RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 CERS5Q8N5B7 392 aa15.31■□□□□ 0.04
TTC39B-201ENST00000297615 FANCGO15287 622 aa15.3■□□□□ 0.04
TTC39B-201ENST00000297615 POLR3GO15318 223 aaPredicted RBP15.3■□□□□ 0.04
TTC39B-201ENST00000297615 FNBP4Q8N3X1 1017 aaPredicted RBP15.3■□□□□ 0.04
TTC39B-201ENST00000297615 PCMTD1Q96MG8 357 aaPredicted RBP15.3■□□□□ 0.04
TTC39B-201ENST00000297615 MAD2L2Q9UI95 211 aa15.3■□□□□ 0.04
TTC39B-201ENST00000297615 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.3■□□□□ 0.04
TTC39B-201ENST00000297615 COL14A1Q05707 1796 aaKnown RBP15.3■□□□□ 0.04
TTC39B-201ENST00000297615 MYH7P12883 1935 aa15.3■□□□□ 0.04
TTC39B-201ENST00000297615 ZNF397Q8NF99 534 aaPredicted RBP15.3■□□□□ 0.04
TTC39B-201ENST00000297615 CEP131Q9UPN4 1083 aa15.3■□□□□ 0.04
TTC39B-201ENST00000297615 ABCC6O95255 1503 aa15.3■□□□□ 0.04
TTC39B-201ENST00000297615 PHLPP1O60346 1717 aa15.3■□□□□ 0.04
TTC39B-201ENST00000297615 ATRNO75882 1429 aa15.3■□□□□ 0.04
TTC39B-201ENST00000297615 KIF5BP33176 963 aa15.3■□□□□ 0.04
TTC39B-201ENST00000297615 KRT27Q7Z3Y8 459 aa15.3■□□□□ 0.04
TTC39B-201ENST00000297615 RTFDC1Q9BY42 306 aaPredicted RBP15.3■□□□□ 0.04
TTC39B-201ENST00000297615 N4BP3O15049 544 aa15.29■□□□□ 0.04
TTC39B-201ENST00000297615 SPECC1LQ69YQ0 1117 aa15.29■□□□□ 0.04
TTC39B-201ENST00000297615 PPFIBP1Q86W92 1011 aa15.29■□□□□ 0.04
TTC39B-201ENST00000297615 COL23A1Q86Y22 540 aaPredicted RBP15.29■□□□□ 0.04
TTC39B-201ENST00000297615 CCDC12Q8WUD4 166 aaPredicted RBP15.29■□□□□ 0.04
TTC39B-201ENST00000297615 RBM17Q96I25 401 aaKnown RBP15.29■□□□□ 0.04
TTC39B-201ENST00000297615 PUF60Q9UHX1 559 aaKnown RBP15.29■□□□□ 0.04
TTC39B-201ENST00000297615 NHSL1Q5SYE7 1610 aa15.29■□□□□ 0.04
TTC39B-201ENST00000297615 FLT1P17948 1338 aa15.29■□□□□ 0.04
TTC39B-201ENST00000297615 LRRC41Q15345 812 aa15.29■□□□□ 0.04
TTC39B-201ENST00000297615 PFKFB3Q16875 520 aaPredicted RBP15.29■□□□□ 0.04
TTC39B-201ENST00000297615 USH1GQ495M9 461 aa15.29■□□□□ 0.04
TTC39B-201ENST00000297615 TICAM2Q86XR7 235 aa15.29■□□□□ 0.04
TTC39B-201ENST00000297615 ANAPC4Q9UJX5 808 aa15.29■□□□□ 0.04
TTC39B-201ENST00000297615 DAGLAQ9Y4D2 1042 aa15.29■□□□□ 0.04
TTC39B-201ENST00000297615 CICQ96RK0 1608 aaPredicted RBP15.28■□□□□ 0.04
TTC39B-201ENST00000297615 RNF225M0QZC1 329 aaPredicted RBP15.28■□□□□ 0.04
TTC39B-201ENST00000297615 PARP1P09874 1014 aaKnown RBP15.28■□□□□ 0.04
TTC39B-201ENST00000297615 PMS1P54277 932 aaKnown RBP15.28■□□□□ 0.04
TTC39B-201ENST00000297615 IGSF22Q8N9C0 903 aa15.28■□□□□ 0.04
TTC39B-201ENST00000297615 OGFRQ9NZT2 677 aa15.28■□□□□ 0.04
TTC39B-201ENST00000297615 SYNRGQ9UMZ2 1314 aa15.28■□□□□ 0.04
TTC39B-201ENST00000297615 PAPPAQ13219 1627 aa15.28■□□□□ 0.04
TTC39B-201ENST00000297615 POTEMA6NI47 508 aa15.28■□□□□ 0.04
TTC39B-201ENST00000297615 CASQ1P31415 396 aa15.28■□□□□ 0.04
TTC39B-201ENST00000297615 RBL2Q08999 1139 aa15.28■□□□□ 0.04
TTC39B-201ENST00000297615 DTHD1Q6ZMT9 781 aa15.28■□□□□ 0.04
TTC39B-201ENST00000297615 CCDC34Q96HJ3 373 aa15.28■□□□□ 0.04
TTC39B-201ENST00000297615 RBM28Q9NW13 759 aaKnown RBP15.28■□□□□ 0.04
TTC39B-201ENST00000297615 CLRN2A0PK11 232 aa15.28■□□□□ 0.04
TTC39B-201ENST00000297615 PPEF1O14829 653 aaPredicted RBP15.28■□□□□ 0.04
TTC39B-201ENST00000297615 SOGA3Q5TF21 947 aa15.28■□□□□ 0.04
TTC39B-201ENST00000297615 LRRC15Q8TF66 581 aa15.28■□□□□ 0.04
TTC39B-201ENST00000297615 PRDM4Q9UKN5 801 aa15.28■□□□□ 0.04
TTC39B-201ENST00000297615 PCDHA6Q9UN73 950 aa15.28■□□□□ 0.04
TTC39B-201ENST00000297615 PCDHA8Q9Y5H6 950 aa15.28■□□□□ 0.04
TTC39B-201ENST00000297615 STK36Q9NRP7 1315 aa15.27■□□□□ 0.04
TTC39B-201ENST00000297615 USP17L15C9J2P7 530 aa15.27■□□□□ 0.04
TTC39B-201ENST00000297615 USP17L13C9JLJ4 530 aa15.27■□□□□ 0.04
TTC39B-201ENST00000297615 USP17L11C9JVI0 530 aa15.27■□□□□ 0.04
TTC39B-201ENST00000297615 USP17L18D6R9N7 530 aa15.27■□□□□ 0.04
TTC39B-201ENST00000297615 USP17L22D6RA61 530 aa15.27■□□□□ 0.04
TTC39B-201ENST00000297615 USP17L17D6RBQ6 530 aa15.27■□□□□ 0.04
TTC39B-201ENST00000297615 USP17L19D6RCP7 530 aa15.27■□□□□ 0.04
TTC39B-201ENST00000297615 USP17L20D6RJB6 530 aa15.27■□□□□ 0.04
TTC39B-201ENST00000297615 TDP2O95551 362 aa15.27■□□□□ 0.04
TTC39B-201ENST00000297615 FCER1AP12319 257 aa15.27■□□□□ 0.04
TTC39B-201ENST00000297615 CASP14P31944 242 aa15.27■□□□□ 0.04
TTC39B-201ENST00000297615 UBXN2AP68543 259 aa15.27■□□□□ 0.04
TTC39B-201ENST00000297615 USP17L24Q0WX57 530 aa15.27■□□□□ 0.04
TTC39B-201ENST00000297615 RC3H1Q5TC82 1133 aaKnown RBP15.27■□□□□ 0.04
TTC39B-201ENST00000297615 USP17L6PQ6QN14 398 aa15.27■□□□□ 0.04
TTC39B-201ENST00000297615 REXO1L1PQ8IX06 675 aa15.27■□□□□ 0.04
TTC39B-201ENST00000297615 TC2NQ8N9U0 490 aa15.27■□□□□ 0.04
TTC39B-201ENST00000297615 MLKLQ8NB16 471 aa15.27■□□□□ 0.04
TTC39B-201ENST00000297615 TBCKQ8TEA7 893 aa15.27■□□□□ 0.04
TTC39B-201ENST00000297615 PSDA5PKW4 1024 aaPredicted RBP15.27■□□□□ 0.03
TTC39B-201ENST00000297615 MORC3Q14149 939 aa15.27■□□□□ 0.03
TTC39B-201ENST00000297615 SLC39A2Q9NP94 309 aa15.27■□□□□ 0.03
TTC39B-201ENST00000297615 SEC63Q9UGP8 760 aaKnown RBP15.27■□□□□ 0.03
TTC39B-201ENST00000297615 DDX41Q9UJV9 622 aaKnown RBP15.27■□□□□ 0.03
TTC39B-201ENST00000297615 LEMD3Q9Y2U8 911 aa15.27■□□□□ 0.03
TTC39B-201ENST00000297615 LDHCP07864 332 aa15.26■□□□□ 0.03
TTC39B-201ENST00000297615 SLFN14P0C7P3 912 aa15.26■□□□□ 0.03
TTC39B-201ENST00000297615 KLK7P49862 253 aa15.26■□□□□ 0.03
TTC39B-201ENST00000297615 CLCN6P51797 869 aa15.26■□□□□ 0.03
TTC39B-201ENST00000297615 POTEDQ86YR6 584 aa15.26■□□□□ 0.03
TTC39B-201ENST00000297615 MRPL44Q9H9J2 332 aaKnown RBP15.26■□□□□ 0.03
TTC39B-201ENST00000297615 ZNF446Q9NWS9 450 aa15.26■□□□□ 0.03
TTC39B-201ENST00000297615 ZSCAN12O43309 604 aa15.26■□□□□ 0.03
TTC39B-201ENST00000297615 CALM1P0DP23 149 aa15.26■□□□□ 0.03
TTC39B-201ENST00000297615 CALM2P0DP24 149 aa15.26■□□□□ 0.03
TTC39B-201ENST00000297615 CALM3P0DP25 149 aa15.26■□□□□ 0.03
TTC39B-201ENST00000297615 PRCPP42785 496 aa15.26■□□□□ 0.03
TTC39B-201ENST00000297615 DMTNQ08495 405 aa15.26■□□□□ 0.03
TTC39B-201ENST00000297615 TRIM65Q6PJ69 517 aa15.26■□□□□ 0.03
TTC39B-201ENST00000297615 IQUBQ8NA54 791 aa15.26■□□□□ 0.03
TTC39B-201ENST00000297615 ACRBPQ8NEB7 543 aa15.26■□□□□ 0.03
TTC39B-201ENST00000297615 NELFBQ8WX92 580 aa15.26■□□□□ 0.03
TTC39B-201ENST00000297615 DACH1Q9UI36 760 aa15.26■□□□□ 0.03
TTC39B-201ENST00000297615 TRPC5Q9UL62 973 aaPredicted RBP15.26■□□□□ 0.03
TTC39B-201ENST00000297615 KIF2AO00139 706 aaPredicted RBP15.25■□□□□ 0.03
TTC39B-201ENST00000297615 GLIS3Q8NEA6 775 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms