RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 NOVP48745 357 aa8.49□□□□□ -1.05
DEPDC1B-201ENST00000265036 FCGRTP55899 365 aa8.49□□□□□ -1.05
DEPDC1B-201ENST00000265036 SART3Q15020 963 aaKnown RBP8.49□□□□□ -1.05
DEPDC1B-201ENST00000265036 LBX2Q6XYB7 198 aa8.49□□□□□ -1.05
DEPDC1B-201ENST00000265036 NFXL1Q6ZNB6 911 aa8.49□□□□□ -1.05
DEPDC1B-201ENST00000265036 NCAPG2Q86XI2 1143 aa8.49□□□□□ -1.05
DEPDC1B-201ENST00000265036 STAG2Q8N3U4 1231 aa8.49□□□□□ -1.05
DEPDC1B-201ENST00000265036 NEK1Q96PY6 1258 aa8.49□□□□□ -1.05
DEPDC1B-201ENST00000265036 LARP6Q9BRS8 491 aaKnown RBP8.49□□□□□ -1.05
DEPDC1B-201ENST00000265036 MOV10L1Q9BXT6 1211 aaKnown RBP8.49□□□□□ -1.05
DEPDC1B-201ENST00000265036 USP26Q9BXU7 913 aa8.49□□□□□ -1.05
DEPDC1B-201ENST00000265036 MCM3APO60318 1980 aa8.49□□□□□ -1.05
DEPDC1B-201ENST00000265036 ELNP15502 786 aa8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 FLT3LGP49771 235 aa8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 SNRNP48Q6IEG0 339 aaKnown RBP8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 MICU3Q86XE3 530 aa8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 DGKHQ86XP1 1220 aa8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 CMTR1Q8N1G2 835 aaKnown RBP8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 SH3TC2Q8TF17 1288 aa8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 GMCL1Q96IK5 515 aa8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 SPATC1LQ9H0A9 340 aa8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 LY9Q9HBG7 655 aa8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 HOXC10Q9NYD6 342 aa8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 MORF4L1Q9UBU8 362 aa8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 ZNF214Q9UL59 606 aaPredicted RBP8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 PRR12Q9ULL5 1215 aa8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 RABGAP1Q9Y3P9 1069 aa8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 CTDP1Q9Y5B0 961 aaPredicted RBP8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 ZNFX1Q9P2E3 1918 aaKnown RBP8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 ERCC3P19447 782 aa8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 FGD1P98174 961 aa8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 ZNF543Q08ER8 600 aa8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 NOM1Q5C9Z4 860 aaKnown RBP8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 GPR142Q7Z601 462 aa8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 PRPF38AQ8NAV1 312 aaKnown RBP8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 VAT1LQ9HCJ6 419 aa8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 RIPK3Q9Y572 518 aa8.48□□□□□ -1.05
DEPDC1B-201ENST00000265036 SH2B2O14492 632 aaPredicted RBP8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 PPFIA3O75145 1194 aa8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 CYP2B6P20813 491 aa8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 PPP4R3BQ5MIZ7 849 aa8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 NOL8Q76FK4 1167 aaKnown RBP8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 HOMER1Q86YM7 354 aa8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 IGDCC4Q8TDY8 1250 aa8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 DCAF4Q8WV16 495 aa8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 AGBL1Q96MI9 1066 aa8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 TTC14Q96N46 770 aa8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 FEM1BQ9UK73 627 aa8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 PDE4DIPQ5VU43 2346 aa8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 DTNBO60941 627 aa8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 PGK2P07205 417 aa8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 PARP1P09874 1014 aaKnown RBP8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 USH1GQ495M9 461 aa8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 SYDE2Q5VT97 1194 aa8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 ZNF654Q8IZM8 581 aa8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 CCDC82Q8N4S0 544 aa8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 REPS2Q8NFH8 660 aa8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 RAET1EQ8TD07 263 aa8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 COA7Q96BR5 231 aa8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 SLC38A10Q9HBR0 1119 aa8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 SRRDQ9UH36 339 aa8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 PTPN22Q9Y2R2 807 aa8.47□□□□□ -1.05
DEPDC1B-201ENST00000265036 CCDC69A6NI79 296 aa8.46□□□□□ -1.05
DEPDC1B-201ENST00000265036 SNHG28P0DPA3 235 aa8.46□□□□□ -1.05
DEPDC1B-201ENST00000265036 ALAS1P13196 640 aa8.46□□□□□ -1.05
DEPDC1B-201ENST00000265036 STAT3P40763 770 aa8.46□□□□□ -1.05
DEPDC1B-201ENST00000265036 CCNA1P78396 465 aa8.46□□□□□ -1.05
DEPDC1B-201ENST00000265036 SLC9C1Q4G0N8 1177 aa8.46□□□□□ -1.05
DEPDC1B-201ENST00000265036 BLOC1S2Q6QNY1 142 aa8.46□□□□□ -1.05
DEPDC1B-201ENST00000265036 NBPF11Q86T75 865 aa8.46□□□□□ -1.05
DEPDC1B-201ENST00000265036 BRF1Q92994 677 aa8.46□□□□□ -1.05
DEPDC1B-201ENST00000265036 TEX13BQ9BXU2 312 aa8.46□□□□□ -1.05
DEPDC1B-201ENST00000265036 HPS5Q9UPZ3 1129 aa8.46□□□□□ -1.05
DEPDC1B-201ENST00000265036 DDX49Q9Y6V7 483 aaKnown RBP8.46□□□□□ -1.05
DEPDC1B-201ENST00000265036 IVNS1ABPQ9Y6Y0 642 aa8.46□□□□□ -1.05
DEPDC1B-201ENST00000265036 PLXNA1Q9UIW2 1896 aa8.46□□□□□ -1.05
DEPDC1B-201ENST00000265036 hCG_1642624A0A1W2PR95 340 aa8.46□□□□□ -1.06
DEPDC1B-201ENST00000265036 PLEKHA8P1O95397 391 aa8.46□□□□□ -1.06
DEPDC1B-201ENST00000265036 APOBRQ0VD83 1088 aa8.46□□□□□ -1.06
DEPDC1B-201ENST00000265036 TROAPQ12815 778 aa8.46□□□□□ -1.06
DEPDC1B-201ENST00000265036 TRIM32Q13049 653 aa8.46□□□□□ -1.06
DEPDC1B-201ENST00000265036 KRT32Q14532 448 aa8.46□□□□□ -1.06
DEPDC1B-201ENST00000265036 CCL14Q16627 93 aa8.46□□□□□ -1.06
DEPDC1B-201ENST00000265036 SLC35G1Q2M3R5 365 aa8.46□□□□□ -1.06
DEPDC1B-201ENST00000265036 FBXO46Q6PJ61 603 aaPredicted RBP8.46□□□□□ -1.06
DEPDC1B-201ENST00000265036 Q6ZUG5 572 aa8.46□□□□□ -1.06
DEPDC1B-201ENST00000265036 DHX32Q7L7V1 743 aaKnown RBP8.46□□□□□ -1.06
DEPDC1B-201ENST00000265036 PLEKHH3Q7Z736 793 aa8.46□□□□□ -1.06
DEPDC1B-201ENST00000265036 CATIPQ7Z7H3 387 aa8.46□□□□□ -1.06
DEPDC1B-201ENST00000265036 MB21D1Q8N884 522 aa8.46□□□□□ -1.06
DEPDC1B-201ENST00000265036 CHURC1Q8WUH1 139 aa8.46□□□□□ -1.06
DEPDC1B-201ENST00000265036 ABHD8Q96I13 439 aa8.46□□□□□ -1.06
DEPDC1B-201ENST00000265036 BIN2Q9UBW5 565 aaPredicted RBP8.46□□□□□ -1.06
DEPDC1B-201ENST00000265036 MAD2L2Q9UI95 211 aa8.46□□□□□ -1.06
DEPDC1B-201ENST00000265036 SYNPO2Q9UMS6 1093 aa8.46□□□□□ -1.06
DEPDC1B-201ENST00000265036 ADAMTS5Q9UNA0 930 aa8.46□□□□□ -1.06
DEPDC1B-201ENST00000265036 RANBP2P49792 3224 aaKnown RBP8.46□□□□□ -1.06
DEPDC1B-201ENST00000265036 ZNF536O15090 1300 aa8.46□□□□□ -1.06
DEPDC1B-201ENST00000265036 KLF18A0A0U1RQI7 1052 aa8.45□□□□□ -1.06
DEPDC1B-201ENST00000265036 CCDC85CA6NKD9 419 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms