RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 PPP2R5BQ15173 497 aa16.31■□□□□ 0.2
CNOT9-201ENST00000273064 ARMCX5Q6P1M9 558 aa16.31■□□□□ 0.2
CNOT9-201ENST00000273064 C3orf67Q6ZVT6 689 aa16.31■□□□□ 0.2
CNOT9-201ENST00000273064 ZNF34Q8IZ26 560 aa16.31■□□□□ 0.2
CNOT9-201ENST00000273064 BICDL2A1A5D9 508 aa16.31■□□□□ 0.2
CNOT9-201ENST00000273064 TACC1O75410 805 aa16.31■□□□□ 0.2
CNOT9-201ENST00000273064 RESP18Q5W5W9 173 aa16.31■□□□□ 0.2
CNOT9-201ENST00000273064 MAATS1Q7Z4T9 603 aa16.31■□□□□ 0.2
CNOT9-201ENST00000273064 SRBD1Q8N5C6 995 aaKnown RBP16.31■□□□□ 0.2
CNOT9-201ENST00000273064 PCDHB13Q9Y5F0 798 aa16.31■□□□□ 0.2
CNOT9-201ENST00000273064 COL15A1P39059 1388 aa16.31■□□□□ 0.2
CNOT9-201ENST00000273064 MEIS1O00470 390 aa16.31■□□□□ 0.2
CNOT9-201ENST00000273064 KRT25Q7Z3Z0 450 aa16.31■□□□□ 0.2
CNOT9-201ENST00000273064 NEK8Q86SG6 692 aa16.31■□□□□ 0.2
CNOT9-201ENST00000273064 NAPGQ99747 312 aaPredicted RBP16.31■□□□□ 0.2
CNOT9-201ENST00000273064 MXD3Q9BW11 206 aa16.31■□□□□ 0.2
CNOT9-201ENST00000273064 PCDHA12Q9UN75 941 aa16.31■□□□□ 0.2
CNOT9-201ENST00000273064 CAMTA2O94983 1202 aa16.3■□□□□ 0.2
CNOT9-201ENST00000273064 OR52Z1P0C646 297 aa16.3■□□□□ 0.2
CNOT9-201ENST00000273064 FMR1Q06787 632 aaKnown RBP eCLIP16.3■□□□□ 0.2
CNOT9-201ENST00000273064 IQCEQ6IPM2 695 aa16.3■□□□□ 0.2
CNOT9-201ENST00000273064 CYP26C1Q6V0L0 522 aa16.3■□□□□ 0.2
CNOT9-201ENST00000273064 CWC15Q9P013 229 aaKnown RBP16.3■□□□□ 0.2
CNOT9-201ENST00000273064 KRT83P78385 493 aa16.3■□□□□ 0.2
CNOT9-201ENST00000273064 LLGL1Q15334 1064 aa16.3■□□□□ 0.2
CNOT9-201ENST00000273064 TOGARAM2Q6ZUX3 1019 aa16.3■□□□□ 0.2
CNOT9-201ENST00000273064 ADGRA1Q86SQ6 560 aa16.3■□□□□ 0.2
CNOT9-201ENST00000273064 VPS36Q86VN1 386 aa16.3■□□□□ 0.2
CNOT9-201ENST00000273064 SLC35F6Q8N357 371 aa16.3■□□□□ 0.2
CNOT9-201ENST00000273064 KIFC2Q96AC6 838 aa16.3■□□□□ 0.2
CNOT9-201ENST00000273064 SCAF8Q9UPN6 1271 aaKnown RBP16.3■□□□□ 0.2
CNOT9-201ENST00000273064 CDHR2Q9BYE9 1310 aa16.3■□□□□ 0.2
CNOT9-201ENST00000273064 CAPN2P17655 700 aa16.3■□□□□ 0.2
CNOT9-201ENST00000273064 TMTC3Q6ZXV5 915 aa16.3■□□□□ 0.2
CNOT9-201ENST00000273064 ERMNQ8TAM6 284 aa16.3■□□□□ 0.2
CNOT9-201ENST00000273064 JAKMIP2Q96AA8 810 aa16.3■□□□□ 0.2
CNOT9-201ENST00000273064 PSTPIP2Q9H939 334 aa16.3■□□□□ 0.2
CNOT9-201ENST00000273064 BUB1O43683 1085 aa16.3■□□□□ 0.2
CNOT9-201ENST00000273064 COPB1P53618 953 aaKnown RBP16.3■□□□□ 0.2
CNOT9-201ENST00000273064 NCBP1Q09161 790 aaKnown RBP16.3■□□□□ 0.2
CNOT9-201ENST00000273064 OR8K1Q8NGG5 319 aa16.3■□□□□ 0.2
CNOT9-201ENST00000273064 GJA10Q969M2 543 aa16.3■□□□□ 0.2
CNOT9-201ENST00000273064 FAM13AO94988 1023 aa16.29■□□□□ 0.2
CNOT9-201ENST00000273064 MAGEA1P43355 309 aa16.29■□□□□ 0.2
CNOT9-201ENST00000273064 TMEM260Q9NX78 707 aa16.29■□□□□ 0.2
CNOT9-201ENST00000273064 PCDHA1Q9Y5I3 950 aa16.29■□□□□ 0.2
CNOT9-201ENST00000273064 CXCR5P32302 372 aa16.29■□□□□ 0.2
CNOT9-201ENST00000273064 CDK8P49336 464 aa16.29■□□□□ 0.2
CNOT9-201ENST00000273064 TMEM47Q9BQJ4 181 aa16.29■□□□□ 0.2
CNOT9-201ENST00000273064 QTRT2Q9H974 415 aaKnown RBP16.29■□□□□ 0.2
CNOT9-201ENST00000273064 RSPH14Q9UHP6 348 aa16.29■□□□□ 0.2
CNOT9-201ENST00000273064 SMIM23A6NLE4 172 aa16.29■□□□□ 0.2
CNOT9-201ENST00000273064 KIF20AO95235 890 aa16.29■□□□□ 0.2
CNOT9-201ENST00000273064 GJC1P36383 396 aa16.29■□□□□ 0.2
CNOT9-201ENST00000273064 EVX2Q03828 476 aa16.29■□□□□ 0.2
CNOT9-201ENST00000273064 FBXO38Q6PIJ6 1188 aa16.29■□□□□ 0.2
CNOT9-201ENST00000273064 PTF1AQ7RTS3 328 aa16.29■□□□□ 0.2
CNOT9-201ENST00000273064 VSTM4Q8IW00 320 aa16.29■□□□□ 0.2
CNOT9-201ENST00000273064 TPH2Q8IWU9 490 aa16.29■□□□□ 0.2
CNOT9-201ENST00000273064 CEP112Q8N8E3 955 aa16.29■□□□□ 0.2
CNOT9-201ENST00000273064 SMCR8Q8TEV9 937 aaPredicted RBP16.29■□□□□ 0.2
CNOT9-201ENST00000273064 TRIM31Q9BZY9 425 aa16.29■□□□□ 0.2
CNOT9-201ENST00000273064 XDHP47989 1333 aa16.29■□□□□ 0.2
CNOT9-201ENST00000273064 IKBKBO14920 756 aa16.28■□□□□ 0.2
CNOT9-201ENST00000273064 PRPF3O43395 683 aaKnown RBP16.28■□□□□ 0.2
CNOT9-201ENST00000273064 GTPBP6O43824 516 aaPredicted RBP16.28■□□□□ 0.2
CNOT9-201ENST00000273064 ATP2C2O75185 946 aa16.28■□□□□ 0.2
CNOT9-201ENST00000273064 TMTC1Q8IUR5 882 aa16.28■□□□□ 0.2
CNOT9-201ENST00000273064 LINC00116Q8NCU8 138 aa16.28■□□□□ 0.2
CNOT9-201ENST00000273064 TEKT1Q969V4 418 aa16.28■□□□□ 0.2
CNOT9-201ENST00000273064 SPTLC3Q9NUV7 552 aa16.28■□□□□ 0.2
CNOT9-201ENST00000273064 PXDNLA1KZ92 1463 aa16.28■□□□□ 0.2
CNOT9-201ENST00000273064 POTEMA6NI47 508 aa16.28■□□□□ 0.2
CNOT9-201ENST00000273064 USP17L5A8MUK1 530 aa16.28■□□□□ 0.2
CNOT9-201ENST00000273064 DDAH1O94760 285 aa16.28■□□□□ 0.2
CNOT9-201ENST00000273064 PLCG1P19174 1290 aa16.28■□□□□ 0.2
CNOT9-201ENST00000273064 GYS2P54840 703 aa16.28■□□□□ 0.2
CNOT9-201ENST00000273064 MAP9Q49MG5 647 aa16.28■□□□□ 0.2
CNOT9-201ENST00000273064 CNNM4Q6P4Q7 775 aa16.28■□□□□ 0.2
CNOT9-201ENST00000273064 ENGASEQ8NFI3 743 aa16.28■□□□□ 0.2
CNOT9-201ENST00000273064 PABPC4Q13310 644 aaKnown RBP eCLIP16.28■□□□□ 0.25e-15■□□□□ 9.5
CNOT9-201ENST00000273064 TNIP1Q15025 636 aa16.28■□□□□ 0.2
CNOT9-201ENST00000273064 KCNB2Q92953 911 aa16.28■□□□□ 0.2
CNOT9-201ENST00000273064 TUBGCP2Q9BSJ2 902 aa16.28■□□□□ 0.2
CNOT9-201ENST00000273064 KIAA1024Q9UPX6 916 aa16.28■□□□□ 0.2
CNOT9-201ENST00000273064 UTP14CQ5TAP6 766 aaKnown RBP16.27■□□□□ 0.2
CNOT9-201ENST00000273064 RASGRP2Q7LDG7 609 aa16.27■□□□□ 0.2
CNOT9-201ENST00000273064 SGMS1Q86VZ5 419 aa16.27■□□□□ 0.2
CNOT9-201ENST00000273064 FUCA2Q9BTY2 467 aa16.27■□□□□ 0.2
CNOT9-201ENST00000273064 ALDH8A1Q9H2A2 487 aaPredicted RBP16.27■□□□□ 0.2
CNOT9-201ENST00000273064 GJA3Q9Y6H8 435 aa16.27■□□□□ 0.2
CNOT9-201ENST00000273064 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.27■□□□□ 0.2
CNOT9-201ENST00000273064 ZEB2O60315 1214 aa16.27■□□□□ 0.2
CNOT9-201ENST00000273064 SEPT12Q8IYM1 358 aa16.27■□□□□ 0.2
CNOT9-201ENST00000273064 NSUN4Q96CB9 384 aaKnown RBP16.27■□□□□ 0.2
CNOT9-201ENST00000273064 TIGD1Q96MW7 591 aa16.27■□□□□ 0.2
CNOT9-201ENST00000273064 GSDMAQ96QA5 445 aa16.27■□□□□ 0.2
CNOT9-201ENST00000273064 PCDHA4Q9UN74 947 aa16.27■□□□□ 0.2
CNOT9-201ENST00000273064 THRAP3Q9Y2W1 955 aaKnown RBP16.27■□□□□ 0.2
CNOT9-201ENST00000273064 EPN1Q9Y6I3 576 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms