RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 ANKRD20A3Q5VUR7 823 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 LRRN4CLQ8ND94 238 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 PIP4K2CQ8TBX8 421 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 KIFAP3Q92845 792 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 OMA1Q96E52 524 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 PCP4L1A6NKN8 68 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 ALDH1L1O75891 902 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 MBD4O95243 580 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 MX2P20592 715 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 NFKBIAP25963 317 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 KRT9P35527 623 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 RFC5P40937 340 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 CDC37Q16543 378 aaPredicted RBP12.88□□□□□ -0.35
SNIP1-201ENST00000296215 HAUS4Q9H6D7 363 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 POLD4Q9HCU8 107 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 MTMR6Q9Y217 621 aa12.88□□□□□ -0.35
SNIP1-201ENST00000296215 KRT5P13647 590 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 KCNJ6P48051 423 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 PMS2P54278 862 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 CCDC153Q494R4 210 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 ARHGEF1Q92888 912 aaKnown RBP12.87□□□□□ -0.35
SNIP1-201ENST00000296215 SH3GL2Q99962 352 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 ZWILCHQ9H900 591 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 KIAA1468Q9P260 1216 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 NFE2L3Q9Y4A8 694 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 SBNO1A3KN83 1393 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 BICDL2A1A5D9 508 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 MGEA5O60502 916 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 KCTD21Q4G0X4 260 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 ENOX1Q8TC92 643 aaKnown RBP12.87□□□□□ -0.35
SNIP1-201ENST00000296215 CDC5LQ99459 802 aaKnown RBP12.87□□□□□ -0.35
SNIP1-201ENST00000296215 STAT2P52630 851 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 C1QTNF12Q5T7M4 302 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 KANK3Q6NY19 840 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 LARP1Q6PKG0 1096 aaKnown RBP12.87□□□□□ -0.35
SNIP1-201ENST00000296215 LRRC27Q9C0I9 530 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 C10orf88Q9H8K7 445 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 UBTFL6P0CB48 400 aaPredicted RBP12.87□□□□□ -0.35
SNIP1-201ENST00000296215 HSPA9P38646 679 aaKnown RBP12.87□□□□□ -0.35
SNIP1-201ENST00000296215 USP14P54578 494 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 STX17P56962 302 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 CUL4AQ13619 759 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 KCNV1Q6PIU1 500 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 CDC37L1Q7L3B6 337 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 TRIML2Q8N7C3 387 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 MYCBPAPQ8TBZ2 947 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 DSEQ9UL01 958 aa12.87□□□□□ -0.35
SNIP1-201ENST00000296215 CD151P48509 253 aa12.86□□□□□ -0.35
SNIP1-201ENST00000296215 PDE1AP54750 535 aa12.86□□□□□ -0.35
SNIP1-201ENST00000296215 RASA3Q14644 834 aa12.86□□□□□ -0.35
SNIP1-201ENST00000296215 CCDC25Q86WR0 208 aa12.86□□□□□ -0.35
SNIP1-201ENST00000296215 ELOA2Q8IYF1 753 aaPredicted RBP12.86□□□□□ -0.35
SNIP1-201ENST00000296215 ZBTB8BQ8NAP8 495 aaPredicted RBP12.86□□□□□ -0.35
SNIP1-201ENST00000296215 CHMP6Q96FZ7 201 aa12.86□□□□□ -0.35
SNIP1-201ENST00000296215 SPDYE3A6NKU9 549 aa12.86□□□□□ -0.35
SNIP1-201ENST00000296215 NDC80O14777 642 aa12.86□□□□□ -0.35
SNIP1-201ENST00000296215 BEND3Q5T5X7 828 aa12.86□□□□□ -0.35
SNIP1-201ENST00000296215 OR8K1Q8NGG5 319 aa12.86□□□□□ -0.35
SNIP1-201ENST00000296215 CLIC6Q96NY7 704 aa12.86□□□□□ -0.35
SNIP1-201ENST00000296215 TRAPPC9Q96Q05 1148 aa12.86□□□□□ -0.35
SNIP1-201ENST00000296215 RAD54L2Q9Y4B4 1467 aa12.86□□□□□ -0.35
SNIP1-201ENST00000296215 CCT8L1PA6NM43 557 aa12.86□□□□□ -0.35
SNIP1-201ENST00000296215 ANKRD20A2Q5SQ80 823 aa12.86□□□□□ -0.35
SNIP1-201ENST00000296215 ANKRD20A1Q5TYW2 823 aa12.86□□□□□ -0.35
SNIP1-201ENST00000296215 NLRP9Q7RTR0 991 aa12.86□□□□□ -0.35
SNIP1-201ENST00000296215 CALML6Q8TD86 181 aa12.86□□□□□ -0.35
SNIP1-201ENST00000296215 CCDC51Q96ER9 411 aa12.86□□□□□ -0.35
SNIP1-201ENST00000296215 ARPC5LQ9BPX5 153 aa12.86□□□□□ -0.35
SNIP1-201ENST00000296215 IGHMBP2P38935 993 aaKnown RBP12.85□□□□□ -0.35
SNIP1-201ENST00000296215 MTIF2P46199 727 aaKnown RBP12.85□□□□□ -0.35
SNIP1-201ENST00000296215 CACNA2D1P54289 1103 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 DENND2CQ68D51 928 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 TCEANC2Q96MN5 208 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 FAM192AQ9GZU8 254 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 ZNF24P17028 368 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 UBXN1Q04323 297 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 TUBA3CQ13748 450 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 TRIM14Q14142 442 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 KPNB1Q14974 876 aaKnown RBP12.85□□□□□ -0.35
SNIP1-201ENST00000296215 C6orf118Q5T5N4 469 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 CRELD2Q6UXH1 353 aaPredicted RBP12.85□□□□□ -0.35
SNIP1-201ENST00000296215 MAB21L3Q8N8X9 362 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 ATP6V1G3Q96LB4 118 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 MAP2K7O14733 419 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 ACTN4O43707 911 aaKnown RBP12.85□□□□□ -0.35
SNIP1-201ENST00000296215 MRPS15P82914 257 aaKnown RBP12.85□□□□□ -0.35
SNIP1-201ENST00000296215 TMC5Q6UXY8 1006 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 FAM47EQ6ZV65 393 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 MAEAQ7L5Y9 396 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 YTHDF3Q7Z739 585 aaKnown RBP12.85□□□□□ -0.35
SNIP1-201ENST00000296215 SLC39A3Q9BRY0 314 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 BRD8Q9H0E9 1235 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 ARHGEF10LQ9HCE6 1279 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 BACH1O14867 736 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 MARCKSP29966 332 aaPredicted RBP12.85□□□□□ -0.35
SNIP1-201ENST00000296215 C2orf54Q08AI8 447 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 ITGA7Q13683 1181 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 ACCSLQ4AC99 568 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 ATL3Q6DD88 541 aa12.85□□□□□ -0.35
SNIP1-201ENST00000296215 CCSAPQ6IQ19 270 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms