RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 BLZF1Q9H2G9 400 aa12.8□□□□□ -0.36
SCLT1-201ENST00000281142 TAB2Q9NYJ8 693 aa12.8□□□□□ -0.36
SCLT1-201ENST00000281142 MYO6Q9UM54 1294 aa12.8□□□□□ -0.36
SCLT1-201ENST00000281142 GUCA1BQ9UMX6 200 aa12.8□□□□□ -0.36
SCLT1-201ENST00000281142 REXO2Q9Y3B8 237 aaKnown RBP12.8□□□□□ -0.36
SCLT1-201ENST00000281142 PPP1R3GB7ZBB8 358 aa12.79□□□□□ -0.36
SCLT1-201ENST00000281142 CCDC152Q4G0S7 254 aa12.79□□□□□ -0.36
SCLT1-201ENST00000281142 CT47A1Q5JQC4 288 aaPredicted RBP12.79□□□□□ -0.36
SCLT1-201ENST00000281142 CAPZA3Q96KX2 299 aa12.79□□□□□ -0.36
SCLT1-201ENST00000281142 BRIP1Q9BX63 1249 aa12.79□□□□□ -0.36
SCLT1-201ENST00000281142 EPB41L4AQ9HCS5 686 aaPredicted RBP12.79□□□□□ -0.36
SCLT1-201ENST00000281142 CACNA1SQ13698 1873 aa12.79□□□□□ -0.36
SCLT1-201ENST00000281142 KRT31Q15323 416 aa12.79□□□□□ -0.36
SCLT1-201ENST00000281142 E2F4Q16254 413 aa12.79□□□□□ -0.36
SCLT1-201ENST00000281142 TRIML1Q8N9V2 468 aa12.79□□□□□ -0.36
SCLT1-201ENST00000281142 PAGE5Q96GU1 130 aa12.79□□□□□ -0.36
SCLT1-201ENST00000281142 MMS19Q96T76 1030 aa12.79□□□□□ -0.36
SCLT1-201ENST00000281142 NAA15Q9BXJ9 866 aaKnown RBP12.79□□□□□ -0.36
SCLT1-201ENST00000281142 EHD4Q9H223 541 aa12.79□□□□□ -0.36
SCLT1-201ENST00000281142 ABHD10Q9NUJ1 306 aa12.79□□□□□ -0.36
SCLT1-201ENST00000281142 SRPRBQ9Y5M8 271 aaKnown RBP12.79□□□□□ -0.36
SCLT1-201ENST00000281142 C10orf71Q711Q0 1435 aa12.78□□□□□ -0.36
SCLT1-201ENST00000281142 KLRG2A4D1S0 409 aaPredicted RBP12.78□□□□□ -0.36
SCLT1-201ENST00000281142 MYBL2P10244 700 aa12.78□□□□□ -0.36
SCLT1-201ENST00000281142 IFIT5Q13325 482 aaKnown RBP12.78□□□□□ -0.36
SCLT1-201ENST00000281142 SAFBQ15424 915 aaKnown RBP eCLIP12.78□□□□□ -0.36
SCLT1-201ENST00000281142 CRY2Q49AN0 593 aa12.78□□□□□ -0.36
SCLT1-201ENST00000281142 ELOA2Q8IYF1 753 aaPredicted RBP12.78□□□□□ -0.36
SCLT1-201ENST00000281142 NUP88Q99567 741 aaPredicted RBP12.78□□□□□ -0.36
SCLT1-201ENST00000281142 MAPK8IP1Q9UQF2 711 aa12.78□□□□□ -0.36
SCLT1-201ENST00000281142 AKAP11Q9UKA4 1901 aa12.78□□□□□ -0.36
SCLT1-201ENST00000281142 RTL9Q8NET4 1388 aa12.78□□□□□ -0.36
SCLT1-201ENST00000281142 PRPF6O94906 941 aaKnown RBP12.78□□□□□ -0.36
SCLT1-201ENST00000281142 CORO7P57737 925 aa12.78□□□□□ -0.36
SCLT1-201ENST00000281142 WHAMMP3Q1A5X7 153 aa12.78□□□□□ -0.36
SCLT1-201ENST00000281142 SGMS1Q86VZ5 419 aa12.78□□□□□ -0.36
SCLT1-201ENST00000281142 TMEM87BQ96K49 555 aa12.78□□□□□ -0.36
SCLT1-201ENST00000281142 TTF2Q9UNY4 1162 aaKnown RBP12.78□□□□□ -0.36
SCLT1-201ENST00000281142 KIAA1551Q9HCM1 1747 aa12.78□□□□□ -0.36
SCLT1-201ENST00000281142 LRP5O75197 1615 aa12.78□□□□□ -0.36
SCLT1-201ENST00000281142 ZC3H4Q9UPT8 1303 aaKnown RBP12.78□□□□□ -0.36
SCLT1-201ENST00000281142 N4BP3O15049 544 aa12.77□□□□□ -0.36
SCLT1-201ENST00000281142 ATP1A1P05023 1023 aaKnown RBP12.77□□□□□ -0.36
SCLT1-201ENST00000281142 POLD1P28340 1107 aa12.77□□□□□ -0.36
SCLT1-201ENST00000281142 TICAM2Q86XR7 235 aa12.77□□□□□ -0.36
SCLT1-201ENST00000281142 NUP133Q8WUM0 1156 aa12.77□□□□□ -0.36
SCLT1-201ENST00000281142 SYMPKQ92797 1274 aaKnown RBP12.77□□□□□ -0.36
SCLT1-201ENST00000281142 ANKRD18BA2A2Z9 1011 aa12.77□□□□□ -0.37
SCLT1-201ENST00000281142 SMIM22K7EJ46 135 aa12.77□□□□□ -0.37
SCLT1-201ENST00000281142 PRKAB2O43741 272 aa12.77□□□□□ -0.37
SCLT1-201ENST00000281142 PRDM1O75626 825 aa12.77□□□□□ -0.37
SCLT1-201ENST00000281142 IFNAR1P17181 557 aa12.77□□□□□ -0.37
SCLT1-201ENST00000281142 RILPL1Q5EBL4 403 aa12.77□□□□□ -0.37
SCLT1-201ENST00000281142 METTL24Q5JXM2 366 aa12.77□□□□□ -0.37
SCLT1-201ENST00000281142 EP400NLQ6ZTU2 488 aa12.77□□□□□ -0.37
SCLT1-201ENST00000281142 CNGA4Q8IV77 575 aa12.77□□□□□ -0.37
SCLT1-201ENST00000281142 HPCAL4Q9UM19 191 aa12.77□□□□□ -0.37
SCLT1-201ENST00000281142 UTRNP46939 3433 aa12.77□□□□□ -0.37
SCLT1-201ENST00000281142 PDE6AP16499 860 aa12.77□□□□□ -0.37
SCLT1-201ENST00000281142 KRT9P35527 623 aa12.77□□□□□ -0.37
SCLT1-201ENST00000281142 AFAP1L1Q8TED9 768 aa12.77□□□□□ -0.37
SCLT1-201ENST00000281142 CELF1Q92879 486 aaKnown RBP12.77□□□□□ -0.37
SCLT1-201ENST00000281142 DLEC1Q9Y238 1755 aa12.77□□□□□ -0.37
SCLT1-201ENST00000281142 SNAP23O00161 211 aa12.76□□□□□ -0.37
SCLT1-201ENST00000281142 PHKA1P46020 1223 aa12.76□□□□□ -0.37
SCLT1-201ENST00000281142 MRPS25P82663 173 aaKnown RBP12.76□□□□□ -0.37
SCLT1-201ENST00000281142 RTN1Q16799 776 aa12.76□□□□□ -0.37
SCLT1-201ENST00000281142 FILIP1LQ4L180 1135 aa12.76□□□□□ -0.37
SCLT1-201ENST00000281142 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.76□□□□□ -0.37
SCLT1-201ENST00000281142 VPS54Q9P1Q0 977 aa12.76□□□□□ -0.37
SCLT1-201ENST00000281142 STK36Q9NRP7 1315 aa12.76□□□□□ -0.37
SCLT1-201ENST00000281142 A0A1B0GUL6 1792 aa12.76□□□□□ -0.37
SCLT1-201ENST00000281142 SRGNP10124 158 aa12.76□□□□□ -0.37
SCLT1-201ENST00000281142 PDE6BP35913 854 aa12.76□□□□□ -0.37
SCLT1-201ENST00000281142 GGCXP38435 758 aa12.76□□□□□ -0.37
SCLT1-201ENST00000281142 USP14P54578 494 aa12.76□□□□□ -0.37
SCLT1-201ENST00000281142 SLC51AQ86UW1 340 aa12.76□□□□□ -0.37
SCLT1-201ENST00000281142 MSL3Q8N5Y2 521 aaKnown RBP12.76□□□□□ -0.37
SCLT1-201ENST00000281142 PPM1EQ8WY54 764 aa12.76□□□□□ -0.37
SCLT1-201ENST00000281142 STRBPQ96SI9 672 aaKnown RBP12.76□□□□□ -0.37
SCLT1-201ENST00000281142 DEF6Q9H4E7 631 aa12.76□□□□□ -0.37
SCLT1-201ENST00000281142 ARMT1Q9H993 441 aa12.76□□□□□ -0.37
SCLT1-201ENST00000281142 MKRN1Q9UHC7 482 aaKnown RBP12.76□□□□□ -0.37
SCLT1-201ENST00000281142 ZNF185O15231 689 aa12.75□□□□□ -0.37
SCLT1-201ENST00000281142 FECHP22830 423 aa12.75□□□□□ -0.37
SCLT1-201ENST00000281142 CHRNA5P30532 468 aa12.75□□□□□ -0.37
SCLT1-201ENST00000281142 WDR93Q6P2C0 686 aa12.75□□□□□ -0.37
SCLT1-201ENST00000281142 SH3RF1Q7Z6J0 888 aa12.75□□□□□ -0.37
SCLT1-201ENST00000281142 TMTC1Q8IUR5 882 aa12.75□□□□□ -0.37
SCLT1-201ENST00000281142 ZNF579Q8NAF0 562 aaKnown RBP12.75□□□□□ -0.37
SCLT1-201ENST00000281142 RPGRQ92834 1020 aaKnown RBP12.75□□□□□ -0.37
SCLT1-201ENST00000281142 GBP3Q9H0R5 595 aa12.75□□□□□ -0.37
SCLT1-201ENST00000281142 FOXP1Q9H334 677 aaPredicted RBP12.75□□□□□ -0.37
SCLT1-201ENST00000281142 MED4Q9NPJ6 270 aa12.75□□□□□ -0.37
SCLT1-201ENST00000281142 PPFIA4O75335 1185 aa12.75□□□□□ -0.37
SCLT1-201ENST00000281142 TRAPPC11Q7Z392 1133 aa12.75□□□□□ -0.37
SCLT1-201ENST00000281142 CCDC148Q8NFR7 591 aa12.75□□□□□ -0.37
SCLT1-201ENST00000281142 HELBQ8NG08 1087 aaPredicted RBP12.75□□□□□ -0.37
SCLT1-201ENST00000281142 AIDAQ96BJ3 306 aa12.75□□□□□ -0.37
SCLT1-201ENST00000281142 XDHP47989 1333 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms