RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 NLRP5P59047 1200 aa8.46□□□□□ -1.05
USP29-201ENST00000254181 MRPS35P82673 323 aaKnown RBP8.46□□□□□ -1.05
USP29-201ENST00000254181 TSPY1Q01534 308 aa8.46□□□□□ -1.05
USP29-201ENST00000254181 POU5F1BQ06416 359 aa8.46□□□□□ -1.05
USP29-201ENST00000254181 MYBPC3Q14896 1274 aa8.46□□□□□ -1.05
USP29-201ENST00000254181 P3H1Q32P28 736 aa8.46□□□□□ -1.05
USP29-201ENST00000254181 NUGGCQ68CJ6 796 aa8.46□□□□□ -1.05
USP29-201ENST00000254181 TTC14Q96N46 770 aa8.46□□□□□ -1.05
USP29-201ENST00000254181 TSC22D4Q9Y3Q8 395 aa8.46□□□□□ -1.05
USP29-201ENST00000254181 CFTRP13569 1480 aa8.46□□□□□ -1.05
USP29-201ENST00000254181 TFRCP02786 760 aaKnown RBP8.46□□□□□ -1.05
USP29-201ENST00000254181 TROVE2P10155 538 aaKnown RBP eCLIP8.46□□□□□ -1.05
USP29-201ENST00000254181 POLR2FP61218 127 aaKnown RBP8.46□□□□□ -1.05
USP29-201ENST00000254181 KLC1Q07866 573 aa8.46□□□□□ -1.05
USP29-201ENST00000254181 NFX1Q12986 1120 aaKnown RBP8.46□□□□□ -1.05
USP29-201ENST00000254181 RCN1Q15293 331 aa8.46□□□□□ -1.05
USP29-201ENST00000254181 MAP7D3Q8IWC1 876 aa8.46□□□□□ -1.05
USP29-201ENST00000254181 DHX40Q8IX18 779 aaKnown RBP8.46□□□□□ -1.05
USP29-201ENST00000254181 KLHDC4Q8TBB5 520 aa8.46□□□□□ -1.05
USP29-201ENST00000254181 GLMNQ92990 594 aa8.46□□□□□ -1.05
USP29-201ENST00000254181 HPS3Q969F9 1004 aa8.46□□□□□ -1.05
USP29-201ENST00000254181 JAKMIP2Q96AA8 810 aa8.46□□□□□ -1.05
USP29-201ENST00000254181 ZNF653Q96CK0 615 aa8.46□□□□□ -1.05
USP29-201ENST00000254181 CLMNQ96JQ2 1002 aa8.46□□□□□ -1.05
USP29-201ENST00000254181 DHRS1Q96LJ7 313 aa8.46□□□□□ -1.05
USP29-201ENST00000254181 NDNQ99608 321 aa8.46□□□□□ -1.05
USP29-201ENST00000254181 UBE2OQ9C0C9 1292 aaKnown RBP8.46□□□□□ -1.05
USP29-201ENST00000254181 TCHHQ07283 1943 aa8.46□□□□□ -1.06
USP29-201ENST00000254181 ZBTB7BO15156 539 aaPredicted RBP8.46□□□□□ -1.06
USP29-201ENST00000254181 P4HA2O15460 535 aa8.46□□□□□ -1.06
USP29-201ENST00000254181 ZFYP08048 801 aaPredicted RBP8.46□□□□□ -1.06
USP29-201ENST00000254181 ATP2A2P16615 1042 aaKnown RBP8.46□□□□□ -1.06
USP29-201ENST00000254181 SERPINB4P48594 390 aa8.46□□□□□ -1.06
USP29-201ENST00000254181 NSUN2Q08J23 767 aaKnown RBP eCLIP8.46□□□□□ -1.06
USP29-201ENST00000254181 BLMHQ13867 455 aa8.46□□□□□ -1.06
USP29-201ENST00000254181 MYCBPAPQ8TBZ2 947 aa8.46□□□□□ -1.06
USP29-201ENST00000254181 HIC2Q96JB3 615 aa8.46□□□□□ -1.06
USP29-201ENST00000254181 KCND1Q9NSA2 647 aa8.46□□□□□ -1.06
USP29-201ENST00000254181 SLC27A2O14975 620 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 LINGO3P0C6S8 592 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 MSL3P1P0C860 447 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 ATP1A3P13637 1013 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 MAP3K12Q12852 859 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 DPCR1Q3MIW9 517 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 BICDL1Q6ZP65 573 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 TEX9Q8N6V9 391 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 ZNF713Q8N859 430 aaPredicted RBP8.45□□□□□ -1.06
USP29-201ENST00000254181 MAGEC3Q8TD91 643 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 PBXIP1Q96AQ6 731 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 NAF1Q96HR8 494 aaKnown RBP8.45□□□□□ -1.06
USP29-201ENST00000254181 PIDD1Q9HB75 910 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 ATXN10Q9UBB4 475 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 PPP1R9AQ9ULJ8 1098 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 MTHFSP49914 203 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 PTGISQ16647 500 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 ME3Q16798 604 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 CAPN12Q6ZSI9 719 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 ARHGAP27Q6ZUM4 889 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 BTN2A1Q7KYR7 527 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 RASGRP2Q7LDG7 609 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 IFT81Q8WYA0 676 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 MAP3K14Q99558 947 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 DCTPP1Q9H773 170 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 PPIP5K1Q6PFW1 1433 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 PRPF6O94906 941 aaKnown RBP8.45□□□□□ -1.06
USP29-201ENST00000254181 PDE1AP54750 535 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 LARP1Q6PKG0 1096 aaKnown RBP8.45□□□□□ -1.06
USP29-201ENST00000254181 CYFIP2Q96F07 1278 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 TCEANC2Q96MN5 208 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 SIKE1Q9BRV8 207 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 RPAP3Q9H6T3 665 aaPredicted RBP8.45□□□□□ -1.06
USP29-201ENST00000254181 SAMD15Q9P1V8 674 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 POLG2Q9UHN1 485 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 WDR37Q9Y2I8 494 aa8.45□□□□□ -1.06
USP29-201ENST00000254181 POLR1AO95602 1720 aaPredicted RBP8.45□□□□□ -1.06
USP29-201ENST00000254181 RALGAPBQ86X10 1494 aa8.44□□□□□ -1.06
USP29-201ENST00000254181 STX10O60499 249 aa8.44□□□□□ -1.06
USP29-201ENST00000254181 SHOX2O60902 331 aaPredicted RBP8.44□□□□□ -1.06
USP29-201ENST00000254181 AARSP49588 968 aaKnown RBP eCLIP8.44□□□□□ -1.06
USP29-201ENST00000254181 PDE6CP51160 858 aa8.44□□□□□ -1.06
USP29-201ENST00000254181 ELF3P78545 371 aaPredicted RBP8.44□□□□□ -1.06
USP29-201ENST00000254181 PDE1CQ14123 709 aaPredicted RBP8.44□□□□□ -1.06
USP29-201ENST00000254181 SEPT6Q14141 434 aa8.44□□□□□ -1.06
USP29-201ENST00000254181 HLTFQ14527 1009 aaKnown RBP eCLIP8.44□□□□□ -1.06
USP29-201ENST00000254181 RUFY3Q7L099 469 aa8.44□□□□□ -1.06
USP29-201ENST00000254181 YTHDF3Q7Z739 585 aaKnown RBP8.44□□□□□ -1.06
USP29-201ENST00000254181 USP6NLQ92738 828 aa8.44□□□□□ -1.06
USP29-201ENST00000254181 ACSBG1Q96GR2 724 aa8.44□□□□□ -1.06
USP29-201ENST00000254181 RNPC3Q96LT9 517 aaKnown RBP8.44□□□□□ -1.06
USP29-201ENST00000254181 ABCG4Q9H172 646 aa8.44□□□□□ -1.06
USP29-201ENST00000254181 GGNBP2Q9H3C7 697 aa8.44□□□□□ -1.06
USP29-201ENST00000254181 SENP3Q9H4L4 574 aaPredicted RBP8.44□□□□□ -1.06
USP29-201ENST00000254181 ZWILCHQ9H900 591 aa8.44□□□□□ -1.06
USP29-201ENST00000254181 SPG7Q9UQ90 795 aa8.44□□□□□ -1.06
USP29-201ENST00000254181 ZNF608Q9ULD9 1512 aaPredicted RBP8.44□□□□□ -1.06
USP29-201ENST00000254181 SPDYE5A6NIY4 337 aa8.44□□□□□ -1.06
USP29-201ENST00000254181 ENC1O14682 589 aa8.44□□□□□ -1.06
USP29-201ENST00000254181 RAPGEF3O95398 923 aa8.44□□□□□ -1.06
USP29-201ENST00000254181 GEMIN4P57678 1058 aaKnown RBP8.44□□□□□ -1.06
USP29-201ENST00000254181 CFAP157Q5JU67 520 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms