RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 TSPY8P0CW00 308 aa24.41■■□□□ 1.5
RER1-201ENST00000306256 ADCYAP1R1P41586 468 aa24.41■■□□□ 1.5
RER1-201ENST00000306256 PPARAQ07869 468 aa24.41■■□□□ 1.5
RER1-201ENST00000306256 LRIT3Q3SXY7 679 aa24.41■■□□□ 1.5
RER1-201ENST00000306256 SLC39A5Q6ZMH5 540 aa24.41■■□□□ 1.5
RER1-201ENST00000306256 NEDD1Q8NHV4 660 aa24.41■■□□□ 1.5
RER1-201ENST00000306256 MKL1Q969V6 931 aa24.41■■□□□ 1.5
RER1-201ENST00000306256 FERMT2Q96AC1 680 aa24.41■■□□□ 1.5
RER1-201ENST00000306256 DIS3Q9Y2L1 958 aaKnown RBP24.41■■□□□ 1.5
RER1-201ENST00000306256 FOXP2O15409 715 aa24.4■■□□□ 1.5
RER1-201ENST00000306256 PDE4BQ07343 736 aa24.4■■□□□ 1.5
RER1-201ENST00000306256 ANKRD45Q5TZF3 282 aa24.4■■□□□ 1.5
RER1-201ENST00000306256 LENG1Q96BZ8 264 aaPredicted RBP24.4■■□□□ 1.5
RER1-201ENST00000306256 CHMP4CQ96CF2 233 aa24.4■■□□□ 1.5
RER1-201ENST00000306256 LBHD1Q9BQE6 289 aaPredicted RBP24.4■■□□□ 1.5
RER1-201ENST00000306256 RAVER2Q9HCJ3 691 aaKnown RBP24.4■■□□□ 1.5
RER1-201ENST00000306256 XPNPEP3Q9NQH7 507 aa24.4■■□□□ 1.5
RER1-201ENST00000306256 NRBP1Q9UHY1 535 aa24.4■■□□□ 1.5
RER1-201ENST00000306256 ZBED4O75132 1171 aa24.39■■□□□ 1.49
RER1-201ENST00000306256 SLC3A2P08195 630 aaKnown RBP24.39■■□□□ 1.49
RER1-201ENST00000306256 RARBP10826 455 aa24.39■■□□□ 1.49
RER1-201ENST00000306256 TFAP4Q01664 338 aa24.39■■□□□ 1.49
RER1-201ENST00000306256 TRIM60Q495X7 471 aa24.39■■□□□ 1.49
RER1-201ENST00000306256 SLFN13Q68D06 897 aa24.39■■□□□ 1.49
RER1-201ENST00000306256 ZBTB47Q9UFB7 747 aaPredicted RBP24.39■■□□□ 1.49
RER1-201ENST00000306256 ISY1Q9ULR0 285 aaKnown RBP24.39■■□□□ 1.49
RER1-201ENST00000306256 CTDP1Q9Y5B0 961 aaPredicted RBP24.39■■□□□ 1.49
RER1-201ENST00000306256 PGK1P00558 417 aa24.38■■□□□ 1.49
RER1-201ENST00000306256 ZNF865P0CJ78 1059 aaPredicted RBP24.38■■□□□ 1.49
RER1-201ENST00000306256 Q7L0L9 218 aa24.38■■□□□ 1.49
RER1-201ENST00000306256 GMCL1P1Q8NEA9 526 aa24.38■■□□□ 1.49
RER1-201ENST00000306256 DDX11Q96FC9 970 aa24.38■■□□□ 1.49
RER1-201ENST00000306256 SLC38A10Q9HBR0 1119 aa24.38■■□□□ 1.49
RER1-201ENST00000306256 PRKAG2Q9UGJ0 569 aa24.38■■□□□ 1.49
RER1-201ENST00000306256 FEM1BQ9UK73 627 aa24.38■■□□□ 1.49
RER1-201ENST00000306256 ATP2A1O14983 1001 aa24.37■■□□□ 1.49
RER1-201ENST00000306256 CTDSPL2Q05D32 466 aa24.37■■□□□ 1.49
RER1-201ENST00000306256 SNX17Q15036 470 aa24.37■■□□□ 1.49
RER1-201ENST00000306256 INCENPQ9NQS7 918 aa24.37■■□□□ 1.49
RER1-201ENST00000306256 PRDM5Q9NQX1 630 aaPredicted RBP24.37■■□□□ 1.49
RER1-201ENST00000306256 SYNPO2Q9UMS6 1093 aa24.37■■□□□ 1.49
RER1-201ENST00000306256 CNPY2Q9Y2B0 182 aa24.37■■□□□ 1.49
RER1-201ENST00000306256 DNAJC25-GNG10A0A024R161 153 aa24.36■■□□□ 1.49
RER1-201ENST00000306256 BMP3P12645 472 aa24.36■■□□□ 1.49
RER1-201ENST00000306256 PHF24Q9UPV7 400 aa24.36■■□□□ 1.49
RER1-201ENST00000306256 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.36■■□□□ 1.495e-6■■■□□ 15.8
RER1-201ENST00000306256 SNAI1O95863 264 aaPredicted RBP24.35■■□□□ 1.49
RER1-201ENST00000306256 AKR1A1P14550 325 aa24.35■■□□□ 1.49
RER1-201ENST00000306256 VPS53Q5VIR6 699 aa24.35■■□□□ 1.49
RER1-201ENST00000306256 GPR153Q6NV75 609 aa24.35■■□□□ 1.49
RER1-201ENST00000306256 DEFB123Q8N688 67 aa24.35■■□□□ 1.49
RER1-201ENST00000306256 TACC3Q9Y6A5 838 aa24.35■■□□□ 1.49
RER1-201ENST00000306256 TMEM232C9JQI7 657 aa24.34■■□□□ 1.49
RER1-201ENST00000306256 NMT2O60551 498 aa24.34■■□□□ 1.49
RER1-201ENST00000306256 PDE1AP54750 535 aa24.34■■□□□ 1.49
RER1-201ENST00000306256 RNF180Q86T96 592 aa24.34■■□□□ 1.49
RER1-201ENST00000306256 EVI5LQ96CN4 794 aa24.34■■□□□ 1.49
RER1-201ENST00000306256 PDLIM7Q9NR12 457 aa24.34■■□□□ 1.49
RER1-201ENST00000306256 HOMER2Q9NSB8 354 aa24.34■■□□□ 1.49
RER1-201ENST00000306256 ZHX1Q9UKY1 873 aaPredicted RBP24.34■■□□□ 1.49
RER1-201ENST00000306256 SYNGAP1Q96PV0 1343 aa24.34■■□□□ 1.49
RER1-201ENST00000306256 HDAC1Q13547 482 aaPredicted RBP24.33■■□□□ 1.49
RER1-201ENST00000306256 RASGRP2Q7LDG7 609 aa24.33■■□□□ 1.49
RER1-201ENST00000306256 SH3RF1Q7Z6J0 888 aa24.33■■□□□ 1.49
RER1-201ENST00000306256 MSL3Q8N5Y2 521 aaKnown RBP24.33■■□□□ 1.49
RER1-201ENST00000306256 FGD4Q96M96 766 aa24.33■■□□□ 1.49
RER1-201ENST00000306256 TSPY2A6NKD2 308 aa24.32■■□□□ 1.48
RER1-201ENST00000306256 ADAMTS4O75173 837 aa24.32■■□□□ 1.48
RER1-201ENST00000306256 MCCP23508 829 aa24.32■■□□□ 1.48
RER1-201ENST00000306256 SLC1A4P43007 532 aa24.32■■□□□ 1.48
RER1-201ENST00000306256 OAZ1P54368 228 aa24.32■■□□□ 1.48
RER1-201ENST00000306256 TLE2Q04725 743 aa24.32■■□□□ 1.48
RER1-201ENST00000306256 IKQ13123 557 aaPredicted RBP24.32■■□□□ 1.48
RER1-201ENST00000306256 MAMDC4Q6UXC1 1216 aa24.32■■□□□ 1.48
RER1-201ENST00000306256 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.32■■□□□ 1.48
RER1-201ENST00000306256 ANKRD35Q8N283 1001 aa24.32■■□□□ 1.48
RER1-201ENST00000306256 CHST13Q8NET6 341 aa24.32■■□□□ 1.48
RER1-201ENST00000306256 IL17RBQ9NRM6 502 aa24.32■■□□□ 1.48
RER1-201ENST00000306256 STX8Q9UNK0 236 aa24.32■■□□□ 1.48
RER1-201ENST00000306256 STAT2P52630 851 aa24.31■■□□□ 1.48
RER1-201ENST00000306256 GMCL1Q96IK5 515 aa24.31■■□□□ 1.48
RER1-201ENST00000306256 FAM227BQ96M60 508 aa24.31■■□□□ 1.48
RER1-201ENST00000306256 FBXO40Q9UH90 709 aa24.31■■□□□ 1.48
RER1-201ENST00000306256 MTMR7Q9Y216 660 aa24.31■■□□□ 1.48
RER1-201ENST00000306256 LCTP09848 1927 aa24.31■■□□□ 1.48
RER1-201ENST00000306256 SYNRGQ9UMZ2 1314 aa24.31■■□□□ 1.48
RER1-201ENST00000306256 A0A0D9SFI3 127 aa24.3■■□□□ 1.48
RER1-201ENST00000306256 A0A1W2PQ45 241 aaPredicted RBP24.3■■□□□ 1.48
RER1-201ENST00000306256 A0A1W2PQY0 241 aa24.3■■□□□ 1.48
RER1-201ENST00000306256 TRIM43BA6NCK2 446 aa24.3■■□□□ 1.48
RER1-201ENST00000306256 RANBP6O60518 1105 aaKnown RBP24.3■■□□□ 1.48
RER1-201ENST00000306256 C1orf53Q5VUE5 145 aa24.3■■□□□ 1.48
RER1-201ENST00000306256 KCTD1Q719H9 257 aa24.3■■□□□ 1.48
RER1-201ENST00000306256 ZNF467Q7Z7K2 595 aaPredicted RBP24.3■■□□□ 1.48
RER1-201ENST00000306256 BADQ92934 168 aa24.3■■□□□ 1.48
RER1-201ENST00000306256 TRIM43Q96BQ3 446 aaPredicted RBP24.3■■□□□ 1.48
RER1-201ENST00000306256 AGBL1Q96MI9 1066 aa24.3■■□□□ 1.48
RER1-201ENST00000306256 YTHDC1Q96MU7 727 aaKnown RBP24.3■■□□□ 1.48
RER1-201ENST00000306256 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.3■■□□□ 1.48
RER1-201ENST00000306256 FAM184BQ9ULE4 1060 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms