RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 FAM81AQ8TBF8 368 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 SLC4A9Q96Q91 983 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 OSBPL1AQ9BXW6 950 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 FANCLQ9NW38 375 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 NOP53Q9NZM5 478 aaKnown RBP9.3□□□□□ -0.92
LDB3-201ENST00000263066 SAP30BPQ9UHR5 308 aaKnown RBP9.3□□□□□ -0.92
LDB3-201ENST00000263066 L1RE1Q9UN81 338 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 TUBGCP6Q96RT7 1819 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 EYA2O00167 538 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 CUTAO60888 179 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 GLRX3O76003 335 aaKnown RBP9.3□□□□□ -0.92
LDB3-201ENST00000263066 PYGBP11216 843 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 PSMA5P28066 241 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 SMTNP53814 917 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 CTSWP56202 376 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 ICA1Q05084 483 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 HLTFQ14527 1009 aaKnown RBP eCLIP9.3□□□□□ -0.92
LDB3-201ENST00000263066 CCDC93Q567U6 631 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 CACNA2D3Q8IZS8 1091 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 OGFOD1Q8N543 542 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.3□□□□□ -0.92
LDB3-201ENST00000263066 FAM114A2Q9NRY5 505 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 ZNF232Q9UNY5 417 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 LTN1O94822 1766 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 LRRIQ3A6PVS8 624 aaPredicted RBP9.3□□□□□ -0.92
LDB3-201ENST00000263066 HNRNPCP07910 306 aaKnown RBP eCLIP9.3□□□□□ -0.92
LDB3-201ENST00000263066 LACTBP83111 547 aaPredicted RBP9.3□□□□□ -0.92
LDB3-201ENST00000263066 PARP10Q53GL7 1025 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 CCDC92Q53HC0 331 aaPredicted RBP9.3□□□□□ -0.92
LDB3-201ENST00000263066 COL23A1Q86Y22 540 aaPredicted RBP9.3□□□□□ -0.92
LDB3-201ENST00000263066 ANKS4BQ8N8V4 417 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 IFT81Q8WYA0 676 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 ARHGAP45Q92619 1136 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 CCDC113Q9H0I3 377 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 VCXQ9H320 206 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 DCTPP1Q9H773 170 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 ATP6V0A4Q9HBG4 840 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 TRPC6Q9Y210 931 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 CCDC160A6NGH7 325 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 SMIM23A6NLE4 172 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 EIF6P56537 245 aaKnown RBP9.29□□□□□ -0.92
LDB3-201ENST00000263066 MAP3K9P80192 1104 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 MAP3K12Q12852 859 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 CCDC6Q16204 474 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 IMMTQ16891 758 aaKnown RBP9.29□□□□□ -0.92
LDB3-201ENST00000263066 SARM1Q6SZW1 724 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 MAGEB6Q8N7X4 407 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 STAMBPL1Q96FJ0 436 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 FTOQ9C0B1 505 aaKnown RBP eCLIP9.29□□□□□ -0.92
LDB3-201ENST00000263066 UBAP1Q9NZ09 502 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 LRRC37A3O60309 1634 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 A6NNZ2 444 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 IL15P40933 162 aaPredicted RBP9.29□□□□□ -0.92
LDB3-201ENST00000263066 PRPF4BQ13523 1007 aaKnown RBP9.29□□□□□ -0.92
LDB3-201ENST00000263066 TUBB8Q3ZCM7 444 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 NCAPH2Q6IBW4 605 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 ZBTB38Q8NAP3 1195 aaPredicted RBP9.29□□□□□ -0.92
LDB3-201ENST00000263066 FBF1Q8TES7 1133 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 TEKT4Q8WW24 435 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 XAGE2Q96GT9 111 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 RBM17Q96I25 401 aaKnown RBP9.29□□□□□ -0.92
LDB3-201ENST00000263066 PXDNQ92626 1479 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 PHRF1Q9P1Y6 1649 aaKnown RBP9.29□□□□□ -0.92
LDB3-201ENST00000263066 ZYXQ15942 572 aaKnown RBP9.29□□□□□ -0.92
LDB3-201ENST00000263066 EAF2Q96CJ1 260 aaPredicted RBP9.29□□□□□ -0.92
LDB3-201ENST00000263066 HOOK2Q96ED9 719 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 GBP5Q96PP8 586 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 NAPBQ9H115 298 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 ACTR5Q9H9F9 607 aaPredicted RBP9.29□□□□□ -0.92
LDB3-201ENST00000263066 TMOD2Q9NZR1 351 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 MYO1AQ9UBC5 1043 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 GGA1Q9UJY5 639 aa9.29□□□□□ -0.92
LDB3-201ENST00000263066 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.29□□□□□ -0.92
LDB3-201ENST00000263066 RBM47A0AV96 593 aaKnown RBP9.28□□□□□ -0.92
LDB3-201ENST00000263066 MARCH6O60337 910 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 EVI5O60447 810 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 PSMC4P43686 418 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 MRPL12P52815 198 aaKnown RBP9.28□□□□□ -0.92
LDB3-201ENST00000263066 ATP11AP98196 1134 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 BRF1Q92994 677 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 MKNK2Q9HBH9 465 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 VAT1LQ9HCJ6 419 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 HOMER3Q9NSC5 361 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 PAIP2BQ9ULR5 123 aaKnown RBP9.28□□□□□ -0.92
LDB3-201ENST00000263066 ERICH2A1L162 156 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 RASSF10A6NK89 507 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 GOLGA8KD6RF30 607 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 BACH1O14867 736 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 PARP1P09874 1014 aaKnown RBP9.28□□□□□ -0.92
LDB3-201ENST00000263066 CHMLP26374 656 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 ZAP70P43403 619 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 RAB27AP51159 221 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 MRPS25P82663 173 aaKnown RBP9.28□□□□□ -0.92
LDB3-201ENST00000263066 GUCY1A3Q02108 690 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 CHRNDQ07001 517 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 TMED1Q13445 227 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 SPECC1LQ69YQ0 1117 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 BARGINQ6ZT62 677 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 SLC35F6Q8N357 371 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 PHACTR1Q9C0D0 580 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms