RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 SNRNP48Q6IEG0 339 aaKnown RBP10.74□□□□□ -0.69
LCN1-201ENST00000263598 CTR9Q6PD62 1173 aa10.74□□□□□ -0.69
LCN1-201ENST00000263598 REPS2Q8NFH8 660 aa10.74□□□□□ -0.69
LCN1-201ENST00000263598 LENG1Q96BZ8 264 aaPredicted RBP10.74□□□□□ -0.69
LCN1-201ENST00000263598 GLT1D1Q96MS3 346 aa10.74□□□□□ -0.69
LCN1-201ENST00000263598 MKNK2Q9HBH9 465 aa10.74□□□□□ -0.69
LCN1-201ENST00000263598 SPC25Q9HBM1 224 aa10.74□□□□□ -0.69
LCN1-201ENST00000263598 ZHX1Q9UKY1 873 aaPredicted RBP10.74□□□□□ -0.69
LCN1-201ENST00000263598 SYNRGQ9UMZ2 1314 aa10.74□□□□□ -0.69
LCN1-201ENST00000263598 SMIM22K7EJ46 135 aa10.73□□□□□ -0.69
LCN1-201ENST00000263598 ZBED4O75132 1171 aa10.73□□□□□ -0.69
LCN1-201ENST00000263598 DUSP11O75319 330 aaKnown RBP10.73□□□□□ -0.69
LCN1-201ENST00000263598 SLC4A3P48751 1232 aa10.73□□□□□ -0.69
LCN1-201ENST00000263598 GRIN2CQ14957 1233 aa10.73□□□□□ -0.69
LCN1-201ENST00000263598 KCNA10Q16322 511 aa10.73□□□□□ -0.69
LCN1-201ENST00000263598 MAMDC4Q6UXC1 1216 aa10.73□□□□□ -0.69
LCN1-201ENST00000263598 ZNF467Q7Z7K2 595 aaPredicted RBP10.73□□□□□ -0.69
LCN1-201ENST00000263598 PRPF38AQ8NAV1 312 aaKnown RBP10.73□□□□□ -0.69
LCN1-201ENST00000263598 PCSK9Q8NBP7 692 aaKnown RBP10.73□□□□□ -0.69
LCN1-201ENST00000263598 KLHDC9Q8NEP7 349 aa10.73□□□□□ -0.69
LCN1-201ENST00000263598 CHMP4BQ9H444 224 aaKnown RBP10.73□□□□□ -0.69
LCN1-201ENST00000263598 ZNF576Q9H609 170 aa10.73□□□□□ -0.69
LCN1-201ENST00000263598 PRDM6Q9NQX0 595 aa10.73□□□□□ -0.69
LCN1-201ENST00000263598 DDX19BQ9UMR2 479 aa10.73□□□□□ -0.69
LCN1-201ENST00000263598 ELP1O95163 1332 aa10.73□□□□□ -0.69
LCN1-201ENST00000263598 ZBED9Q6R2W3 1325 aa10.73□□□□□ -0.69
LCN1-201ENST00000263598 MYH8P13535 1937 aa10.72□□□□□ -0.69
LCN1-201ENST00000263598 DNAJC25-GNG10A0A024R161 153 aa10.72□□□□□ -0.69
LCN1-201ENST00000263598 F5H6K3 240 aa10.72□□□□□ -0.69
LCN1-201ENST00000263598 ATP2A1O14983 1001 aa10.72□□□□□ -0.69
LCN1-201ENST00000263598 SNAI1O95863 264 aaPredicted RBP10.72□□□□□ -0.69
LCN1-201ENST00000263598 C6orf222P0C671 652 aaPredicted RBP10.72□□□□□ -0.69
LCN1-201ENST00000263598 CST5P28325 142 aaPredicted RBP10.72□□□□□ -0.69
LCN1-201ENST00000263598 KLRC3Q07444 240 aa10.72□□□□□ -0.69
LCN1-201ENST00000263598 PPIGQ13427 754 aaKnown RBP eCLIP10.72□□□□□ -0.69
LCN1-201ENST00000263598 ACVR2BQ13705 512 aa10.72□□□□□ -0.69
LCN1-201ENST00000263598 TJAP1Q5JTD0 557 aa10.72□□□□□ -0.69
LCN1-201ENST00000263598 CCSAPQ6IQ19 270 aaPredicted RBP10.72□□□□□ -0.69
LCN1-201ENST00000263598 MFSD5Q6N075 450 aa10.72□□□□□ -0.69
LCN1-201ENST00000263598 SIRT2Q8IXJ6 389 aa10.72□□□□□ -0.69
LCN1-201ENST00000263598 CPXCR1Q8N123 301 aa10.72□□□□□ -0.69
LCN1-201ENST00000263598 ANKRD35Q8N283 1001 aa10.72□□□□□ -0.69
LCN1-201ENST00000263598 TMEM199Q8N511 208 aa10.72□□□□□ -0.69
LCN1-201ENST00000263598 VTI1AQ96AJ9 217 aa10.72□□□□□ -0.69
LCN1-201ENST00000263598 TIFAQ96CG3 184 aa10.72□□□□□ -0.69
LCN1-201ENST00000263598 NUP88Q99567 741 aaPredicted RBP10.72□□□□□ -0.69
LCN1-201ENST00000263598 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.72□□□□□ -0.69
LCN1-201ENST00000263598 PUS7LQ9H0K6 701 aaKnown RBP10.72□□□□□ -0.69
LCN1-201ENST00000263598 ABHD16BQ9H3Z7 469 aa10.72□□□□□ -0.69
LCN1-201ENST00000263598 ZNF287Q9HBT7 754 aa10.72□□□□□ -0.69
LCN1-201ENST00000263598 NYAP2Q9P242 653 aa10.72□□□□□ -0.69
LCN1-201ENST00000263598 FBXO40Q9UH90 709 aa10.72□□□□□ -0.69
LCN1-201ENST00000263598 RIPK3Q9Y572 518 aa10.72□□□□□ -0.69
LCN1-201ENST00000263598 A0A0U1RQG5 324 aaPredicted RBP10.71□□□□□ -0.69
LCN1-201ENST00000263598 TLR3O15455 904 aaKnown RBP10.71□□□□□ -0.69
LCN1-201ENST00000263598 NDUFB10O96000 172 aa10.71□□□□□ -0.69
LCN1-201ENST00000263598 CHGBP05060 677 aa10.71□□□□□ -0.69
LCN1-201ENST00000263598 ASGR1P07306 291 aa10.71□□□□□ -0.69
LCN1-201ENST00000263598 COL11A1P12107 1806 aaPredicted RBP10.71□□□□□ -0.69
LCN1-201ENST00000263598 RASA1P20936 1047 aa10.71□□□□□ -0.69
LCN1-201ENST00000263598 PARP14Q460N5 1801 aa10.71□□□□□ -0.69
LCN1-201ENST00000263598 SBK1Q52WX2 424 aa10.71□□□□□ -0.69
LCN1-201ENST00000263598 GIMAP6Q6P9H5 292 aa10.71□□□□□ -0.69
LCN1-201ENST00000263598 CCDC129Q6ZRS4 1044 aa10.71□□□□□ -0.69
LCN1-201ENST00000263598 KIFC2Q96AC6 838 aa10.71□□□□□ -0.69
LCN1-201ENST00000263598 GAS2L1Q99501 681 aaPredicted RBP10.71□□□□□ -0.69
LCN1-201ENST00000263598 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.71□□□□□ -0.69
LCN1-201ENST00000263598 ZBTB40Q9NUA8 1239 aa10.71□□□□□ -0.69
LCN1-201ENST00000263598 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.71□□□□□ -0.69
LCN1-201ENST00000263598 CLIP2Q9UDT6 1046 aa10.71□□□□□ -0.69
LCN1-201ENST00000263598 TBX21Q9UL17 535 aa10.71□□□□□ -0.69
LCN1-201ENST00000263598 PRUNE2Q8WUY3 3088 aa10.71□□□□□ -0.7
LCN1-201ENST00000263598 MYADML2A6NDP7 307 aa10.7□□□□□ -0.7
LCN1-201ENST00000263598 MINDY4BA8MYZ0 360 aa10.7□□□□□ -0.7
LCN1-201ENST00000263598 ARVCFO00192 962 aa10.7□□□□□ -0.7
LCN1-201ENST00000263598 CDK7P50613 346 aa10.7□□□□□ -0.7
LCN1-201ENST00000263598 GJA9P57773 515 aa10.7□□□□□ -0.7
LCN1-201ENST00000263598 CCDC144BQ3MJ40 725 aa10.7□□□□□ -0.7
LCN1-201ENST00000263598 GNASQ5JWF2 1037 aa10.7□□□□□ -0.7
LCN1-201ENST00000263598 TMEM240Q5SV17 173 aa10.7□□□□□ -0.7
LCN1-201ENST00000263598 PSRC1Q6PGN9 363 aaPredicted RBP10.7□□□□□ -0.7
LCN1-201ENST00000263598 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.7□□□□□ -0.7
LCN1-201ENST00000263598 ZNF444Q8N0Y2 327 aaPredicted RBP10.7□□□□□ -0.7
LCN1-201ENST00000263598 STK11IPQ8N1F8 1099 aa10.7□□□□□ -0.7
LCN1-201ENST00000263598 CHST13Q8NET6 341 aa10.7□□□□□ -0.7
LCN1-201ENST00000263598 STRBPQ96SI9 672 aaKnown RBP10.7□□□□□ -0.7
LCN1-201ENST00000263598 LRRCC1Q9C099 1032 aa10.7□□□□□ -0.7
LCN1-201ENST00000263598 UPF3AQ9H1J1 476 aaKnown RBP10.7□□□□□ -0.7
LCN1-201ENST00000263598 SLC38A10Q9HBR0 1119 aa10.7□□□□□ -0.7
LCN1-201ENST00000263598 RAVER2Q9HCJ3 691 aaKnown RBP10.7□□□□□ -0.7
LCN1-201ENST00000263598 FEM1BQ9UK73 627 aa10.7□□□□□ -0.7
LCN1-201ENST00000263598 SYNPO2Q9UMS6 1093 aa10.7□□□□□ -0.7
LCN1-201ENST00000263598 COG6Q9Y2V7 657 aa10.7□□□□□ -0.7
LCN1-201ENST00000263598 SPTBN5Q9NRC6 3674 aaKnown RBP10.7□□□□□ -0.7
LCN1-201ENST00000263598 ZNFX1Q9P2E3 1918 aaKnown RBP10.7□□□□□ -0.7
LCN1-201ENST00000263598 BAZ2AQ9UIF9 1905 aaKnown RBP10.7□□□□□ -0.7
LCN1-201ENST00000263598 PLXNA1Q9UIW2 1896 aa10.7□□□□□ -0.7
LCN1-201ENST00000263598 GSG1L2A8MUP6 293 aa10.69□□□□□ -0.7
LCN1-201ENST00000263598 FDX1P10109 184 aa10.69□□□□□ -0.7
LCN1-201ENST00000263598 CSF2RAP15509 400 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms