RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 GRK4P32298 578 aa28.64■■■□□ 2.18
SSBP4-201ENST00000270061 ZNF444Q8N0Y2 327 aaPredicted RBP28.64■■■□□ 2.18
SSBP4-201ENST00000270061 STX6O43752 255 aa28.63■■■□□ 2.17
SSBP4-201ENST00000270061 ERVK-9P63128 1117 aa28.63■■■□□ 2.17
SSBP4-201ENST00000270061 ERVK-24P63145 666 aa28.63■■■□□ 2.17
SSBP4-201ENST00000270061 PDE4BQ07343 736 aa28.63■■■□□ 2.17
SSBP4-201ENST00000270061 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.63■■■□□ 2.17
SSBP4-201ENST00000270061 VCPKMTQ9H867 229 aa28.63■■■□□ 2.17
SSBP4-201ENST00000270061 RLFQ13129 1914 aa28.63■■■□□ 2.17
SSBP4-201ENST00000270061 PDE4DIPQ5VU43 2346 aa28.63■■■□□ 2.17
SSBP4-201ENST00000270061 SH2B2O14492 632 aaPredicted RBP28.62■■■□□ 2.17
SSBP4-201ENST00000270061 PRDM1O75626 825 aa28.62■■■□□ 2.17
SSBP4-201ENST00000270061 NKX2-3Q8TAU0 364 aa28.62■■■□□ 2.17
SSBP4-201ENST00000270061 IGDCC4Q8TDY8 1250 aa28.62■■■□□ 2.17
SSBP4-201ENST00000270061 TMEM106CQ9BVX2 250 aa28.62■■■□□ 2.17
SSBP4-201ENST00000270061 TANGO6Q9C0B7 1094 aa28.62■■■□□ 2.17
SSBP4-201ENST00000270061 INCENPQ9NQS7 918 aa28.62■■■□□ 2.17
SSBP4-201ENST00000270061 GPHNQ9NQX3 736 aaPredicted RBP28.62■■■□□ 2.17
SSBP4-201ENST00000270061 ZSWIM5Q9P217 1185 aa28.62■■■□□ 2.17
SSBP4-201ENST00000270061 PDCP20941 246 aa28.62■■■□□ 2.17
SSBP4-201ENST00000270061 KIAA1755Q5JYT7 1200 aa28.62■■■□□ 2.17
SSBP4-201ENST00000270061 SPICE1Q8N0Z3 855 aa28.62■■■□□ 2.17
SSBP4-201ENST00000270061 SMARCC2Q8TAQ2 1214 aa28.62■■■□□ 2.17
SSBP4-201ENST00000270061 RABGAP1Q9Y3P9 1069 aa28.62■■■□□ 2.17
SSBP4-201ENST00000270061 PARP14Q460N5 1801 aa28.61■■■□□ 2.17
SSBP4-201ENST00000270061 MYCP01106 439 aaPredicted RBP28.61■■■□□ 2.17
SSBP4-201ENST00000270061 IRF5Q13568 498 aa28.61■■■□□ 2.17
SSBP4-201ENST00000270061 POTEEQ6S8J3 1075 aa28.61■■■□□ 2.17
SSBP4-201ENST00000270061 LBX2Q6XYB7 198 aa28.61■■■□□ 2.17
SSBP4-201ENST00000270061 CCAR1Q8IX12 1150 aaKnown RBP28.61■■■□□ 2.17
SSBP4-201ENST00000270061 SLAIN1Q8ND83 568 aa28.61■■■□□ 2.17
SSBP4-201ENST00000270061 KDM4AO75164 1064 aa28.6■■■□□ 2.17
SSBP4-201ENST00000270061 LIFRP42702 1097 aa28.6■■■□□ 2.17
SSBP4-201ENST00000270061 Q3C1V9 767 aa28.6■■■□□ 2.17
SSBP4-201ENST00000270061 BIN2Q9UBW5 565 aaPredicted RBP28.6■■■□□ 2.17
SSBP4-201ENST00000270061 BRPF3Q9ULD4 1205 aa28.6■■■□□ 2.17
SSBP4-201ENST00000270061 PLXNB2O15031 1838 aa28.6■■■□□ 2.17
SSBP4-201ENST00000270061 POTEFA5A3E0 1075 aa28.6■■■□□ 2.17
SSBP4-201ENST00000270061 SPDYE16A6NNV3 312 aaPredicted RBP28.6■■■□□ 2.17
SSBP4-201ENST00000270061 GOLGA6L22H0YM25 854 aa28.6■■■□□ 2.17
SSBP4-201ENST00000270061 ADCY3O60266 1144 aa28.6■■■□□ 2.17
SSBP4-201ENST00000270061 ZSCAN22P10073 491 aaPredicted RBP28.6■■■□□ 2.17
SSBP4-201ENST00000270061 COG2Q14746 738 aa28.6■■■□□ 2.17
SSBP4-201ENST00000270061 SGMS1Q86VZ5 419 aa28.6■■■□□ 2.17
SSBP4-201ENST00000270061 GOPCQ9HD26 462 aa28.6■■■□□ 2.17
SSBP4-201ENST00000270061 HOXC10Q9NYD6 342 aa28.6■■■□□ 2.17
SSBP4-201ENST00000270061 KLF18A0A0U1RQI7 1052 aa28.58■■■□□ 2.17
SSBP4-201ENST00000270061 WDR46O15213 610 aaKnown RBP28.58■■■□□ 2.17
SSBP4-201ENST00000270061 MAPK4P31152 587 aa28.58■■■□□ 2.17
SSBP4-201ENST00000270061 PXYLP1Q8TE99 480 aa28.58■■■□□ 2.17
SSBP4-201ENST00000270061 NT5C2P49902 561 aa28.57■■■□□ 2.16
SSBP4-201ENST00000270061 CCNA1P78396 465 aa28.57■■■□□ 2.16
SSBP4-201ENST00000270061 HMGN5P82970 282 aaKnown RBP28.57■■■□□ 2.16
SSBP4-201ENST00000270061 LARP1BQ659C4 914 aaKnown RBP28.57■■■□□ 2.16
SSBP4-201ENST00000270061 NSUN7Q8NE18 718 aaKnown RBP28.57■■■□□ 2.16
SSBP4-201ENST00000270061 ESR2Q92731 530 aa28.57■■■□□ 2.16
SSBP4-201ENST00000270061 PORCNQ9H237 461 aa28.57■■■□□ 2.16
SSBP4-201ENST00000270061 LY9Q9HBG7 655 aa28.57■■■□□ 2.16
SSBP4-201ENST00000270061 NYAP2Q9P242 653 aa28.57■■■□□ 2.16
SSBP4-201ENST00000270061 RAD21O60216 631 aa28.57■■■□□ 2.16
SSBP4-201ENST00000270061 CNMDO75829 334 aa28.57■■■□□ 2.16
SSBP4-201ENST00000270061 TSPY3P0CV98 308 aa28.57■■■□□ 2.16
SSBP4-201ENST00000270061 TSPY8P0CW00 308 aa28.57■■■□□ 2.16
SSBP4-201ENST00000270061 UBXN2AP68543 259 aa28.57■■■□□ 2.16
SSBP4-201ENST00000270061 GJD2Q9UKL4 321 aa28.57■■■□□ 2.16
SSBP4-201ENST00000270061 MTMR6Q9Y217 621 aa28.57■■■□□ 2.16
SSBP4-201ENST00000270061 DHX16O60231 1041 aaKnown RBP28.56■■■□□ 2.16
SSBP4-201ENST00000270061 FLOT1O75955 427 aa28.56■■■□□ 2.16
SSBP4-201ENST00000270061 CTDNEP1O95476 244 aa28.56■■■□□ 2.16
SSBP4-201ENST00000270061 ELNP15502 786 aa28.56■■■□□ 2.16
SSBP4-201ENST00000270061 CCT2P78371 535 aaKnown RBP28.56■■■□□ 2.16
SSBP4-201ENST00000270061 SART3Q15020 963 aaKnown RBP28.56■■■□□ 2.16
SSBP4-201ENST00000270061 TMEM67Q5HYA8 995 aa28.56■■■□□ 2.16
SSBP4-201ENST00000270061 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.56■■■□□ 2.161e-6■■■□□ 16.2
SSBP4-201ENST00000270061 A0A0G2JMZ2 1700 aa28.56■■■□□ 2.16
SSBP4-201ENST00000270061 IGKV6D-41A0A0C4DH26 115 aa28.55■■■□□ 2.16
SSBP4-201ENST00000270061 ORC4O43929 436 aa28.55■■■□□ 2.16
SSBP4-201ENST00000270061 MTFR1Q15390 333 aa28.55■■■□□ 2.16
SSBP4-201ENST00000270061 RRP12Q5JTH9 1297 aaKnown RBP28.55■■■□□ 2.16
SSBP4-201ENST00000270061 TMTC2Q8N394 836 aa28.55■■■□□ 2.16
SSBP4-201ENST00000270061 CEP95Q96GE4 821 aa28.55■■■□□ 2.16
SSBP4-201ENST00000270061 BTBD7Q9P203 1132 aa28.55■■■□□ 2.16
SSBP4-201ENST00000270061 COL11A1P12107 1806 aaPredicted RBP28.55■■■□□ 2.16
SSBP4-201ENST00000270061 PLIN4Q96Q06 1357 aa28.55■■■□□ 2.16
SSBP4-201ENST00000270061 IFIT3O14879 490 aaKnown RBP28.55■■■□□ 2.16
SSBP4-201ENST00000270061 JAK2O60674 1132 aa28.55■■■□□ 2.16
SSBP4-201ENST00000270061 NEDD1Q8NHV4 660 aa28.55■■■□□ 2.16
SSBP4-201ENST00000270061 TOMM22Q9NS69 142 aa28.55■■■□□ 2.16
SSBP4-201ENST00000270061 NAP1L2Q9ULW6 460 aaPredicted RBP28.55■■■□□ 2.16
SSBP4-201ENST00000270061 GOLGA8BA8MQT2 603 aa28.54■■■□□ 2.16
SSBP4-201ENST00000270061 TFAP4Q01664 338 aa28.54■■■□□ 2.16
SSBP4-201ENST00000270061 FAM47AQ5JRC9 791 aa28.54■■■□□ 2.16
SSBP4-201ENST00000270061 GPR142Q7Z601 462 aa28.54■■■□□ 2.16
SSBP4-201ENST00000270061 SOCS4Q8WXH5 440 aa28.54■■■□□ 2.16
SSBP4-201ENST00000270061 NUDT12Q9BQG2 462 aa28.54■■■□□ 2.16
SSBP4-201ENST00000270061 MTMR4Q9NYA4 1195 aa28.54■■■□□ 2.16
SSBP4-201ENST00000270061 CLIP2Q9UDT6 1046 aa28.54■■■□□ 2.16
SSBP4-201ENST00000270061 F13A1P00488 732 aa28.53■■■□□ 2.16
SSBP4-201ENST00000270061 DSG3P32926 999 aa28.53■■■□□ 2.16
SSBP4-201ENST00000270061 FOXD4L5Q5VV16 416 aaPredicted RBP28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms