RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 TMEM191BP0C7N4 346 aa18.73■□□□□ 0.59
SORT1-201ENST00000256637 STIM2Q9P246 746 aa18.73■□□□□ 0.59
SORT1-201ENST00000256637 PPP1R12AO14974 1030 aaPredicted RBP18.73■□□□□ 0.59
SORT1-201ENST00000256637 TBC1D8BQ0IIM8 1120 aa18.73■□□□□ 0.59
SORT1-201ENST00000256637 ANO1Q5XXA6 986 aa18.73■□□□□ 0.59
SORT1-201ENST00000256637 TRIM50Q86XT4 487 aa18.73■□□□□ 0.59
SORT1-201ENST00000256637 TRIM35Q9UPQ4 493 aa18.73■□□□□ 0.59
SORT1-201ENST00000256637 NOC2LQ9Y3T9 749 aaKnown RBP18.73■□□□□ 0.59
SORT1-201ENST00000256637 PRKAB2O43741 272 aa18.73■□□□□ 0.59
SORT1-201ENST00000256637 USP14P54578 494 aa18.73■□□□□ 0.59
SORT1-201ENST00000256637 ATF7P17544 494 aaPredicted RBP18.73■□□□□ 0.59
SORT1-201ENST00000256637 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.73■□□□□ 0.59
SORT1-201ENST00000256637 ABCB4P21439 1286 aa18.72■□□□□ 0.59
SORT1-201ENST00000256637 CAPN12Q6ZSI9 719 aa18.72■□□□□ 0.59
SORT1-201ENST00000256637 PDCL2Q8N4E4 241 aa18.72■□□□□ 0.59
SORT1-201ENST00000256637 SCARA5Q6ZMJ2 495 aa18.72■□□□□ 0.59
SORT1-201ENST00000256637 KBTBD3Q8NAB2 608 aa18.72■□□□□ 0.59
SORT1-201ENST00000256637 SNX14Q9Y5W7 946 aa18.72■□□□□ 0.59
SORT1-201ENST00000256637 ATP2A2P16615 1042 aaKnown RBP18.72■□□□□ 0.59
SORT1-201ENST00000256637 EIF2AK2P19525 551 aaKnown RBP18.72■□□□□ 0.59
SORT1-201ENST00000256637 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.72■□□□□ 0.59
SORT1-201ENST00000256637 USP17L2Q6R6M4 530 aa18.72■□□□□ 0.59
SORT1-201ENST00000256637 CTAGE9A4FU28 777 aa18.72■□□□□ 0.59
SORT1-201ENST00000256637 LRCH2Q5VUJ6 765 aa18.72■□□□□ 0.59
SORT1-201ENST00000256637 PI16Q6UXB8 463 aa18.72■□□□□ 0.59
SORT1-201ENST00000256637 ZNF467Q7Z7K2 595 aaPredicted RBP18.72■□□□□ 0.59
SORT1-201ENST00000256637 NELFBQ8WX92 580 aa18.72■□□□□ 0.59
SORT1-201ENST00000256637 LSM14BQ9BX40 385 aaKnown RBP18.72■□□□□ 0.59
SORT1-201ENST00000256637 TAB2Q9NYJ8 693 aa18.72■□□□□ 0.59
SORT1-201ENST00000256637 LMCD1Q9NZU5 365 aa18.72■□□□□ 0.59
SORT1-201ENST00000256637 PIK3C2GO75747 1445 aa18.72■□□□□ 0.59
SORT1-201ENST00000256637 DENND3A2RUS2 1198 aa18.72■□□□□ 0.59
SORT1-201ENST00000256637 RSRC2Q7L4I2 434 aaKnown RBP18.72■□□□□ 0.59
SORT1-201ENST00000256637 TRMT44Q8IYL2 757 aaKnown RBP18.72■□□□□ 0.59
SORT1-201ENST00000256637 CETN3O15182 167 aa18.71■□□□□ 0.59
SORT1-201ENST00000256637 DCTPP1Q9H773 170 aa18.71■□□□□ 0.59
SORT1-201ENST00000256637 CTTNBP2NLQ9P2B4 639 aa18.71■□□□□ 0.59
SORT1-201ENST00000256637 STAM2O75886 525 aa18.71■□□□□ 0.59
SORT1-201ENST00000256637 PPP2R5AQ15172 486 aa18.71■□□□□ 0.59
SORT1-201ENST00000256637 CERS3Q8IU89 383 aa18.71■□□□□ 0.59
SORT1-201ENST00000256637 PDE6AP16499 860 aa18.71■□□□□ 0.59
SORT1-201ENST00000256637 CC2D2BQ6DHV5 1058 aa18.71■□□□□ 0.59
SORT1-201ENST00000256637 ADAT2Q7Z6V5 191 aaKnown RBP18.71■□□□□ 0.59
SORT1-201ENST00000256637 TLR7Q9NYK1 1049 aaKnown RBP18.71■□□□□ 0.59
SORT1-201ENST00000256637 SNX25Q9H3E2 840 aa18.71■□□□□ 0.59
SORT1-201ENST00000256637 SYNRGQ9UMZ2 1314 aa18.71■□□□□ 0.59
SORT1-201ENST00000256637 CRKP46108 304 aa18.7■□□□□ 0.58
SORT1-201ENST00000256637 KRT33BQ14525 404 aa18.7■□□□□ 0.58
SORT1-201ENST00000256637 NLRC4Q9NPP4 1024 aa18.7■□□□□ 0.58
SORT1-201ENST00000256637 LEMD3Q9Y2U8 911 aa18.7■□□□□ 0.58
SORT1-201ENST00000256637 PNOCQ13519 176 aa18.7■□□□□ 0.58
SORT1-201ENST00000256637 UBN1Q9NPG3 1134 aa18.7■□□□□ 0.58
SORT1-201ENST00000256637 TTLL1O95922 423 aa18.7■□□□□ 0.58
SORT1-201ENST00000256637 ARMCX5Q6P1M9 558 aa18.7■□□□□ 0.58
SORT1-201ENST00000256637 ARHGEF1Q92888 912 aaKnown RBP18.7■□□□□ 0.58
SORT1-201ENST00000256637 ALKBH8Q96BT7 664 aaKnown RBP18.7■□□□□ 0.58
SORT1-201ENST00000256637 SNAP23O00161 211 aa18.7■□□□□ 0.58
SORT1-201ENST00000256637 BRAPQ7Z569 592 aa18.7■□□□□ 0.58
SORT1-201ENST00000256637 SH3RF3Q8TEJ3 882 aaPredicted RBP18.7■□□□□ 0.58
SORT1-201ENST00000256637 TNNC1P63316 161 aa18.7■□□□□ 0.58
SORT1-201ENST00000256637 PEG3Q9GZU2 1588 aa18.7■□□□□ 0.58
SORT1-201ENST00000256637 ELP1O95163 1332 aa18.7■□□□□ 0.58
SORT1-201ENST00000256637 PLCB4Q15147 1175 aa18.7■□□□□ 0.58
SORT1-201ENST00000256637 ESYT2A0FGR8 921 aa18.69■□□□□ 0.58
SORT1-201ENST00000256637 FAM160A1Q05DH4 1040 aa18.69■□□□□ 0.58
SORT1-201ENST00000256637 KCNH3Q9ULD8 1083 aa18.69■□□□□ 0.58
SORT1-201ENST00000256637 ZBTB7BO15156 539 aaPredicted RBP18.69■□□□□ 0.58
SORT1-201ENST00000256637 HOXD10P28358 340 aa18.69■□□□□ 0.58
SORT1-201ENST00000256637 DPF3Q92784 378 aa18.69■□□□□ 0.58
SORT1-201ENST00000256637 MMP19Q99542 508 aa18.69■□□□□ 0.58
SORT1-201ENST00000256637 ADGRL3Q9HAR2 1447 aa18.69■□□□□ 0.58
SORT1-201ENST00000256637 TFRCP02786 760 aaKnown RBP18.69■□□□□ 0.58
SORT1-201ENST00000256637 FAM83BQ5T0W9 1011 aa18.69■□□□□ 0.58
SORT1-201ENST00000256637 DEFB132Q7Z7B7 95 aa18.69■□□□□ 0.58
SORT1-201ENST00000256637 WDR17Q8IZU2 1322 aa18.69■□□□□ 0.58
SORT1-201ENST00000256637 MTRQ99707 1265 aa18.69■□□□□ 0.58
SORT1-201ENST00000256637 PNMA3Q9UL41 463 aa18.69■□□□□ 0.58
SORT1-201ENST00000256637 CCDC89Q8N998 374 aa18.69■□□□□ 0.58
SORT1-201ENST00000256637 BLMP54132 1417 aaPredicted RBP18.69■□□□□ 0.58
SORT1-201ENST00000256637 MAP3K1Q13233 1512 aa18.69■□□□□ 0.58
SORT1-201ENST00000256637 GIPC1O14908 333 aa18.68■□□□□ 0.58
SORT1-201ENST00000256637 PRPF31Q8WWY3 499 aaKnown RBP18.68■□□□□ 0.58
SORT1-201ENST00000256637 MECOMQ03112 1051 aa18.68■□□□□ 0.58
SORT1-201ENST00000256637 TYRO3Q06418 890 aa18.68■□□□□ 0.58
SORT1-201ENST00000256637 MCM6Q14566 821 aa18.68■□□□□ 0.58
SORT1-201ENST00000256637 LZTS2Q9BRK4 669 aa18.68■□□□□ 0.58
SORT1-201ENST00000256637 ZNF215Q9UL58 517 aaPredicted RBP18.68■□□□□ 0.58
SORT1-201ENST00000256637 TXNRD1Q16881 649 aa18.68■□□□□ 0.58
SORT1-201ENST00000256637 SYDE2Q5VT97 1194 aa18.68■□□□□ 0.58
SORT1-201ENST00000256637 EHBP1Q8NDI1 1231 aa18.68■□□□□ 0.58
SORT1-201ENST00000256637 EPSTI1Q96J88 318 aa18.68■□□□□ 0.58
SORT1-201ENST00000256637 LUC7L2Q9Y383 392 aaKnown RBP18.68■□□□□ 0.58
SORT1-201ENST00000256637 ZNF18P17022 549 aa18.68■□□□□ 0.58
SORT1-201ENST00000256637 CCDC110Q8TBZ0 833 aa18.68■□□□□ 0.58
SORT1-201ENST00000256637 MXD3Q9BW11 206 aa18.68■□□□□ 0.58
SORT1-201ENST00000256637 TNKSO95271 1327 aa18.68■□□□□ 0.58
SORT1-201ENST00000256637 GH2P01242 217 aa18.68■□□□□ 0.58
SORT1-201ENST00000256637 SKILP12757 684 aa18.68■□□□□ 0.58
SORT1-201ENST00000256637 CCDC6Q16204 474 aa18.68■□□□□ 0.58
SORT1-201ENST00000256637 DNMT1P26358 1616 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms