPAST-201ENST00000315285 AMFRQ9UKV5 643 aa15.22■□□□□ 0.03
SPAST-201ENST00000315285 ALDH3A1P30838 453 aa15.21■□□□□ 0.03
SPAST-201ENST00000315285 DYNLL1P63167 89 aaKnown RBP15.21■□□□□ 0.03
SPAST-201ENST00000315285 MAP3K9P80192 1104 aa15.21■□□□□ 0.03
SPAST-201ENST00000315285 KRT71Q3SY84 523 aa15.21■□□□□ 0.03
SPAST-201ENST00000315285 CNOT6LQ96LI5 555 aaKnown RBP15.21■□□□□ 0.03
SPAST-201ENST00000315285 LAMC1P11047 1609 aa15.21■□□□□ 0.03
SPAST-201ENST00000315285 CHD1O14646 1710 aa15.21■□□□□ 0.03
SPAST-201ENST00000315285 BUB1O43683 1085 aa15.21■□□□□ 0.03
SPAST-201ENST00000315285 NSMFQ6X4W1 530 aa15.21■□□□□ 0.03
SPAST-201ENST00000315285 SLC35F6Q8N357 371 aa15.21■□□□□ 0.03
SPAST-201ENST00000315285 ENOX1Q8TC92 643 aaKnown RBP15.21■□□□□ 0.03
SPAST-201ENST00000315285 CABS1Q96KC9 395 aa15.21■□□□□ 0.03
SPAST-201ENST00000315285 CUEDC2Q9H467 287 aa15.21■□□□□ 0.03
SPAST-201ENST00000315285 DDX25Q9UHL0 483 aaKnown RBP15.21■□□□□ 0.03
SPAST-201ENST00000315285 MED14O60244 1454 aa15.21■□□□□ 0.03
SPAST-201ENST00000315285 CDC42BPBQ9Y5S2 1711 aa15.21■□□□□ 0.03
SPAST-201ENST00000315285 LAD1O00515 517 aa15.21■□□□□ 0.03
SPAST-201ENST00000315285 KCNK3O14649 394 aa15.21■□□□□ 0.03
SPAST-201ENST00000315285 PPARDQ03181 441 aa15.21■□□□□ 0.03
SPAST-201ENST00000315285 RBL2Q08999 1139 aa15.21■□□□□ 0.03
SPAST-201ENST00000315285 CLEC17AQ6ZS10 378 aa15.21■□□□□ 0.03
SPAST-201ENST00000315285 RASGRP4Q8TDF6 673 aa15.21■□□□□ 0.03
SPAST-201ENST00000315285 PCDHA4Q9UN74 947 aa15.21■□□□□ 0.03
SPAST-201ENST00000315285 H0YIN7 160 aa15.21■□□□□ 0.02
SPAST-201ENST00000315285 GUCY2FP51841 1108 aa15.21■□□□□ 0.02
SPAST-201ENST00000315285 POLR2FP61218 127 aaKnown RBP15.21■□□□□ 0.02
SPAST-201ENST00000315285 MCTP2Q6DN12 878 aa15.21■□□□□ 0.02
SPAST-201ENST00000315285 SERPINA10Q9UK55 444 aa15.21■□□□□ 0.02
SPAST-201ENST00000315285 NCAPD2Q15021 1401 aa15.21■□□□□ 0.02
SPAST-201ENST00000315285 ARAP3Q8WWN8 1544 aa15.2■□□□□ 0.02
SPAST-201ENST00000315285 PHLPP2Q6ZVD8 1323 aa15.2■□□□□ 0.02
SPAST-201ENST00000315285 EEF1GP26641 437 aaKnown RBP15.2■□□□□ 0.02
SPAST-201ENST00000315285 USPL1Q5W0Q7 1092 aa15.2■□□□□ 0.02
SPAST-201ENST00000315285 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.2■□□□□ 0.02
SPAST-201ENST00000315285 PIH1D3Q9NQM4 214 aaKnown RBP15.2■□□□□ 0.02
SPAST-201ENST00000315285 ZDHHC9Q9Y397 364 aa15.2■□□□□ 0.02
SPAST-201ENST00000315285 SOS2Q07890 1332 aaPredicted RBP15.2■□□□□ 0.02
SPAST-201ENST00000315285 NPHP4O75161 1426 aaPredicted RBP15.2■□□□□ 0.02
SPAST-201ENST00000315285 LACTBP83111 547 aaPredicted RBP15.2■□□□□ 0.02
SPAST-201ENST00000315285 SLFN12Q8IYM2 578 aa15.2■□□□□ 0.02
SPAST-201ENST00000315285 RAB17Q9H0T7 212 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms