RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 HOMER2Q9NSB8 354 aa14.17□□□□□ -0.14
SCFD1-201ENST00000311943 PRR12Q9ULL5 1215 aa14.17□□□□□ -0.14
SCFD1-201ENST00000311943 ZNF536O15090 1300 aa14.17□□□□□ -0.14
SCFD1-201ENST00000311943 TNRC18O15417 2968 aaPredicted RBP14.17□□□□□ -0.14
SCFD1-201ENST00000311943 PNMA1Q8ND90 353 aa14.17□□□□□ -0.14
SCFD1-201ENST00000311943 PURBQ96QR8 312 aaKnown RBP14.17□□□□□ -0.14
SCFD1-201ENST00000311943 ADCY3O60266 1144 aa14.16□□□□□ -0.14
SCFD1-201ENST00000311943 COBLO75128 1261 aa14.16□□□□□ -0.14
SCFD1-201ENST00000311943 NBPF11Q86T75 865 aa14.16□□□□□ -0.14
SCFD1-201ENST00000311943 GMCL1Q96IK5 515 aa14.16□□□□□ -0.14
SCFD1-201ENST00000311943 KRT23Q9C075 422 aa14.16□□□□□ -0.14
SCFD1-201ENST00000311943 PCDH10Q9P2E7 1040 aa14.16□□□□□ -0.14
SCFD1-201ENST00000311943 GRK4P32298 578 aa14.15□□□□□ -0.14
SCFD1-201ENST00000311943 PKN2Q16513 984 aaKnown RBP14.15□□□□□ -0.14
SCFD1-201ENST00000311943 MORN1Q5T089 497 aa14.15□□□□□ -0.14
SCFD1-201ENST00000311943 SNRNP48Q6IEG0 339 aaKnown RBP14.15□□□□□ -0.14
SCFD1-201ENST00000311943 PLEKHH3Q7Z736 793 aa14.15□□□□□ -0.14
SCFD1-201ENST00000311943 IQCA1Q86XH1 822 aa14.15□□□□□ -0.14
SCFD1-201ENST00000311943 CCAR1Q8IX12 1150 aaKnown RBP14.15□□□□□ -0.14
SCFD1-201ENST00000311943 PRPF38AQ8NAV1 312 aaKnown RBP14.15□□□□□ -0.14
SCFD1-201ENST00000311943 NCOA7Q8NI08 942 aa14.15□□□□□ -0.14
SCFD1-201ENST00000311943 IGDCC4Q8TDY8 1250 aa14.15□□□□□ -0.14
SCFD1-201ENST00000311943 USP6NLQ92738 828 aa14.15□□□□□ -0.14
SCFD1-201ENST00000311943 COA7Q96BR5 231 aa14.15□□□□□ -0.14
SCFD1-201ENST00000311943 ZNF333Q96JL9 665 aa14.15□□□□□ -0.14
SCFD1-201ENST00000311943 DNAH12Q6ZR08 3092 aa14.15□□□□□ -0.14
SCFD1-201ENST00000311943 IFIT3O14879 490 aaKnown RBP14.15□□□□□ -0.14
SCFD1-201ENST00000311943 DTNBO60941 627 aa14.15□□□□□ -0.14
SCFD1-201ENST00000311943 EN2P19622 333 aaPredicted RBP14.15□□□□□ -0.14
SCFD1-201ENST00000311943 STAT3P40763 770 aa14.15□□□□□ -0.14
SCFD1-201ENST00000311943 STAT2P52630 851 aa14.15□□□□□ -0.14
SCFD1-201ENST00000311943 ZNF543Q08ER8 600 aa14.15□□□□□ -0.14
SCFD1-201ENST00000311943 CMTR1Q8N1G2 835 aaKnown RBP14.15□□□□□ -0.14
SCFD1-201ENST00000311943 UBAC1Q9BSL1 405 aa14.15□□□□□ -0.14
SCFD1-201ENST00000311943 UNC93B1Q9H1C4 597 aa14.15□□□□□ -0.14
SCFD1-201ENST00000311943 SLC38A10Q9HBR0 1119 aa14.15□□□□□ -0.14
SCFD1-201ENST00000311943 BIN2Q9UBW5 565 aaPredicted RBP14.15□□□□□ -0.14
SCFD1-201ENST00000311943 KIAA0100Q14667 2235 aaKnown RBP14.14□□□□□ -0.15
SCFD1-201ENST00000311943 SNHG28P0DPA3 235 aa14.14□□□□□ -0.15
SCFD1-201ENST00000311943 PTPREP23469 700 aa14.14□□□□□ -0.15
SCFD1-201ENST00000311943 ADORA2AP29274 412 aa14.14□□□□□ -0.15
SCFD1-201ENST00000311943 MUM1L1Q5H9M0 696 aa14.14□□□□□ -0.15
SCFD1-201ENST00000311943 IFIT1BQ5T764 474 aaKnown RBP14.14□□□□□ -0.15
SCFD1-201ENST00000311943 RALYLQ86SE5 291 aaKnown RBP14.14□□□□□ -0.15
SCFD1-201ENST00000311943 DGKHQ86XP1 1220 aa14.14□□□□□ -0.15
SCFD1-201ENST00000311943 CCDC144CPQ8IYA2 1237 aa14.14□□□□□ -0.15
SCFD1-201ENST00000311943 KAT14Q9H8E8 782 aa14.14□□□□□ -0.15
SCFD1-201ENST00000311943 VAT1LQ9HCJ6 419 aa14.14□□□□□ -0.15
SCFD1-201ENST00000311943 FEM1BQ9UK73 627 aa14.14□□□□□ -0.15
SCFD1-201ENST00000311943 PRC1O43663 620 aa14.14□□□□□ -0.15
SCFD1-201ENST00000311943 INHAP05111 366 aa14.14□□□□□ -0.15
SCFD1-201ENST00000311943 PCP11498 1178 aaKnown RBP14.14□□□□□ -0.15
SCFD1-201ENST00000311943 TRDNQ13061 729 aa14.14□□□□□ -0.15
SCFD1-201ENST00000311943 PRAMEF19Q5SWL8 479 aa14.14□□□□□ -0.15
SCFD1-201ENST00000311943 PIBF1Q8WXW3 757 aa14.14□□□□□ -0.15
SCFD1-201ENST00000311943 TTC14Q96N46 770 aa14.14□□□□□ -0.15
SCFD1-201ENST00000311943 LARP6Q9BRS8 491 aaKnown RBP14.14□□□□□ -0.15
SCFD1-201ENST00000311943 CNNM2Q9H8M5 875 aa14.14□□□□□ -0.15
SCFD1-201ENST00000311943 MAPK4P31152 587 aa14.13□□□□□ -0.15
SCFD1-201ENST00000311943 CYP2C19P33261 490 aa14.13□□□□□ -0.15
SCFD1-201ENST00000311943 TMEM67Q5HYA8 995 aa14.13□□□□□ -0.15
SCFD1-201ENST00000311943 ARMC5Q96C12 935 aa14.13□□□□□ -0.15
SCFD1-201ENST00000311943 NUDT12Q9BQG2 462 aa14.13□□□□□ -0.15
SCFD1-201ENST00000311943 LY9Q9HBG7 655 aa14.13□□□□□ -0.15
SCFD1-201ENST00000311943 SNX14Q9Y5W7 946 aa14.13□□□□□ -0.15
SCFD1-201ENST00000311943 HOXD10P28358 340 aa14.12□□□□□ -0.15
SCFD1-201ENST00000311943 GRB14Q14449 540 aa14.12□□□□□ -0.15
SCFD1-201ENST00000311943 RIOX2Q8IUF8 465 aa14.12□□□□□ -0.15
SCFD1-201ENST00000311943 ANKS1AQ92625 1134 aa14.12□□□□□ -0.15
SCFD1-201ENST00000311943 CWC22Q9HCG8 908 aaKnown RBP14.12□□□□□ -0.15
SCFD1-201ENST00000311943 BAZ2BQ9UIF8 2168 aaKnown RBP14.12□□□□□ -0.15
SCFD1-201ENST00000311943 ALAS1P13196 640 aa14.12□□□□□ -0.15
SCFD1-201ENST00000311943 PTGS1P23219 599 aa14.12□□□□□ -0.15
SCFD1-201ENST00000311943 CCND3P30281 292 aaPredicted RBP14.12□□□□□ -0.15
SCFD1-201ENST00000311943 HSPA4P34932 840 aa14.12□□□□□ -0.15
SCFD1-201ENST00000311943 MAP2K5Q13163 448 aa14.12□□□□□ -0.15
SCFD1-201ENST00000311943 ANO1Q5XXA6 986 aa14.12□□□□□ -0.15
SCFD1-201ENST00000311943 CASC1Q6TDU7 716 aa14.12□□□□□ -0.15
SCFD1-201ENST00000311943 DCAF4Q8WV16 495 aa14.12□□□□□ -0.15
SCFD1-201ENST00000311943 TBC1D5Q92609 795 aa14.12□□□□□ -0.15
SCFD1-201ENST00000311943 MAD2L2Q9UI95 211 aa14.12□□□□□ -0.15
SCFD1-201ENST00000311943 hCG_1642624A0A1W2PR95 340 aa14.11□□□□□ -0.15
SCFD1-201ENST00000311943 PPFIA3O75145 1194 aa14.11□□□□□ -0.15
SCFD1-201ENST00000311943 CCL5P13501 91 aa14.11□□□□□ -0.15
SCFD1-201ENST00000311943 CNTN2Q02246 1040 aa14.11□□□□□ -0.15
SCFD1-201ENST00000311943 SYDE2Q5VT97 1194 aa14.11□□□□□ -0.15
SCFD1-201ENST00000311943 NUP133Q8WUM0 1156 aa14.11□□□□□ -0.15
SCFD1-201ENST00000311943 TEX13BQ9BXU2 312 aa14.11□□□□□ -0.15
SCFD1-201ENST00000311943 USP26Q9BXU7 913 aa14.11□□□□□ -0.15
SCFD1-201ENST00000311943 BRPF3Q9ULD4 1205 aa14.11□□□□□ -0.15
SCFD1-201ENST00000311943 SYNPO2Q9UMS6 1093 aa14.11□□□□□ -0.15
SCFD1-201ENST00000311943 ASTN1O14525 1302 aa14.1□□□□□ -0.15
SCFD1-201ENST00000311943 ZNFX1Q9P2E3 1918 aaKnown RBP14.1□□□□□ -0.15
SCFD1-201ENST00000311943 NFIBO00712 420 aa14.1□□□□□ -0.15
SCFD1-201ENST00000311943 SH2B2O14492 632 aaPredicted RBP14.1□□□□□ -0.15
SCFD1-201ENST00000311943 CYTH3O43739 400 aa14.1□□□□□ -0.15
SCFD1-201ENST00000311943 PPP1R11O60927 126 aaPredicted RBP14.1□□□□□ -0.15
SCFD1-201ENST00000311943 ZBED4O75132 1171 aa14.1□□□□□ -0.15
SCFD1-201ENST00000311943 GNRH1P01148 92 aa14.1□□□□□ -0.15
SCFD1-201ENST00000311943 CCNA1P78396 465 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms