RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 USP17L8P0C7I0 530 aa7.76□□□□□ -1.17
VPS8-201ENST00000287546 ORC2Q13416 577 aaPredicted RBP7.76□□□□□ -1.17
VPS8-201ENST00000287546 PODNQ7Z5L7 613 aa7.76□□□□□ -1.17
VPS8-201ENST00000287546 RIOK1Q9BRS2 568 aaKnown RBP7.76□□□□□ -1.17
VPS8-201ENST00000287546 MYH3P11055 1940 aa7.76□□□□□ -1.17
VPS8-201ENST00000287546 ITGB4P16144 1822 aa7.76□□□□□ -1.17
VPS8-201ENST00000287546 GPSM2P81274 684 aa7.76□□□□□ -1.17
VPS8-201ENST00000287546 FANCCQ00597 558 aa7.76□□□□□ -1.17
VPS8-201ENST00000287546 PFKFB3Q16875 520 aaPredicted RBP7.76□□□□□ -1.17
VPS8-201ENST00000287546 GSDMAQ96QA5 445 aa7.76□□□□□ -1.17
VPS8-201ENST00000287546 FTOQ9C0B1 505 aaKnown RBP eCLIP7.76□□□□□ -1.17
VPS8-201ENST00000287546 SERPINB13Q9UIV8 391 aa7.76□□□□□ -1.17
VPS8-201ENST00000287546 PAPPAQ13219 1627 aa7.76□□□□□ -1.17
VPS8-201ENST00000287546 CCDC175P0C221 793 aa7.76□□□□□ -1.17
VPS8-201ENST00000287546 ERCC5P28715 1186 aaPredicted RBP7.76□□□□□ -1.17
VPS8-201ENST00000287546 ARL1P40616 181 aaPredicted RBP7.76□□□□□ -1.17
VPS8-201ENST00000287546 C15orf52Q6ZUT6 534 aaKnown RBP7.76□□□□□ -1.17
VPS8-201ENST00000287546 N4BP3O15049 544 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 SEMA3FQ13275 785 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 TRIM14Q14142 442 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 CCDC174Q6PII3 467 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 PDCL2Q8N4E4 241 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 SH3RF3Q8TEJ3 882 aaPredicted RBP7.75□□□□□ -1.17
VPS8-201ENST00000287546 AK8Q96MA6 479 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 ZNF830Q96NB3 372 aaPredicted RBP7.75□□□□□ -1.17
VPS8-201ENST00000287546 AIFM3Q96NN9 605 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 ARHGEF10LQ9HCE6 1279 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 SERTAD1Q9UHV2 236 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 CYP2D7A0A087X1C5 515 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 CDK8P49336 464 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 SNW1Q13573 536 aaKnown RBP7.75□□□□□ -1.17
VPS8-201ENST00000287546 GRM4Q14833 912 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 DIXDC1Q155Q3 683 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 RBM43Q6ZSC3 357 aaKnown RBP7.75□□□□□ -1.17
VPS8-201ENST00000287546 ELOA2Q8IYF1 753 aaPredicted RBP7.75□□□□□ -1.17
VPS8-201ENST00000287546 CMTR1Q8N1G2 835 aaKnown RBP7.75□□□□□ -1.17
VPS8-201ENST00000287546 TRIM47Q96LD4 638 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 ATP6V0A2Q9Y487 856 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 SYNRGQ9UMZ2 1314 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 SMCO2A6NFE2 343 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 TTLL1O95922 423 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 CETN1Q12798 172 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 LETM2Q2VYF4 491 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 C16orf45Q96MC5 204 aaPredicted RBP7.75□□□□□ -1.17
VPS8-201ENST00000287546 LBHD1Q9BQE6 289 aaPredicted RBP7.75□□□□□ -1.17
VPS8-201ENST00000287546 ZBED2Q9BTP6 218 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 NUP98P52948 1817 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 SPDYE3A6NKU9 549 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 GTPBP6O43824 516 aaPredicted RBP7.75□□□□□ -1.17
VPS8-201ENST00000287546 MMP10P09238 476 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 SLFN14P0C7P3 912 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 PTGDRQ13258 359 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 NEK8Q86SG6 692 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 NEDD1Q8NHV4 660 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 TBC1D16Q8TBP0 767 aa7.75□□□□□ -1.17
VPS8-201ENST00000287546 DDX23Q9BUQ8 820 aaKnown RBP7.75□□□□□ -1.17
VPS8-201ENST00000287546 PSDA5PKW4 1024 aaPredicted RBP7.74□□□□□ -1.17
VPS8-201ENST00000287546 SLC1A4P43007 532 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 ASIC1P78348 528 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 PNOCQ13519 176 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 ARHGAP29Q52LW3 1261 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 CEP135Q66GS9 1140 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 TRMT1LQ7Z2T5 733 aaKnown RBP7.74□□□□□ -1.17
VPS8-201ENST00000287546 HACE1Q8IYU2 909 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 ALS2CR12Q96Q35 445 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 A0A0G2JLW4 131 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 RRP9O43818 475 aaKnown RBP7.74□□□□□ -1.17
VPS8-201ENST00000287546 GYS1P13807 737 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 NR5A1Q13285 461 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 RAB3IL1Q8TBN0 382 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 CAGE1Q8TC20 777 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 TCHPQ9BT92 498 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 NFE2L3Q9Y4A8 694 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 PCDHA5Q9Y5H7 936 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 ZNF827Q17R98 1081 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 FAM47CQ5HY64 1035 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 CNNM4Q6P4Q7 775 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 STXBP4Q6ZWJ1 553 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 SV2BQ7L1I2 683 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 CNGA4Q8IV77 575 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 CLIC6Q96NY7 704 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 CSADQ9Y600 493 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 ANKRD36CQ5JPF3 1778 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 hCG_1642624A0A1W2PR95 340 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 PPIP5K2O43314 1243 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 KIF5CO60282 957 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 CCNT1O60563 726 aaKnown RBP7.74□□□□□ -1.17
VPS8-201ENST00000287546 PLEKHA8P1O95397 391 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 OR52Z1P0C646 297 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 SMARCA1P28370 1054 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 MTIF2P46199 727 aaKnown RBP7.74□□□□□ -1.17
VPS8-201ENST00000287546 SMC1AQ14683 1233 aaKnown RBP7.74□□□□□ -1.17
VPS8-201ENST00000287546 C1orf228Q6PIY5 440 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 HOOK3Q86VS8 718 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 LARGE2Q8N3Y3 721 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 BICD1Q96G01 975 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 TSNARE1Q96NA8 513 aa7.74□□□□□ -1.17
VPS8-201ENST00000287546 NUP88Q99567 741 aaPredicted RBP7.74□□□□□ -1.17
VPS8-201ENST00000287546 PDGFDQ9GZP0 370 aaPredicted RBP7.74□□□□□ -1.17
VPS8-201ENST00000287546 CSRNP2Q9H175 543 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms