RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 FAM83BQ5T0W9 1011 aa9.73□□□□□ -0.85
TPM3-203ENST00000312970 TSHZ3Q63HK5 1081 aa9.73□□□□□ -0.85
TPM3-203ENST00000312970 RIOX2Q8IUF8 465 aa9.73□□□□□ -0.85
TPM3-203ENST00000312970 TDHQ8IZJ6 230 aa9.73□□□□□ -0.85
TPM3-203ENST00000312970 ZNF444Q8N0Y2 327 aaPredicted RBP9.73□□□□□ -0.85
TPM3-203ENST00000312970 STK11IPQ8N1F8 1099 aa9.73□□□□□ -0.85
TPM3-203ENST00000312970 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.73□□□□□ -0.85
TPM3-203ENST00000312970 KDM4CQ9H3R0 1056 aa9.73□□□□□ -0.85
TPM3-203ENST00000312970 FBXO28Q9NVF7 368 aa9.73□□□□□ -0.85
TPM3-203ENST00000312970 NYAP2Q9P242 653 aa9.73□□□□□ -0.85
TPM3-203ENST00000312970 PPP1R9AQ9ULJ8 1098 aa9.73□□□□□ -0.85
TPM3-203ENST00000312970 PCDHB15Q9Y5E8 787 aa9.73□□□□□ -0.85
TPM3-203ENST00000312970 TTC41PQ6P2S7 1318 aa9.73□□□□□ -0.85
TPM3-203ENST00000312970 F5H6K3 240 aa9.72□□□□□ -0.85
TPM3-203ENST00000312970 DNM1LO00429 736 aa9.72□□□□□ -0.85
TPM3-203ENST00000312970 GPAA1O43292 621 aa9.72□□□□□ -0.85
TPM3-203ENST00000312970 COPB2P35606 906 aa9.72□□□□□ -0.85
TPM3-203ENST00000312970 TDO2P48775 406 aa9.72□□□□□ -0.85
TPM3-203ENST00000312970 KLRC3Q07444 240 aa9.72□□□□□ -0.85
TPM3-203ENST00000312970 KCTD2Q14681 263 aa9.72□□□□□ -0.85
TPM3-203ENST00000312970 PRAMEF19Q5SWL8 479 aa9.72□□□□□ -0.85
TPM3-203ENST00000312970 GJC2Q5T442 439 aaPredicted RBP9.72□□□□□ -0.85
TPM3-203ENST00000312970 MAML3Q96JK9 1138 aa9.72□□□□□ -0.85
TPM3-203ENST00000312970 GUCD1Q96NT3 240 aa9.72□□□□□ -0.85
TPM3-203ENST00000312970 MMP19Q99542 508 aa9.72□□□□□ -0.85
TPM3-203ENST00000312970 UBE2OQ9C0C9 1292 aaKnown RBP9.72□□□□□ -0.85
TPM3-203ENST00000312970 CLIP2Q9UDT6 1046 aa9.72□□□□□ -0.85
TPM3-203ENST00000312970 DIS3Q9Y2L1 958 aaKnown RBP9.72□□□□□ -0.85
TPM3-203ENST00000312970 ZNFX1Q9P2E3 1918 aaKnown RBP9.72□□□□□ -0.85
TPM3-203ENST00000312970 KBTBD13C9JR72 458 aa9.71□□□□□ -0.86
TPM3-203ENST00000312970 POTEB2H3BUK9 544 aa9.71□□□□□ -0.86
TPM3-203ENST00000312970 M0R2C6 588 aa9.71□□□□□ -0.86
TPM3-203ENST00000312970 ATN1P54259 1190 aaPredicted RBP9.71□□□□□ -0.86
TPM3-203ENST00000312970 IFNL3Q8IZI9 196 aa9.71□□□□□ -0.86
TPM3-203ENST00000312970 PRPF38AQ8NAV1 312 aaKnown RBP9.71□□□□□ -0.86
TPM3-203ENST00000312970 MKL1Q969V6 931 aa9.71□□□□□ -0.86
TPM3-203ENST00000312970 SLF1Q9BQI6 1058 aa9.71□□□□□ -0.86
TPM3-203ENST00000312970 NACAP1Q9BZK3 213 aa9.71□□□□□ -0.86
TPM3-203ENST00000312970 PRDM6Q9NQX0 595 aa9.71□□□□□ -0.86
TPM3-203ENST00000312970 NRBP1Q9UHY1 535 aa9.71□□□□□ -0.86
TPM3-203ENST00000312970 ZNF214Q9UL59 606 aaPredicted RBP9.71□□□□□ -0.86
TPM3-203ENST00000312970 IGKV6D-41A0A0C4DH26 115 aa9.7□□□□□ -0.86
TPM3-203ENST00000312970 ZBED4O75132 1171 aa9.7□□□□□ -0.86
TPM3-203ENST00000312970 PRDM1O75626 825 aa9.7□□□□□ -0.86
TPM3-203ENST00000312970 PGK2P07205 417 aa9.7□□□□□ -0.86
TPM3-203ENST00000312970 SLC3A2P08195 630 aaKnown RBP9.7□□□□□ -0.86
TPM3-203ENST00000312970 MDM2Q00987 491 aaPredicted RBP9.7□□□□□ -0.86
TPM3-203ENST00000312970 PDE4BQ07343 736 aa9.7□□□□□ -0.86
TPM3-203ENST00000312970 ZNF792Q3KQV3 632 aa9.7□□□□□ -0.86
TPM3-203ENST00000312970 ANO1Q5XXA6 986 aa9.7□□□□□ -0.86
TPM3-203ENST00000312970 SLC39A5Q6ZMH5 540 aa9.7□□□□□ -0.86
TPM3-203ENST00000312970 REPS2Q8NFH8 660 aa9.7□□□□□ -0.86
TPM3-203ENST00000312970 PI4K2BQ8TCG2 481 aa9.7□□□□□ -0.86
TPM3-203ENST00000312970 FAM161BQ96MY7 647 aa9.7□□□□□ -0.86
TPM3-203ENST00000312970 NUP88Q99567 741 aaPredicted RBP9.7□□□□□ -0.86
TPM3-203ENST00000312970 LBHD1Q9BQE6 289 aaPredicted RBP9.7□□□□□ -0.86
TPM3-203ENST00000312970 TINF2Q9BSI4 451 aa9.7□□□□□ -0.86
TPM3-203ENST00000312970 FSD1Q9BTV5 496 aa9.7□□□□□ -0.86
TPM3-203ENST00000312970 EPB41L4AQ9HCS5 686 aaPredicted RBP9.7□□□□□ -0.86
TPM3-203ENST00000312970 MTMR4Q9NYA4 1195 aa9.7□□□□□ -0.86
TPM3-203ENST00000312970 PRKAG2Q9UGJ0 569 aa9.7□□□□□ -0.86
TPM3-203ENST00000312970 SYNPO2Q9UMS6 1093 aa9.7□□□□□ -0.86
TPM3-203ENST00000312970 CTDP1Q9Y5B0 961 aaPredicted RBP9.7□□□□□ -0.86
TPM3-203ENST00000312970 ROBO3Q96MS0 1386 aa9.7□□□□□ -0.86
TPM3-203ENST00000312970 A0A0G2JMZ2 1700 aa9.7□□□□□ -0.86
TPM3-203ENST00000312970 LTBP2Q14767 1821 aa9.7□□□□□ -0.86
TPM3-203ENST00000312970 ZNF236Q9UL36 1845 aa9.7□□□□□ -0.86
TPM3-203ENST00000312970 BDP1A6H8Y1 2624 aa9.69□□□□□ -0.86
TPM3-203ENST00000312970 TTLL1O95922 423 aa9.69□□□□□ -0.86
TPM3-203ENST00000312970 NDUFB10O96000 172 aa9.69□□□□□ -0.86
TPM3-203ENST00000312970 TSPY3P0CV98 308 aa9.69□□□□□ -0.86
TPM3-203ENST00000312970 TSPY8P0CW00 308 aa9.69□□□□□ -0.86
TPM3-203ENST00000312970 MX1P20591 662 aa9.69□□□□□ -0.86
TPM3-203ENST00000312970 ADCYAP1R1P41586 468 aa9.69□□□□□ -0.86
TPM3-203ENST00000312970 RTP1P59025 263 aa9.69□□□□□ -0.86
TPM3-203ENST00000312970 LRRC41Q15345 812 aa9.69□□□□□ -0.86
TPM3-203ENST00000312970 ZMYM1Q5SVZ6 1142 aa9.69□□□□□ -0.86
TPM3-203ENST00000312970 ANKRD45Q5TZF3 282 aa9.69□□□□□ -0.86
TPM3-203ENST00000312970 SNRNP48Q6IEG0 339 aaKnown RBP9.69□□□□□ -0.86
TPM3-203ENST00000312970 NEDD1Q8NHV4 660 aa9.69□□□□□ -0.86
TPM3-203ENST00000312970 OTUD7AQ8TE49 926 aaPredicted RBP9.69□□□□□ -0.86
TPM3-203ENST00000312970 DDX11Q96FC9 970 aa9.69□□□□□ -0.86
TPM3-203ENST00000312970 CEP95Q96GE4 821 aa9.69□□□□□ -0.86
TPM3-203ENST00000312970 SEC62Q99442 399 aaKnown RBP9.69□□□□□ -0.86
TPM3-203ENST00000312970 TEX13BQ9BXU2 312 aa9.69□□□□□ -0.86
TPM3-203ENST00000312970 NAPBQ9H115 298 aa9.69□□□□□ -0.86
TPM3-203ENST00000312970 FEM1BQ9UK73 627 aa9.69□□□□□ -0.86
TPM3-203ENST00000312970 COL11A1P12107 1806 aaPredicted RBP9.68□□□□□ -0.86
TPM3-203ENST00000312970 PARP14Q460N5 1801 aa9.68□□□□□ -0.86
TPM3-203ENST00000312970 ATP2A1O14983 1001 aa9.68□□□□□ -0.86
TPM3-203ENST00000312970 RARBP10826 455 aa9.68□□□□□ -0.86
TPM3-203ENST00000312970 SLC4A3P48751 1232 aa9.68□□□□□ -0.86
TPM3-203ENST00000312970 RRP1P56182 461 aaKnown RBP9.68□□□□□ -0.86
TPM3-203ENST00000312970 TFAP4Q01664 338 aa9.68□□□□□ -0.86
TPM3-203ENST00000312970 PPARAQ07869 468 aa9.68□□□□□ -0.86
TPM3-203ENST00000312970 FAM109BQ6ICB4 259 aaPredicted RBP9.68□□□□□ -0.86
TPM3-203ENST00000312970 RNF180Q86T96 592 aa9.68□□□□□ -0.86
TPM3-203ENST00000312970 CPXCR1Q8N123 301 aa9.68□□□□□ -0.86
TPM3-203ENST00000312970 MSL3Q8N5Y2 521 aaKnown RBP9.68□□□□□ -0.86
TPM3-203ENST00000312970 GMCL1P1Q8NEA9 526 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms