RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 PBX1P40424 430 aa15.19■□□□□ 0.02
NPAS4-201ENST00000311034 MAGEA9P43362 315 aa15.19■□□□□ 0.02
NPAS4-201ENST00000311034 USP14P54578 494 aa15.19■□□□□ 0.02
NPAS4-201ENST00000311034 IRX3P78415 501 aaPredicted RBP15.19■□□□□ 0.02
NPAS4-201ENST00000311034 FAM76AQ8TAV0 307 aa15.19■□□□□ 0.02
NPAS4-201ENST00000311034 LPIN2Q92539 896 aa15.19■□□□□ 0.02
NPAS4-201ENST00000311034 SHISA4Q96DD7 197 aa15.19■□□□□ 0.02
NPAS4-201ENST00000311034 RNF41Q9H4P4 317 aaPredicted RBP15.19■□□□□ 0.02
NPAS4-201ENST00000311034 SAMM50Q9Y512 469 aa15.19■□□□□ 0.02
NPAS4-201ENST00000311034 KIF13AQ9H1H9 1805 aa15.18■□□□□ 0.02
NPAS4-201ENST00000311034 PCDH11XQ9BZA7 1347 aa15.18■□□□□ 0.02
NPAS4-201ENST00000311034 PCDH11YQ9BZA8 1340 aa15.18■□□□□ 0.02
NPAS4-201ENST00000311034 RPN1P04843 607 aaKnown RBP15.18■□□□□ 0.02
NPAS4-201ENST00000311034 UBA7P41226 1012 aa15.18■□□□□ 0.02
NPAS4-201ENST00000311034 SPAG1Q07617 926 aa15.18■□□□□ 0.02
NPAS4-201ENST00000311034 SUSD4Q5VX71 490 aa15.18■□□□□ 0.02
NPAS4-201ENST00000311034 CADPS2Q86UW7 1296 aa15.18■□□□□ 0.02
NPAS4-201ENST00000311034 MKRN1Q9UHC7 482 aaKnown RBP15.18■□□□□ 0.02
NPAS4-201ENST00000311034 HPCAL4Q9UM19 191 aa15.18■□□□□ 0.02
NPAS4-201ENST00000311034 MYH8P13535 1937 aa15.18■□□□□ 0.02
NPAS4-201ENST00000311034 RIC1Q4ADV7 1423 aa15.18■□□□□ 0.02
NPAS4-201ENST00000311034 GOLGA6BA6NDN3 693 aa15.18■□□□□ 0.02
NPAS4-201ENST00000311034 TUBB2AQ13885 445 aa15.18■□□□□ 0.02
NPAS4-201ENST00000311034 DYMQ7RTS9 669 aa15.18■□□□□ 0.02
NPAS4-201ENST00000311034 SLC51AQ86UW1 340 aa15.18■□□□□ 0.02
NPAS4-201ENST00000311034 TICAM2Q86XR7 235 aa15.18■□□□□ 0.02
NPAS4-201ENST00000311034 DYNLL2Q96FJ2 89 aa15.18■□□□□ 0.02
NPAS4-201ENST00000311034 TUBB2BQ9BVA1 445 aa15.18■□□□□ 0.02
NPAS4-201ENST00000311034 REXO2Q9Y3B8 237 aaKnown RBP15.18■□□□□ 0.02
NPAS4-201ENST00000311034 JRKLQ9Y4A0 524 aa15.18■□□□□ 0.02
NPAS4-201ENST00000311034 KRT86O43790 486 aa15.17■□□□□ 0.02
NPAS4-201ENST00000311034 MTIF2P46199 727 aaKnown RBP15.17■□□□□ 0.02
NPAS4-201ENST00000311034 LETM2Q2VYF4 491 aa15.17■□□□□ 0.02
NPAS4-201ENST00000311034 TMTC2Q8N394 836 aa15.17■□□□□ 0.02
NPAS4-201ENST00000311034 FERMT2Q96AC1 680 aa15.17■□□□□ 0.02
NPAS4-201ENST00000311034 SELENOOQ9BVL4 669 aa15.17■□□□□ 0.02
NPAS4-201ENST00000311034 AGPAT5Q9NUQ2 364 aa15.17■□□□□ 0.02
NPAS4-201ENST00000311034 CSF1RP07333 972 aa15.17■□□□□ 0.02
NPAS4-201ENST00000311034 EZH2Q15910 746 aaKnown RBP15.17■□□□□ 0.02
NPAS4-201ENST00000311034 CCDC181Q5TID7 509 aa15.17■□□□□ 0.02
NPAS4-201ENST00000311034 KRT26Q7Z3Y9 468 aa15.17■□□□□ 0.02
NPAS4-201ENST00000311034 LACRTQ9GZZ8 138 aa15.17■□□□□ 0.02
NPAS4-201ENST00000311034 USP54Q70EL1 1684 aa15.17■□□□□ 0.02
NPAS4-201ENST00000311034 PLEKHG2Q9H7P9 1386 aa15.17■□□□□ 0.02
NPAS4-201ENST00000311034 CCDC194A0A1B0GVG4 234 aa15.17■□□□□ 0.02
NPAS4-201ENST00000311034 SYF2O95926 243 aaKnown RBP15.17■□□□□ 0.02
NPAS4-201ENST00000311034 SPATA20Q8TB22 786 aa15.17■□□□□ 0.02
NPAS4-201ENST00000311034 PPM1EQ8WY54 764 aa15.17■□□□□ 0.02
NPAS4-201ENST00000311034 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.17■□□□□ 0.02
NPAS4-201ENST00000311034 ZEB2O60315 1214 aa15.16■□□□□ 0.02
NPAS4-201ENST00000311034 PMS1P54277 932 aaKnown RBP15.16■□□□□ 0.02
NPAS4-201ENST00000311034 CAVIN4Q5BKX8 364 aa15.16■□□□□ 0.02
NPAS4-201ENST00000311034 KCTD16Q68DU8 428 aa15.16■□□□□ 0.02
NPAS4-201ENST00000311034 DZIP1Q86YF9 867 aaKnown RBP15.16■□□□□ 0.02
NPAS4-201ENST00000311034 ENAHQ8N8S7 591 aaPredicted RBP15.16■□□□□ 0.02
NPAS4-201ENST00000311034 SLC44A5Q8NCS7 719 aa15.16■□□□□ 0.02
NPAS4-201ENST00000311034 HAUS4Q9H6D7 363 aa15.16■□□□□ 0.02
NPAS4-201ENST00000311034 EHD2Q9NZN4 543 aa15.16■□□□□ 0.02
NPAS4-201ENST00000311034 RWDD2AQ9UIY3 292 aa15.16■□□□□ 0.02
NPAS4-201ENST00000311034 FBXO3Q9UK99 471 aa15.16■□□□□ 0.02
NPAS4-201ENST00000311034 SLIT3O75094 1523 aa15.16■□□□□ 0.02
NPAS4-201ENST00000311034 PPFIA4O75335 1185 aa15.16■□□□□ 0.02
NPAS4-201ENST00000311034 ATP1A2P50993 1020 aa15.16■□□□□ 0.02
NPAS4-201ENST00000311034 TBC1D8BQ0IIM8 1120 aa15.16■□□□□ 0.02
NPAS4-201ENST00000311034 PICALMQ13492 652 aa15.16■□□□□ 0.02
NPAS4-201ENST00000311034 STAG1Q8WVM7 1258 aa15.16■□□□□ 0.02
NPAS4-201ENST00000311034 RRP36Q96EU6 259 aaKnown RBP15.16■□□□□ 0.02
NPAS4-201ENST00000311034 RNF26Q9BY78 433 aaPredicted RBP15.16■□□□□ 0.02
NPAS4-201ENST00000311034 KAT14Q9H8E8 782 aa15.16■□□□□ 0.02
NPAS4-201ENST00000311034 MMRN2Q9H8L6 949 aa15.16■□□□□ 0.02
NPAS4-201ENST00000311034 HERVK_113P62684 666 aa15.15■□□□□ 0.02
NPAS4-201ENST00000311034 ICE2Q659A1 982 aa15.15■□□□□ 0.02
NPAS4-201ENST00000311034 BCAS4Q8TDM0 211 aa15.15■□□□□ 0.02
NPAS4-201ENST00000311034 ZSCAN10Q96SZ4 725 aaPredicted RBP15.15■□□□□ 0.02
NPAS4-201ENST00000311034 EFCC1Q9HA90 598 aa15.15■□□□□ 0.02
NPAS4-201ENST00000311034 LIMA1Q9UHB6 759 aaKnown RBP15.15■□□□□ 0.02
NPAS4-201ENST00000311034 SIPA1L3O60292 1781 aaPredicted RBP15.15■□□□□ 0.02
NPAS4-201ENST00000311034 C4AP0C0L4 1744 aa15.15■□□□□ 0.02
NPAS4-201ENST00000311034 C4BP0C0L5 1744 aa15.15■□□□□ 0.02
NPAS4-201ENST00000311034 ABCC12Q96J65 1359 aa15.15■□□□□ 0.02
NPAS4-201ENST00000311034 GTPBP6O43824 516 aaPredicted RBP15.15■□□□□ 0.02
NPAS4-201ENST00000311034 CYLC1P35663 651 aaPredicted RBP15.15■□□□□ 0.02
NPAS4-201ENST00000311034 NOP2P46087 812 aaKnown RBP15.15■□□□□ 0.02
NPAS4-201ENST00000311034 GNGT1P63211 74 aa15.15■□□□□ 0.02
NPAS4-201ENST00000311034 AMPD2Q01433 879 aa15.15■□□□□ 0.02
NPAS4-201ENST00000311034 CHRNDQ07001 517 aa15.15■□□□□ 0.02
NPAS4-201ENST00000311034 CKAP4Q07065 602 aaKnown RBP15.15■□□□□ 0.02
NPAS4-201ENST00000311034 PKN1Q16512 942 aa15.15■□□□□ 0.02
NPAS4-201ENST00000311034 GIGYF2Q6Y7W6 1299 aaKnown RBP15.15■□□□□ 0.02
NPAS4-201ENST00000311034 TRAPPC11Q7Z392 1133 aa15.15■□□□□ 0.02
NPAS4-201ENST00000311034 ELOA2Q8IYF1 753 aaPredicted RBP15.15■□□□□ 0.02
NPAS4-201ENST00000311034 MB21D1Q8N884 522 aa15.15■□□□□ 0.02
NPAS4-201ENST00000311034 COG1Q8WTW3 980 aa15.15■□□□□ 0.02
NPAS4-201ENST00000311034 H0YHG0 523 aa15.15■□□□□ 0.02
NPAS4-201ENST00000311034 PDE2AO00408 941 aaPredicted RBP15.15■□□□□ 0.02
NPAS4-201ENST00000311034 ADAMTS3O15072 1205 aa15.15■□□□□ 0.02
NPAS4-201ENST00000311034 KIF5AQ12840 1032 aa15.15■□□□□ 0.02
NPAS4-201ENST00000311034 TRIM14Q14142 442 aa15.15■□□□□ 0.02
NPAS4-201ENST00000311034 SPA17Q15506 151 aa15.15■□□□□ 0.02
NPAS4-201ENST00000311034 INF2Q27J81 1249 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms