RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 SMCO2A6NFE2 343 aa15.89■□□□□ 0.13
NXF1-201ENST00000294172 SFPQP23246 707 aaKnown RBP eCLIP15.89■□□□□ 0.13
NXF1-201ENST00000294172 GABPAQ06546 454 aa15.89■□□□□ 0.13
NXF1-201ENST00000294172 ARL6IP4Q66PJ3 421 aaKnown RBP15.89■□□□□ 0.13
NXF1-201ENST00000294172 DAGLBQ8NCG7 672 aa15.89■□□□□ 0.13
NXF1-201ENST00000294172 USP27XA6NNY8 438 aa15.89■□□□□ 0.13
NXF1-201ENST00000294172 PDHBP11177 359 aa15.89■□□□□ 0.13
NXF1-201ENST00000294172 DPYDQ12882 1025 aa15.89■□□□□ 0.13
NXF1-201ENST00000294172 DTHD1Q6ZMT9 781 aa15.89■□□□□ 0.13
NXF1-201ENST00000294172 KIAA0825Q8IV33 1275 aa15.89■□□□□ 0.13
NXF1-201ENST00000294172 SMYD4Q8IYR2 804 aaPredicted RBP15.89■□□□□ 0.13
NXF1-201ENST00000294172 CCDC150Q8NCX0 1101 aa15.89■□□□□ 0.13
NXF1-201ENST00000294172 MYRIPQ8NFW9 859 aa15.89■□□□□ 0.13
NXF1-201ENST00000294172 ENOX1Q8TC92 643 aaKnown RBP15.89■□□□□ 0.13
NXF1-201ENST00000294172 CCDC12Q8WUD4 166 aaPredicted RBP15.89■□□□□ 0.13
NXF1-201ENST00000294172 TMEM232C9JQI7 657 aa15.88■□□□□ 0.13
NXF1-201ENST00000294172 H0YIN7 160 aa15.88■□□□□ 0.13
NXF1-201ENST00000294172 MPHOSPH10O00566 681 aaKnown RBP15.88■□□□□ 0.13
NXF1-201ENST00000294172 DYNC1I1O14576 645 aa15.88■□□□□ 0.13
NXF1-201ENST00000294172 LONP1P36776 959 aaKnown RBP15.88■□□□□ 0.13
NXF1-201ENST00000294172 TXLNAP40222 546 aa15.88■□□□□ 0.13
NXF1-201ENST00000294172 NFIAQ12857 509 aa15.88■□□□□ 0.13
NXF1-201ENST00000294172 E2F4Q16254 413 aa15.88■□□□□ 0.13
NXF1-201ENST00000294172 SOGA3Q5TF21 947 aa15.88■□□□□ 0.13
NXF1-201ENST00000294172 APOBEC3HQ6NTF7 200 aaKnown RBP15.88■□□□□ 0.13
NXF1-201ENST00000294172 RASSF8Q8NHQ8 419 aa15.88■□□□□ 0.13
NXF1-201ENST00000294172 ZMYND12Q9H0C1 365 aa15.88■□□□□ 0.13
NXF1-201ENST00000294172 TMEM60Q9H2L4 133 aa15.88■□□□□ 0.13
NXF1-201ENST00000294172 C6orf50Q9HD87 102 aa15.88■□□□□ 0.13
NXF1-201ENST00000294172 TRMT1Q9NXH9 659 aaKnown RBP15.88■□□□□ 0.13
NXF1-201ENST00000294172 MYO1BO43795 1136 aa15.88■□□□□ 0.13
NXF1-201ENST00000294172 SLURP2P0DP57 97 aa15.88■□□□□ 0.13
NXF1-201ENST00000294172 TNNT1P13805 278 aa15.88■□□□□ 0.13
NXF1-201ENST00000294172 CRKP46108 304 aa15.88■□□□□ 0.13
NXF1-201ENST00000294172 RBM5P52756 815 aaKnown RBP eCLIP15.88■□□□□ 0.134e-6■■■■□ 21.7
NXF1-201ENST00000294172 STX17P56962 302 aa15.88■□□□□ 0.13
NXF1-201ENST00000294172 ATP2B2Q01814 1243 aa15.88■□□□□ 0.13
NXF1-201ENST00000294172 HHIPL2Q6UWX4 724 aa15.88■□□□□ 0.13
NXF1-201ENST00000294172 GSDMAQ96QA5 445 aa15.88■□□□□ 0.13
NXF1-201ENST00000294172 MED15Q96RN5 788 aa15.88■□□□□ 0.13
NXF1-201ENST00000294172 PDCL3Q9H2J4 239 aa15.88■□□□□ 0.13
NXF1-201ENST00000294172 SAMSN1Q9NSI8 373 aaKnown RBP15.88■□□□□ 0.13
NXF1-201ENST00000294172 CHRNA5P30532 468 aa15.87■□□□□ 0.13
NXF1-201ENST00000294172 NOVP48745 357 aa15.87■□□□□ 0.13
NXF1-201ENST00000294172 CACNB3P54284 484 aa15.87■□□□□ 0.13
NXF1-201ENST00000294172 KARSQ15046 597 aaKnown RBP15.87■□□□□ 0.13
NXF1-201ENST00000294172 PODNQ7Z5L7 613 aa15.87■□□□□ 0.13
NXF1-201ENST00000294172 GPCPD1Q9NPB8 672 aa15.87■□□□□ 0.13
NXF1-201ENST00000294172 PCDHAC2Q9Y5I4 1007 aa15.87■□□□□ 0.13
NXF1-201ENST00000294172 PP2D1A8MPX8 630 aa15.86■□□□□ 0.13
NXF1-201ENST00000294172 HLA-DOAP06340 250 aa15.86■□□□□ 0.13
NXF1-201ENST00000294172 CD44P16070 742 aaKnown RBP15.86■□□□□ 0.13
NXF1-201ENST00000294172 RXRBP28702 533 aa15.86■□□□□ 0.13
NXF1-201ENST00000294172 ERCC5P28715 1186 aaPredicted RBP15.86■□□□□ 0.13
NXF1-201ENST00000294172 GNA11P29992 359 aa15.86■□□□□ 0.13
NXF1-201ENST00000294172 TCP10Q12799 353 aa15.86■□□□□ 0.13
NXF1-201ENST00000294172 LETM2Q2VYF4 491 aa15.86■□□□□ 0.13
NXF1-201ENST00000294172 PDXDC2PQ6P474 469 aa15.86■□□□□ 0.13
NXF1-201ENST00000294172 VSTM4Q8IW00 320 aa15.86■□□□□ 0.13
NXF1-201ENST00000294172 ZFPM1Q8IX07 1006 aa15.86■□□□□ 0.13
NXF1-201ENST00000294172 PYM1Q9BRP8 204 aaKnown RBP15.86■□□□□ 0.13
NXF1-201ENST00000294172 NRXN2Q9P2S2 1712 aa15.86■□□□□ 0.13
NXF1-201ENST00000294172 COL11A2P13942 1736 aaPredicted RBP15.86■□□□□ 0.13
NXF1-201ENST00000294172 CCNT1O60563 726 aaKnown RBP15.86■□□□□ 0.13
NXF1-201ENST00000294172 TTLL1O95922 423 aa15.86■□□□□ 0.13
NXF1-201ENST00000294172 ZNF18P17022 549 aa15.86■□□□□ 0.13
NXF1-201ENST00000294172 SHMT1P34896 483 aa15.86■□□□□ 0.13
NXF1-201ENST00000294172 STAT6P42226 847 aa15.86■□□□□ 0.13
NXF1-201ENST00000294172 CUL4BQ13620 913 aa15.86■□□□□ 0.13
NXF1-201ENST00000294172 BIN2Q9UBW5 565 aaPredicted RBP15.86■□□□□ 0.13
NXF1-201ENST00000294172 SWAP70Q9UH65 585 aa15.86■□□□□ 0.13
NXF1-201ENST00000294172 SMARCA1P28370 1054 aa15.85■□□□□ 0.13
NXF1-201ENST00000294172 NONOQ15233 471 aaKnown RBP eCLIP15.85■□□□□ 0.13
NXF1-201ENST00000294172 JAKMIP3Q5VZ66 844 aa15.85■□□□□ 0.13
NXF1-201ENST00000294172 KRT25Q7Z3Z0 450 aa15.85■□□□□ 0.13
NXF1-201ENST00000294172 ZNF592Q92610 1267 aa15.85■□□□□ 0.13
NXF1-201ENST00000294172 PLIN2Q99541 437 aa15.85■□□□□ 0.13
NXF1-201ENST00000294172 MTRQ99707 1265 aa15.85■□□□□ 0.13
NXF1-201ENST00000294172 INTS13Q9NVM9 706 aa15.85■□□□□ 0.13
NXF1-201ENST00000294172 PLIN4Q96Q06 1357 aa15.85■□□□□ 0.13
NXF1-201ENST00000294172 UBA7P41226 1012 aa15.85■□□□□ 0.13
NXF1-201ENST00000294172 GOLGA8FQ08AF8 430 aa15.85■□□□□ 0.13
NXF1-201ENST00000294172 GOLGA8DPQ0D2H9 430 aa15.85■□□□□ 0.13
NXF1-201ENST00000294172 TSC1Q92574 1164 aa15.85■□□□□ 0.13
NXF1-201ENST00000294172 COA7Q96BR5 231 aa15.85■□□□□ 0.13
NXF1-201ENST00000294172 RIOX1Q9H6W3 641 aa15.85■□□□□ 0.13
NXF1-201ENST00000294172 IGKV6D-41A0A0C4DH26 115 aa15.84■□□□□ 0.13
NXF1-201ENST00000294172 RIOK3O14730 519 aaKnown RBP15.84■□□□□ 0.13
NXF1-201ENST00000294172 GTPBP6O43824 516 aaPredicted RBP15.84■□□□□ 0.13
NXF1-201ENST00000294172 NRDCO43847 1150 aa15.84■□□□□ 0.13
NXF1-201ENST00000294172 RAD21O60216 631 aa15.84■□□□□ 0.13
NXF1-201ENST00000294172 ECE2O60344 883 aa15.84■□□□□ 0.13
NXF1-201ENST00000294172 COBLO75128 1261 aa15.84■□□□□ 0.13
NXF1-201ENST00000294172 ASPRV1Q53RT3 343 aa15.84■□□□□ 0.13
NXF1-201ENST00000294172 CCAR2Q8N163 923 aaKnown RBP15.84■□□□□ 0.13
NXF1-201ENST00000294172 TMEM260Q9NX78 707 aa15.84■□□□□ 0.13
NXF1-201ENST00000294172 FOCADQ5VW36 1801 aa15.84■□□□□ 0.13
NXF1-201ENST00000294172 SYNRGQ9UMZ2 1314 aa15.84■□□□□ 0.13
NXF1-201ENST00000294172 ADAMTSL1Q8N6G6 1762 aa15.84■□□□□ 0.13
NXF1-201ENST00000294172 FAM196BA6NMK8 535 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms