RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 VPS53Q5VIR6 699 aa8.26□□□□□ -1.09
SMARCE1-201ENST00000264640 LRSAM1Q6UWE0 723 aa8.26□□□□□ -1.09
SMARCE1-201ENST00000264640 CWC27Q6UX04 472 aaKnown RBP8.26□□□□□ -1.09
SMARCE1-201ENST00000264640 NECAB3Q96P71 396 aaPredicted RBP8.26□□□□□ -1.09
SMARCE1-201ENST00000264640 PPP1R9BQ96SB3 815 aa8.26□□□□□ -1.09
SMARCE1-201ENST00000264640 NUDT12Q9BQG2 462 aa8.26□□□□□ -1.09
SMARCE1-201ENST00000264640 MRIQ9BWK5 157 aa8.26□□□□□ -1.09
SMARCE1-201ENST00000264640 HMG20BQ9P0W2 317 aa8.26□□□□□ -1.09
SMARCE1-201ENST00000264640 MROH5Q6ZUA9 1318 aa8.26□□□□□ -1.09
SMARCE1-201ENST00000264640 DDTLA6NHG4 134 aaPredicted RBP8.25□□□□□ -1.09
SMARCE1-201ENST00000264640 ESPNB1AK53 854 aa8.25□□□□□ -1.09
SMARCE1-201ENST00000264640 CTNND1O60716 968 aaKnown RBP8.25□□□□□ -1.09
SMARCE1-201ENST00000264640 SPP2Q13103 211 aa8.25□□□□□ -1.09
SMARCE1-201ENST00000264640 PICALMQ13492 652 aa8.25□□□□□ -1.09
SMARCE1-201ENST00000264640 LRRFIP1Q32MZ4 808 aaKnown RBP8.25□□□□□ -1.09
SMARCE1-201ENST00000264640 SH3RF1Q7Z6J0 888 aa8.25□□□□□ -1.09
SMARCE1-201ENST00000264640 VGLL2Q8N8G2 317 aa8.25□□□□□ -1.09
SMARCE1-201ENST00000264640 FAM184AQ8NB25 1140 aa8.25□□□□□ -1.09
SMARCE1-201ENST00000264640 PROCA1Q8NCQ7 364 aaPredicted RBP8.25□□□□□ -1.09
SMARCE1-201ENST00000264640 SOCS4Q8WXH5 440 aa8.25□□□□□ -1.09
SMARCE1-201ENST00000264640 KCNB2Q92953 911 aa8.25□□□□□ -1.09
SMARCE1-201ENST00000264640 SUCLG2Q96I99 432 aa8.25□□□□□ -1.09
SMARCE1-201ENST00000264640 UHRF1Q96T88 793 aaPredicted RBP8.25□□□□□ -1.09
SMARCE1-201ENST00000264640 TXNRD2Q9NNW7 524 aa8.25□□□□□ -1.09
SMARCE1-201ENST00000264640 PDRG1Q9NUG6 133 aa8.25□□□□□ -1.09
SMARCE1-201ENST00000264640 PALD1Q9ULE6 856 aa8.25□□□□□ -1.09
SMARCE1-201ENST00000264640 SUGT1Q9Y2Z0 365 aa8.25□□□□□ -1.09
SMARCE1-201ENST00000264640 CCDC171Q6TFL3 1326 aa8.25□□□□□ -1.09
SMARCE1-201ENST00000264640 CHD9Q3L8U1 2897 aa8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 MAP4K4O95819 1239 aaPredicted RBP8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 ZSCAN22P10073 491 aaPredicted RBP8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 CASTP20810 708 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 MSNP26038 577 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 CNGA1P29973 690 aa8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 TRIM60Q495X7 471 aa8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 TMEM87AQ8NBN3 555 aa8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 KLHDC4Q8TBB5 520 aa8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 RNPC3Q96LT9 517 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 ASB2Q96Q27 587 aa8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 FSD1Q9BTV5 496 aa8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 PANK2Q9BZ23 570 aa8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 UPF3BQ9BZI7 483 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 PORCNQ9H237 461 aa8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 ALDH8A1Q9H2A2 487 aaPredicted RBP8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 TSPY26PQ9H489 355 aa8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 BICC1Q9H694 974 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 COPRSQ9NQ92 184 aa8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 DDX4Q9NQI0 724 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 NPDC1Q9NQX5 325 aaPredicted RBP8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 THEGQ9P2T0 379 aa8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 MORF4L1Q9UBU8 362 aa8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 ZDHHC9Q9Y397 364 aa8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 NDUFB9Q9Y6M9 179 aa8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 MUC6Q6W4X9 2439 aa8.24□□□□□ -1.09
SMARCE1-201ENST00000264640 PIEZO1Q92508 2521 aa8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 STX6O43752 255 aa8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 PDE8BO95263 885 aa8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 XRCC5P13010 732 aaKnown RBP8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 DNAJB2P25686 324 aa8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 MCM5P33992 734 aa8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 RGS2P41220 211 aa8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 EPHB4P54760 987 aa8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 AK2P54819 239 aa8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 IRX3P78415 501 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 CCDC85BQ15834 202 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 UVSSAQ2YD98 709 aa8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 GJC2Q5T442 439 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 ANO1Q5XXA6 986 aa8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 NOL8Q76FK4 1167 aaKnown RBP8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 RUFY3Q7L099 469 aa8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 GAS2L3Q86XJ1 694 aa8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 ZNF280CQ8ND82 737 aa8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 WDR66Q8TBY9 1149 aa8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 KAZALD1Q96I82 304 aa8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 JAKMIP1Q96N16 626 aaKnown RBP8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 TTC14Q96N46 770 aa8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 APBA2Q99767 749 aa8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 PAGR1Q9BTK6 254 aa8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 PDLIM7Q9NR12 457 aa8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 SNRKQ9NRH2 765 aa8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 FLRT1Q9NZU1 646 aa8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 DDX20Q9UHI6 824 aaKnown RBP8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 KIF3AQ9Y496 699 aa8.23□□□□□ -1.09
SMARCE1-201ENST00000264640 XIRP2A4UGR9 3374 aa8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 SMCHD1A6NHR9 2005 aa8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 TRIM43BA6NCK2 446 aa8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 DNM1LO00429 736 aa8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 ENTPD3O75355 529 aa8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 LDHBP07195 334 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 ATP5JP18859 108 aa8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 ITGB8P26012 769 aa8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 UBE2HP62256 183 aa8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 PABPC4Q13310 644 aaKnown RBP eCLIP8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 MTMR2Q13614 643 aa8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 RRP1BQ14684 758 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 MORN1Q5T089 497 aa8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 CCDC183Q5T5S1 534 aa8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 CREB3L3Q68CJ9 461 aa8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 BLOC1S2Q6QNY1 142 aa8.22□□□□□ -1.09
SMARCE1-201ENST00000264640 GPR142Q7Z601 462 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms