RNA–Protein interactions for RNA: ENST00000265334.8

CDKL3-201, Transcript of cyclin dependent kinase like 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDKL3, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-201ENST00000265334 FILIP1Q7Z7B0 1213 aa13.54□□□□□ -0.24
CDKL3-201ENST00000265334 CEP95Q96GE4 821 aa13.54□□□□□ -0.24
CDKL3-201ENST00000265334 PAGE5Q96GU1 130 aa13.54□□□□□ -0.24
CDKL3-201ENST00000265334 MED15Q96RN5 788 aa13.54□□□□□ -0.24
CDKL3-201ENST00000265334 KCND1Q9NSA2 647 aa13.54□□□□□ -0.24
CDKL3-201ENST00000265334 ADAMTSL1Q8N6G6 1762 aa13.54□□□□□ -0.24
CDKL3-201ENST00000265334 IGKV6D-41A0A0C4DH26 115 aa13.54□□□□□ -0.24
CDKL3-201ENST00000265334 VWA3AA6NCI4 1184 aa13.54□□□□□ -0.24
CDKL3-201ENST00000265334 SMC2O95347 1197 aa13.54□□□□□ -0.24
CDKL3-201ENST00000265334 CRKP46108 304 aa13.54□□□□□ -0.24
CDKL3-201ENST00000265334 CCDC148Q8NFR7 591 aa13.54□□□□□ -0.24
CDKL3-201ENST00000265334 MYRIPQ8NFW9 859 aa13.54□□□□□ -0.24
CDKL3-201ENST00000265334 ENOX1Q8TC92 643 aaKnown RBP13.54□□□□□ -0.24
CDKL3-201ENST00000265334 DHX58Q96C10 678 aa13.54□□□□□ -0.24
CDKL3-201ENST00000265334 FANCLQ9NW38 375 aa13.54□□□□□ -0.24
CDKL3-201ENST00000265334 PIM2Q9P1W9 311 aa13.54□□□□□ -0.24
CDKL3-201ENST00000265334 PCDHA6Q9UN73 950 aa13.54□□□□□ -0.24
CDKL3-201ENST00000265334 PCDHA8Q9Y5H6 950 aa13.54□□□□□ -0.24
CDKL3-201ENST00000265334 BRCA1P38398 1863 aaKnown RBP13.53□□□□□ -0.24
CDKL3-201ENST00000265334 UQCRHLA0A096LP55 91 aa13.53□□□□□ -0.24
CDKL3-201ENST00000265334 UQCRHP07919 91 aa13.53□□□□□ -0.24
CDKL3-201ENST00000265334 ZNF18P17022 549 aa13.53□□□□□ -0.24
CDKL3-201ENST00000265334 SCNN1DP51172 638 aa13.53□□□□□ -0.24
CDKL3-201ENST00000265334 DPYDQ12882 1025 aa13.53□□□□□ -0.24
CDKL3-201ENST00000265334 CCDC34Q96HJ3 373 aa13.53□□□□□ -0.24
CDKL3-201ENST00000265334 ZMYND12Q9H0C1 365 aa13.53□□□□□ -0.24
CDKL3-201ENST00000265334 DDX4Q9NQI0 724 aaKnown RBP13.53□□□□□ -0.24
CDKL3-201ENST00000265334 USP40Q9NVE5 1235 aa13.53□□□□□ -0.24
CDKL3-201ENST00000265334 SERPINA10Q9UK55 444 aa13.53□□□□□ -0.24
CDKL3-201ENST00000265334 YDJCA8MPS7 323 aa13.52□□□□□ -0.24
CDKL3-201ENST00000265334 PARP1P09874 1014 aaKnown RBP13.52□□□□□ -0.24
CDKL3-201ENST00000265334 SKILP12757 684 aa13.52□□□□□ -0.24
CDKL3-201ENST00000265334 ERCC5P28715 1186 aaPredicted RBP13.52□□□□□ -0.24
CDKL3-201ENST00000265334 MCM7P33993 719 aa13.52□□□□□ -0.24
CDKL3-201ENST00000265334 FMR1Q06787 632 aaKnown RBP eCLIP13.52□□□□□ -0.24
CDKL3-201ENST00000265334 DHX8Q14562 1220 aaKnown RBP13.52□□□□□ -0.24
CDKL3-201ENST00000265334 CDC42EP5Q6NZY7 148 aa13.52□□□□□ -0.24
CDKL3-201ENST00000265334 DPF2Q92785 391 aa13.52□□□□□ -0.24
CDKL3-201ENST00000265334 DACH1Q9UI36 760 aa13.52□□□□□ -0.24
CDKL3-201ENST00000265334 ATF5Q9Y2D1 282 aaPredicted RBP13.52□□□□□ -0.24
CDKL3-201ENST00000265334 MYO3BQ8WXR4 1341 aa13.52□□□□□ -0.24
CDKL3-201ENST00000265334 CBFA2T2O43439 604 aa13.52□□□□□ -0.25
CDKL3-201ENST00000265334 GOLGA8HP0CJ92 632 aa13.52□□□□□ -0.25
CDKL3-201ENST00000265334 GTF2F1P35269 517 aaKnown RBP eCLIP13.52□□□□□ -0.25
CDKL3-201ENST00000265334 LONP1P36776 959 aaKnown RBP13.52□□□□□ -0.25
CDKL3-201ENST00000265334 ARMCX5Q6P1M9 558 aa13.52□□□□□ -0.25
CDKL3-201ENST00000265334 PDXDC2PQ6P474 469 aa13.52□□□□□ -0.25
CDKL3-201ENST00000265334 RASGRP2Q7LDG7 609 aa13.52□□□□□ -0.25
CDKL3-201ENST00000265334 TMC6Q7Z403 805 aa13.52□□□□□ -0.25
CDKL3-201ENST00000265334 KIAA0825Q8IV33 1275 aa13.52□□□□□ -0.25
CDKL3-201ENST00000265334 RASGRP4Q8TDF6 673 aa13.52□□□□□ -0.25
CDKL3-201ENST00000265334 GSDMAQ96QA5 445 aa13.52□□□□□ -0.25
CDKL3-201ENST00000265334 SGIP1Q9BQI5 828 aa13.52□□□□□ -0.25
CDKL3-201ENST00000265334 PYM1Q9BRP8 204 aaKnown RBP13.52□□□□□ -0.25
CDKL3-201ENST00000265334 MTMR4Q9NYA4 1195 aa13.52□□□□□ -0.25
CDKL3-201ENST00000265334 DYNC1I1O14576 645 aa13.51□□□□□ -0.25
CDKL3-201ENST00000265334 NPM3O75607 178 aaKnown RBP13.51□□□□□ -0.25
CDKL3-201ENST00000265334 UBASH3AP57075 661 aa13.51□□□□□ -0.25
CDKL3-201ENST00000265334 USP17L2Q6R6M4 530 aa13.51□□□□□ -0.25
CDKL3-201ENST00000265334 HEATR3Q7Z4Q2 680 aa13.51□□□□□ -0.25
CDKL3-201ENST00000265334 CCDC150Q8NCX0 1101 aa13.51□□□□□ -0.25
CDKL3-201ENST00000265334 RIOX1Q9H6W3 641 aa13.51□□□□□ -0.25
CDKL3-201ENST00000265334 CCDC194A0A1B0GVG4 234 aa13.51□□□□□ -0.25
CDKL3-201ENST00000265334 SNHG28P0DPA3 235 aa13.51□□□□□ -0.25
CDKL3-201ENST00000265334 CUL4BQ13620 913 aa13.51□□□□□ -0.25
CDKL3-201ENST00000265334 IQUBQ8NA54 791 aa13.51□□□□□ -0.25
CDKL3-201ENST00000265334 CPVLQ9H3G5 476 aa13.51□□□□□ -0.25
CDKL3-201ENST00000265334 INTS13Q9NVM9 706 aa13.51□□□□□ -0.25
CDKL3-201ENST00000265334 SIPA1L1O43166 1804 aa13.51□□□□□ -0.25
CDKL3-201ENST00000265334 AFMP43652 599 aa13.5□□□□□ -0.25
CDKL3-201ENST00000265334 KCNJ6P48051 423 aa13.5□□□□□ -0.25
CDKL3-201ENST00000265334 R3HDM1Q15032 1099 aaKnown RBP13.5□□□□□ -0.25
CDKL3-201ENST00000265334 VSTM4Q8IW00 320 aa13.5□□□□□ -0.25
CDKL3-201ENST00000265334 UPF1Q92900 1129 aaKnown RBP eCLIP13.5□□□□□ -0.25
CDKL3-201ENST00000265334 MTRQ99707 1265 aa13.5□□□□□ -0.25
CDKL3-201ENST00000265334 IDI2Q9BXS1 227 aa13.5□□□□□ -0.25
CDKL3-201ENST00000265334 SWAP70Q9UH65 585 aa13.5□□□□□ -0.25
CDKL3-201ENST00000265334 NFE2L3Q9Y4A8 694 aa13.5□□□□□ -0.25
CDKL3-201ENST00000265334 CD2APQ9Y5K6 639 aa13.5□□□□□ -0.25
CDKL3-201ENST00000265334 MYH4Q9Y623 1939 aa13.5□□□□□ -0.25
CDKL3-201ENST00000265334 FER1L6Q2WGJ9 1857 aa13.5□□□□□ -0.25
CDKL3-201ENST00000265334 COL4A5P29400 1685 aa13.5□□□□□ -0.25
CDKL3-201ENST00000265334 ESYT2A0FGR8 921 aa13.49□□□□□ -0.25
CDKL3-201ENST00000265334 USP17L5A8MUK1 530 aa13.49□□□□□ -0.25
CDKL3-201ENST00000265334 PDHBP11177 359 aa13.49□□□□□ -0.25
CDKL3-201ENST00000265334 AKR1B1P15121 316 aa13.49□□□□□ -0.25
CDKL3-201ENST00000265334 PICALMQ13492 652 aa13.49□□□□□ -0.25
CDKL3-201ENST00000265334 DALRD3Q5D0E6 543 aaKnown RBP13.49□□□□□ -0.25
CDKL3-201ENST00000265334 LARGE2Q8N3Y3 721 aa13.49□□□□□ -0.25
CDKL3-201ENST00000265334 CCDC12Q8WUD4 166 aaPredicted RBP13.49□□□□□ -0.25
CDKL3-201ENST00000265334 RRP36Q96EU6 259 aaKnown RBP13.49□□□□□ -0.25
CDKL3-201ENST00000265334 MTMR7Q9Y216 660 aa13.49□□□□□ -0.25
CDKL3-201ENST00000265334 PPP1R3GB7ZBB8 358 aa13.49□□□□□ -0.25
CDKL3-201ENST00000265334 LAD1O00515 517 aa13.49□□□□□ -0.25
CDKL3-201ENST00000265334 SERPINC1P01008 464 aa13.49□□□□□ -0.25
CDKL3-201ENST00000265334 VIL1P09327 827 aaKnown RBP13.49□□□□□ -0.25
CDKL3-201ENST00000265334 CD44P16070 742 aaKnown RBP13.49□□□□□ -0.25
CDKL3-201ENST00000265334 CASP1P29466 404 aa13.49□□□□□ -0.25
CDKL3-201ENST00000265334 SHMT1P34896 483 aa13.49□□□□□ -0.25
CDKL3-201ENST00000265334 PRPHP41219 470 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms