RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 ARHGAP6O43182 974 aa12.73□□□□□ -0.37
PDE6B-201ENST00000255622 PRPF3O43395 683 aaKnown RBP12.73□□□□□ -0.37
PDE6B-201ENST00000255622 PRDX5P30044 214 aa12.73□□□□□ -0.37
PDE6B-201ENST00000255622 MECOMQ03112 1051 aa12.73□□□□□ -0.37
PDE6B-201ENST00000255622 ARHGAP29Q52LW3 1261 aa12.73□□□□□ -0.37
PDE6B-201ENST00000255622 IQCA1Q86XH1 822 aa12.73□□□□□ -0.37
PDE6B-201ENST00000255622 CPLX3Q8WVH0 158 aa12.73□□□□□ -0.37
PDE6B-201ENST00000255622 MTA3Q9BTC8 594 aa12.73□□□□□ -0.37
PDE6B-201ENST00000255622 BLZF1Q9H2G9 400 aa12.73□□□□□ -0.37
PDE6B-201ENST00000255622 PARP3Q9Y6F1 533 aa12.73□□□□□ -0.37
PDE6B-201ENST00000255622 GOLGB1Q14789 3259 aaKnown RBP12.73□□□□□ -0.37
PDE6B-201ENST00000255622 PHLPP2Q6ZVD8 1323 aa12.73□□□□□ -0.37
PDE6B-201ENST00000255622 CASZ1Q86V15 1759 aa12.73□□□□□ -0.37
PDE6B-201ENST00000255622 A0A0U1RQJ8 604 aa12.73□□□□□ -0.37
PDE6B-201ENST00000255622 EIF3CLB5ME19 914 aaKnown RBP12.73□□□□□ -0.37
PDE6B-201ENST00000255622 XBP1P17861 261 aa12.73□□□□□ -0.37
PDE6B-201ENST00000255622 RCAN1P53805 252 aa12.73□□□□□ -0.37
PDE6B-201ENST00000255622 NUTM2AQ8IVF1 878 aaPredicted RBP12.73□□□□□ -0.37
PDE6B-201ENST00000255622 ATRIPQ8WXE1 791 aa12.73□□□□□ -0.37
PDE6B-201ENST00000255622 EIF3CQ99613 913 aaKnown RBP12.73□□□□□ -0.37
PDE6B-201ENST00000255622 ZNF232Q9UNY5 417 aa12.73□□□□□ -0.37
PDE6B-201ENST00000255622 NUTM2BA6NNL0 878 aaPredicted RBP12.72□□□□□ -0.37
PDE6B-201ENST00000255622 NUTM2EB1AL46 878 aaPredicted RBP12.72□□□□□ -0.37
PDE6B-201ENST00000255622 DPYDQ12882 1025 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 PTGDRQ13258 359 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 DHX8Q14562 1220 aaKnown RBP12.72□□□□□ -0.37
PDE6B-201ENST00000255622 TBC1D9BQ66K14 1250 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 TMTC3Q6ZXV5 915 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 PTF1AQ7RTS3 328 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 ARHGEF1Q92888 912 aaKnown RBP12.72□□□□□ -0.37
PDE6B-201ENST00000255622 NSUN4Q96CB9 384 aaKnown RBP12.72□□□□□ -0.37
PDE6B-201ENST00000255622 CARD6Q9BX69 1037 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 DACH1Q9UI36 760 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 CNTNAP5Q8WYK1 1306 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 SCN7AQ01118 1682 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 SOWAHDA6NJG2 315 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 UBE4AQ14139 1066 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 NR1I3Q14994 352 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 KARSQ15046 597 aaKnown RBP12.72□□□□□ -0.37
PDE6B-201ENST00000255622 PIK3AP1Q6ZUJ8 805 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 APTXQ7Z2E3 356 aaKnown RBP12.72□□□□□ -0.37
PDE6B-201ENST00000255622 TNFRSF25Q93038 417 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 BRIP1Q9BX63 1249 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 IRX2Q9BZI1 471 aaPredicted RBP12.72□□□□□ -0.37
PDE6B-201ENST00000255622 ZNF652Q9Y2D9 606 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 SYNRGQ9UMZ2 1314 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 RREB1Q92766 1687 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 MYO1BO43795 1136 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 GNG11P61952 73 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 TTC38Q5R3I4 469 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 TRIML1Q8N9V2 468 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 CEP89Q96ST8 783 aa12.72□□□□□ -0.37
PDE6B-201ENST00000255622 CCP110O43303 1012 aa12.71□□□□□ -0.37
PDE6B-201ENST00000255622 H2AFXP16104 143 aaPredicted RBP12.71□□□□□ -0.37
PDE6B-201ENST00000255622 CDC25AP30304 524 aa12.71□□□□□ -0.37
PDE6B-201ENST00000255622 MCM7P33993 719 aa12.71□□□□□ -0.37
PDE6B-201ENST00000255622 CLCN6P51797 869 aa12.71□□□□□ -0.37
PDE6B-201ENST00000255622 IL17AQ16552 155 aa12.71□□□□□ -0.37
PDE6B-201ENST00000255622 KANK3Q6NY19 840 aa12.71□□□□□ -0.37
PDE6B-201ENST00000255622 GBP6Q6ZN66 633 aa12.71□□□□□ -0.37
PDE6B-201ENST00000255622 TXNRD3Q86VQ6 643 aa12.71□□□□□ -0.37
PDE6B-201ENST00000255622 DCP1AQ9NPI6 582 aaPredicted RBP12.71□□□□□ -0.37
PDE6B-201ENST00000255622 A0A1B0GTH6 734 aa12.71□□□□□ -0.38
PDE6B-201ENST00000255622 ZSCAN12O43309 604 aa12.71□□□□□ -0.38
PDE6B-201ENST00000255622 IRX1P78414 480 aaPredicted RBP12.71□□□□□ -0.38
PDE6B-201ENST00000255622 CUL4BQ13620 913 aa12.71□□□□□ -0.38
PDE6B-201ENST00000255622 ZRSR2Q15696 482 aaKnown RBP12.71□□□□□ -0.38
PDE6B-201ENST00000255622 MIEF2Q96C03 454 aa12.71□□□□□ -0.38
PDE6B-201ENST00000255622 MRPL44Q9H9J2 332 aaKnown RBP12.71□□□□□ -0.38
PDE6B-201ENST00000255622 SNX1Q13596 522 aa12.7□□□□□ -0.38
PDE6B-201ENST00000255622 SF3B3Q15393 1217 aaKnown RBP12.7□□□□□ -0.38
PDE6B-201ENST00000255622 SH3RF1Q7Z6J0 888 aa12.7□□□□□ -0.38
PDE6B-201ENST00000255622 SUGP1Q8IWZ8 645 aaKnown RBP12.7□□□□□ -0.38
PDE6B-201ENST00000255622 FAXDC2Q96IV6 333 aa12.7□□□□□ -0.38
PDE6B-201ENST00000255622 SRP68Q9UHB9 627 aaKnown RBP12.7□□□□□ -0.38
PDE6B-201ENST00000255622 CTNND2Q9UQB3 1225 aa12.7□□□□□ -0.38
PDE6B-201ENST00000255622 XDHP47989 1333 aa12.7□□□□□ -0.38
PDE6B-201ENST00000255622 STX10O60499 249 aa12.7□□□□□ -0.38
PDE6B-201ENST00000255622 RBL2Q08999 1139 aa12.7□□□□□ -0.38
PDE6B-201ENST00000255622 JPH2Q9BR39 696 aaPredicted RBP12.7□□□□□ -0.38
PDE6B-201ENST00000255622 MAF1Q9H063 256 aa12.7□□□□□ -0.38
PDE6B-201ENST00000255622 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.7□□□□□ -0.38
PDE6B-201ENST00000255622 PPP1R3GB7ZBB8 358 aa12.7□□□□□ -0.38
PDE6B-201ENST00000255622 ERCC5P28715 1186 aaPredicted RBP12.7□□□□□ -0.38
PDE6B-201ENST00000255622 CCT6AP40227 531 aaKnown RBP12.7□□□□□ -0.38
PDE6B-201ENST00000255622 LEKR1Q6ZMV7 388 aa12.7□□□□□ -0.38
PDE6B-201ENST00000255622 RPUSD2Q8IZ73 545 aaKnown RBP12.7□□□□□ -0.38
PDE6B-201ENST00000255622 RASGRP4Q8TDF6 673 aa12.7□□□□□ -0.38
PDE6B-201ENST00000255622 GPKOWQ92917 476 aaPredicted RBP eCLIP12.7□□□□□ -0.38
PDE6B-201ENST00000255622 MTRQ99707 1265 aa12.7□□□□□ -0.38
PDE6B-201ENST00000255622 MTMR7Q9Y216 660 aa12.7□□□□□ -0.38
PDE6B-201ENST00000255622 FRMD3A2A2Y4 597 aa12.69□□□□□ -0.38
PDE6B-201ENST00000255622 FGRP09769 529 aa12.69□□□□□ -0.38
PDE6B-201ENST00000255622 MYBL2P10244 700 aa12.69□□□□□ -0.38
PDE6B-201ENST00000255622 NLRP5P59047 1200 aa12.69□□□□□ -0.38
PDE6B-201ENST00000255622 SPATA1Q5VX52 437 aa12.69□□□□□ -0.38
PDE6B-201ENST00000255622 WWC2Q6AWC2 1192 aa12.69□□□□□ -0.38
PDE6B-201ENST00000255622 FBXO33Q7Z6M2 555 aa12.69□□□□□ -0.38
PDE6B-201ENST00000255622 FCHSD1Q86WN1 690 aa12.69□□□□□ -0.38
PDE6B-201ENST00000255622 CTCFLQ8NI51 663 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms