RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 AMOTL1Q8IY63 956 aa13.36□□□□□ -0.27
RHO-201ENST00000296271 ELOA2Q8IYF1 753 aaPredicted RBP13.36□□□□□ -0.27
RHO-201ENST00000296271 SYNRGQ9UMZ2 1314 aa13.36□□□□□ -0.27
RHO-201ENST00000296271 TRIM49BA6NDI0 452 aa13.36□□□□□ -0.27
RHO-201ENST00000296271 TBX2Q13207 712 aaPredicted RBP13.36□□□□□ -0.27
RHO-201ENST00000296271 KANK3Q6NY19 840 aa13.36□□□□□ -0.27
RHO-201ENST00000296271 KRT27Q7Z3Y8 459 aa13.36□□□□□ -0.27
RHO-201ENST00000296271 COL23A1Q86Y22 540 aaPredicted RBP13.36□□□□□ -0.27
RHO-201ENST00000296271 COA7Q96BR5 231 aa13.36□□□□□ -0.27
RHO-201ENST00000296271 BARHL2Q9NY43 387 aa13.36□□□□□ -0.27
RHO-201ENST00000296271 BIN2Q9UBW5 565 aaPredicted RBP13.36□□□□□ -0.27
RHO-201ENST00000296271 MYH1P12882 1939 aa13.36□□□□□ -0.27
RHO-201ENST00000296271 SPDYE4A6NLX3 237 aa13.35□□□□□ -0.27
RHO-201ENST00000296271 CBFA2T2O43439 604 aa13.35□□□□□ -0.27
RHO-201ENST00000296271 BBOX1O75936 387 aa13.35□□□□□ -0.27
RHO-201ENST00000296271 NAPAP54920 295 aa13.35□□□□□ -0.27
RHO-201ENST00000296271 NR1I3Q14994 352 aa13.35□□□□□ -0.27
RHO-201ENST00000296271 LETM2Q2VYF4 491 aa13.35□□□□□ -0.27
RHO-201ENST00000296271 JAKMIP3Q5VZ66 844 aa13.35□□□□□ -0.27
RHO-201ENST00000296271 RRAGBQ5VZM2 374 aa13.35□□□□□ -0.27
RHO-201ENST00000296271 BRWD3Q6RI45 1802 aa13.35□□□□□ -0.27
RHO-201ENST00000296271 RNF225M0QZC1 329 aaPredicted RBP13.35□□□□□ -0.27
RHO-201ENST00000296271 HOXA10P31260 410 aaPredicted RBP13.35□□□□□ -0.27
RHO-201ENST00000296271 NFIAQ12857 509 aa13.35□□□□□ -0.27
RHO-201ENST00000296271 PPP4R3BQ5MIZ7 849 aa13.35□□□□□ -0.27
RHO-201ENST00000296271 DPP8Q6V1X1 898 aaPredicted RBP13.35□□□□□ -0.27
RHO-201ENST00000296271 NEDD1Q8NHV4 660 aa13.35□□□□□ -0.27
RHO-201ENST00000296271 GJA10Q969M2 543 aa13.35□□□□□ -0.27
RHO-201ENST00000296271 GPCPD1Q9NPB8 672 aa13.35□□□□□ -0.27
RHO-201ENST00000296271 TTF2Q9UNY4 1162 aaKnown RBP13.35□□□□□ -0.27
RHO-201ENST00000296271 SMCO2A6NFE2 343 aa13.34□□□□□ -0.27
RHO-201ENST00000296271 PARP1P09874 1014 aaKnown RBP13.34□□□□□ -0.27
RHO-201ENST00000296271 PMS1P54277 932 aaKnown RBP13.34□□□□□ -0.27
RHO-201ENST00000296271 DHX8Q14562 1220 aaKnown RBP13.34□□□□□ -0.27
RHO-201ENST00000296271 REXO1L1PQ8IX06 675 aa13.34□□□□□ -0.27
RHO-201ENST00000296271 TRIML1Q8N9V2 468 aa13.34□□□□□ -0.27
RHO-201ENST00000296271 IQUBQ8NA54 791 aa13.34□□□□□ -0.27
RHO-201ENST00000296271 ANKRD7Q92527 254 aa13.34□□□□□ -0.27
RHO-201ENST00000296271 DBNDD1Q9H9R9 158 aa13.34□□□□□ -0.27
RHO-201ENST00000296271 TCP11L1Q9NUJ3 509 aa13.34□□□□□ -0.27
RHO-201ENST00000296271 PODXL2Q9NZ53 605 aa13.34□□□□□ -0.27
RHO-201ENST00000296271 CALML3P27482 149 aa13.34□□□□□ -0.27
RHO-201ENST00000296271 SPECC1LQ69YQ0 1117 aa13.34□□□□□ -0.27
RHO-201ENST00000296271 TTBK2Q6IQ55 1244 aa13.34□□□□□ -0.27
RHO-201ENST00000296271 RASSF8Q8NHQ8 419 aa13.34□□□□□ -0.27
RHO-201ENST00000296271 HPS3Q969F9 1004 aa13.34□□□□□ -0.27
RHO-201ENST00000296271 IRX2Q9BZI1 471 aaPredicted RBP13.34□□□□□ -0.27
RHO-201ENST00000296271 DNAI1Q9UI46 699 aa13.34□□□□□ -0.27
RHO-201ENST00000296271 PAXBP1Q9Y5B6 917 aa13.34□□□□□ -0.27
RHO-201ENST00000296271 SRCAPQ6ZRS2 3230 aa13.34□□□□□ -0.27
RHO-201ENST00000296271 GAKO14976 1311 aa13.34□□□□□ -0.27
RHO-201ENST00000296271 NKRFO15226 690 aaKnown RBP eCLIP13.33□□□□□ -0.27
RHO-201ENST00000296271 CCNT1O60563 726 aaKnown RBP13.33□□□□□ -0.27
RHO-201ENST00000296271 SLC16A2P36021 539 aa13.33□□□□□ -0.27
RHO-201ENST00000296271 STAT6P42226 847 aa13.33□□□□□ -0.27
RHO-201ENST00000296271 ATP2B2Q01814 1243 aa13.33□□□□□ -0.27
RHO-201ENST00000296271 SPATA1Q5VX52 437 aa13.33□□□□□ -0.27
RHO-201ENST00000296271 TRIM65Q6PJ69 517 aa13.33□□□□□ -0.27
RHO-201ENST00000296271 GSDMAQ96QA5 445 aa13.33□□□□□ -0.27
RHO-201ENST00000296271 VPS16Q9H269 839 aa13.33□□□□□ -0.27
RHO-201ENST00000296271 ANKRD31Q8N7Z5 1873 aa13.33□□□□□ -0.28
RHO-201ENST00000296271 A0A1B0GTH6 734 aa13.33□□□□□ -0.28
RHO-201ENST00000296271 SOWAHDA6NJG2 315 aa13.33□□□□□ -0.28
RHO-201ENST00000296271 ERCC5P28715 1186 aaPredicted RBP13.33□□□□□ -0.28
RHO-201ENST00000296271 PRCPP42785 496 aa13.33□□□□□ -0.28
RHO-201ENST00000296271 RBL2Q08999 1139 aa13.33□□□□□ -0.28
RHO-201ENST00000296271 PDCL2Q8N4E4 241 aa13.33□□□□□ -0.28
RHO-201ENST00000296271 KIF18AQ8NI77 898 aa13.33□□□□□ -0.28
RHO-201ENST00000296271 CRAMP1Q96RY5 1269 aa13.33□□□□□ -0.28
RHO-201ENST00000296271 EDIL3O43854 480 aa13.32□□□□□ -0.28
RHO-201ENST00000296271 BMP15O95972 392 aa13.32□□□□□ -0.28
RHO-201ENST00000296271 RPN1P04843 607 aaKnown RBP13.32□□□□□ -0.28
RHO-201ENST00000296271 SRGNP10124 158 aa13.32□□□□□ -0.28
RHO-201ENST00000296271 PDHBP11177 359 aa13.32□□□□□ -0.28
RHO-201ENST00000296271 TRAPPC10P48553 1259 aa13.32□□□□□ -0.28
RHO-201ENST00000296271 TCP10Q12799 353 aa13.32□□□□□ -0.28
RHO-201ENST00000296271 CDKAL1Q5VV42 579 aa13.32□□□□□ -0.28
RHO-201ENST00000296271 DTHD1Q6ZMT9 781 aa13.32□□□□□ -0.28
RHO-201ENST00000296271 BAG1Q99933 345 aaPredicted RBP13.32□□□□□ -0.28
RHO-201ENST00000296271 DISC1Q9NRI5 854 aa13.32□□□□□ -0.28
RHO-201ENST00000296271 USP40Q9NVE5 1235 aa13.32□□□□□ -0.28
RHO-201ENST00000296271 TAB2Q9NYJ8 693 aa13.32□□□□□ -0.28
RHO-201ENST00000296271 DACH1Q9UI36 760 aa13.32□□□□□ -0.28
RHO-201ENST00000296271 PSDA5PKW4 1024 aaPredicted RBP13.32□□□□□ -0.28
RHO-201ENST00000296271 RAD21O60216 631 aa13.32□□□□□ -0.28
RHO-201ENST00000296271 TECP42680 631 aa13.32□□□□□ -0.28
RHO-201ENST00000296271 ELF2Q15723 593 aa13.32□□□□□ -0.28
RHO-201ENST00000296271 POTEDQ86YR6 584 aa13.32□□□□□ -0.28
RHO-201ENST00000296271 ZC3H12CQ9C0D7 883 aaKnown RBP13.32□□□□□ -0.28
RHO-201ENST00000296271 SH3GLB2Q9NR46 395 aa13.32□□□□□ -0.28
RHO-201ENST00000296271 ADD3Q9UEY8 706 aaKnown RBP13.32□□□□□ -0.28
RHO-201ENST00000296271 ATP6V0A2Q9Y487 856 aa13.32□□□□□ -0.28
RHO-201ENST00000296271 KLRG2A4D1S0 409 aaPredicted RBP13.31□□□□□ -0.28
RHO-201ENST00000296271 ABL1P00519 1130 aa13.31□□□□□ -0.28
RHO-201ENST00000296271 MMP10P09238 476 aa13.31□□□□□ -0.28
RHO-201ENST00000296271 CBX1P83916 185 aa13.31□□□□□ -0.28
RHO-201ENST00000296271 KRT31Q15323 416 aa13.31□□□□□ -0.28
RHO-201ENST00000296271 SP8Q8IXZ3 490 aa13.31□□□□□ -0.28
RHO-201ENST00000296271 TBCKQ8TEA7 893 aa13.31□□□□□ -0.28
RHO-201ENST00000296271 NELFBQ8WX92 580 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms