RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 FAM102BQ5T8I3 360 aa15.5■□□□□ 0.07
CDH1-201ENST00000261769 HOXC10Q9NYD6 342 aa15.5■□□□□ 0.07
CDH1-201ENST00000261769 WRNIP1Q96S55 665 aa15.5■□□□□ 0.07
CDH1-201ENST00000261769 SKILP12757 684 aa15.5■□□□□ 0.07
CDH1-201ENST00000261769 PRDX5P30044 214 aa15.5■□□□□ 0.07
CDH1-201ENST00000261769 TFDP1Q14186 410 aa15.5■□□□□ 0.07
CDH1-201ENST00000261769 GPBP1Q86WP2 473 aa15.5■□□□□ 0.07
CDH1-201ENST00000261769 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.5■□□□□ 0.07
CDH1-201ENST00000261769 DYDC1Q8WWB3 177 aa15.5■□□□□ 0.07
CDH1-201ENST00000261769 A0A0G2JLW4 131 aa15.49■□□□□ 0.07
CDH1-201ENST00000261769 FSD2A1L4K1 749 aa15.49■□□□□ 0.07
CDH1-201ENST00000261769 FMNL1O95466 1100 aaPredicted RBP15.49■□□□□ 0.07
CDH1-201ENST00000261769 GH2P01242 217 aa15.49■□□□□ 0.07
CDH1-201ENST00000261769 TRIM14Q14142 442 aa15.49■□□□□ 0.07
CDH1-201ENST00000261769 TSNARE1Q96NA8 513 aa15.49■□□□□ 0.07
CDH1-201ENST00000261769 STRBPQ96SI9 672 aaKnown RBP15.49■□□□□ 0.07
CDH1-201ENST00000261769 CCDC113Q9H0I3 377 aa15.49■□□□□ 0.07
CDH1-201ENST00000261769 USP17L5A8MUK1 530 aa15.49■□□□□ 0.07
CDH1-201ENST00000261769 RAD51AP2Q09MP3 1159 aa15.49■□□□□ 0.07
CDH1-201ENST00000261769 CDC37L1Q7L3B6 337 aa15.49■□□□□ 0.07
CDH1-201ENST00000261769 ATP6V0A2Q9Y487 856 aa15.49■□□□□ 0.07
CDH1-201ENST00000261769 IKBKGQ9Y6K9 419 aa15.49■□□□□ 0.07
CDH1-201ENST00000261769 LAD1O00515 517 aa15.49■□□□□ 0.07
CDH1-201ENST00000261769 TNFAIP3P21580 790 aa15.49■□□□□ 0.07
CDH1-201ENST00000261769 TECP42680 631 aa15.49■□□□□ 0.07
CDH1-201ENST00000261769 POLGP54098 1239 aaPredicted RBP15.49■□□□□ 0.07
CDH1-201ENST00000261769 PLCB3Q01970 1234 aa15.49■□□□□ 0.07
CDH1-201ENST00000261769 POSTNQ15063 836 aa15.49■□□□□ 0.07
CDH1-201ENST00000261769 PPP2R5AQ15172 486 aa15.49■□□□□ 0.07
CDH1-201ENST00000261769 DYNLL2Q96FJ2 89 aa15.49■□□□□ 0.07
CDH1-201ENST00000261769 ZHX1Q9UKY1 873 aaPredicted RBP15.49■□□□□ 0.07
CDH1-201ENST00000261769 COL4A3BPQ9Y5P4 624 aa15.49■□□□□ 0.07
CDH1-201ENST00000261769 NRKQ7Z2Y5 1582 aa15.49■□□□□ 0.07
CDH1-201ENST00000261769 PRPF6O94906 941 aaKnown RBP15.49■□□□□ 0.07
CDH1-201ENST00000261769 GJC1P36383 396 aa15.49■□□□□ 0.07
CDH1-201ENST00000261769 NKX1-1Q15270 411 aaPredicted RBP15.49■□□□□ 0.07
CDH1-201ENST00000261769 LINC00116Q8NCU8 138 aa15.49■□□□□ 0.07
CDH1-201ENST00000261769 C16orf45Q96MC5 204 aaPredicted RBP15.49■□□□□ 0.07
CDH1-201ENST00000261769 FAM193BQ96PV7 902 aaPredicted RBP15.49■□□□□ 0.07
CDH1-201ENST00000261769 CAMTA2O94983 1202 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 TUBB4AP04350 444 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 KRT19P08727 400 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 YARSP54577 528 aaKnown RBP15.48■□□□□ 0.07
CDH1-201ENST00000261769 LRCH2Q5VUJ6 765 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 RNF169Q8NCN4 708 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 PLA2G12BQ9BX93 195 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 IFNKQ9P0W0 207 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 BTBD18B2RXH4 712 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 LIG4P49917 911 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 MKRN3Q13064 507 aaKnown RBP15.48■□□□□ 0.07
CDH1-201ENST00000261769 LIN9Q5TKA1 542 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 ZNF34Q8IZ26 560 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 RASAL2Q9UJF2 1139 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 TPCN1Q9ULQ1 816 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 RFX1P22670 979 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 CCND2P30279 289 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 LIFRP42702 1097 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 ZNF710Q8N1W2 664 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 RETREG2Q8NC44 543 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 BBXQ8WY36 941 aaPredicted RBP15.48■□□□□ 0.07
CDH1-201ENST00000261769 CLSTN2Q9H4D0 955 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 MAPK8IP1Q9UQF2 711 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 ZHX2Q9Y6X8 837 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 SPATA31D1Q6ZQQ2 1576 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 GNA14O95837 355 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 CCDC186Q7Z3E2 898 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 PDCL2Q8N4E4 241 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 FBXO18Q8NFZ0 1043 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 MROH7-TTC4A0A0A0MT08 1334 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 SYNRGQ9UMZ2 1314 aa15.48■□□□□ 0.07
CDH1-201ENST00000261769 ATP2A1O14983 1001 aa15.47■□□□□ 0.07
CDH1-201ENST00000261769 TNNI1P19237 187 aa15.47■□□□□ 0.07
CDH1-201ENST00000261769 ZNF589Q86UQ0 364 aaPredicted RBP15.47■□□□□ 0.07
CDH1-201ENST00000261769 SH3RF3Q8TEJ3 882 aaPredicted RBP15.47■□□□□ 0.07
CDH1-201ENST00000261769 SLC7A3Q8WY07 619 aa15.47■□□□□ 0.07
CDH1-201ENST00000261769 GOLGA6L7A0A1B0GV03 622 aa15.47■□□□□ 0.07
CDH1-201ENST00000261769 CCDC84Q86UT8 332 aaPredicted RBP15.47■□□□□ 0.07
CDH1-201ENST00000261769 FAM178BQ8IXR5 827 aa15.47■□□□□ 0.07
CDH1-201ENST00000261769 SLC17A8Q8NDX2 589 aa15.47■□□□□ 0.07
CDH1-201ENST00000261769 DCAF4Q8WV16 495 aa15.47■□□□□ 0.07
CDH1-201ENST00000261769 RNF34Q969K3 372 aa15.47■□□□□ 0.07
CDH1-201ENST00000261769 NUP58Q9BVL2 599 aa15.47■□□□□ 0.07
CDH1-201ENST00000261769 NACA2Q9H009 215 aa15.47■□□□□ 0.07
CDH1-201ENST00000261769 TBC1D7Q9P0N9 293 aa15.47■□□□□ 0.07
CDH1-201ENST00000261769 PCDHA4Q9UN74 947 aa15.47■□□□□ 0.07
CDH1-201ENST00000261769 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.47■□□□□ 0.07
CDH1-201ENST00000261769 SLC16A2P36021 539 aa15.47■□□□□ 0.07
CDH1-201ENST00000261769 CACNB3P54284 484 aa15.47■□□□□ 0.07
CDH1-201ENST00000261769 ADALQ6DHV7 355 aa15.47■□□□□ 0.07
CDH1-201ENST00000261769 STYK1Q6J9G0 422 aa15.47■□□□□ 0.07
CDH1-201ENST00000261769 NELFCDQ8IXH7 590 aa15.47■□□□□ 0.07
CDH1-201ENST00000261769 BCRP11274 1271 aa15.46■□□□□ 0.07
CDH1-201ENST00000261769 CD19P15391 556 aa15.46■□□□□ 0.07
CDH1-201ENST00000261769 HOXD10P28358 340 aa15.46■□□□□ 0.07
CDH1-201ENST00000261769 STRIP1Q5VSL9 837 aa15.46■□□□□ 0.07
CDH1-201ENST00000261769 CCDC50Q8IVM0 306 aa15.46■□□□□ 0.07
CDH1-201ENST00000261769 ZNF577Q9BSK1 485 aa15.46■□□□□ 0.07
CDH1-201ENST00000261769 LONP1P36776 959 aaKnown RBP15.46■□□□□ 0.07
CDH1-201ENST00000261769 ATF7P17544 494 aaPredicted RBP15.46■□□□□ 0.07
CDH1-201ENST00000261769 DMP1Q13316 513 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms