RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 SLC38A10Q9HBR0 1119 aa15.04■□□□□ -0
VPREB3-201ENST00000248948 KDM4AO75164 1064 aa15.03■□□□□ -0
VPREB3-201ENST00000248948 GJB1P08034 283 aa15.03■□□□□ -0
VPREB3-201ENST00000248948 CYP2B6P20813 491 aa15.03■□□□□ -0
VPREB3-201ENST00000248948 PTH1RQ03431 593 aa15.03■□□□□ -0
VPREB3-201ENST00000248948 MTFR1Q15390 333 aa15.03■□□□□ -0
VPREB3-201ENST00000248948 MAP3K21Q5TCX8 1036 aa15.03■□□□□ -0
VPREB3-201ENST00000248948 RCSD1Q6JBY9 416 aa15.03■□□□□ -0
VPREB3-201ENST00000248948 SAMD1Q6SPF0 538 aaPredicted RBP15.03■□□□□ -0
VPREB3-201ENST00000248948 NCAPG2Q86XI2 1143 aa15.03■□□□□ -0
VPREB3-201ENST00000248948 CHURC1Q8WUH1 139 aa15.03■□□□□ -0
VPREB3-201ENST00000248948 MAP4K1Q92918 833 aa15.03■□□□□ -0
VPREB3-201ENST00000248948 KIFC2Q96AC6 838 aa15.03■□□□□ -0
VPREB3-201ENST00000248948 ESYT1Q9BSJ8 1104 aa15.03■□□□□ -0
VPREB3-201ENST00000248948 PAK6Q9NQU5 681 aaPredicted RBP15.03■□□□□ -0
VPREB3-201ENST00000248948 LCTP09848 1927 aa15.03■□□□□ -0
VPREB3-201ENST00000248948 TNKSO95271 1327 aa15.02■□□□□ -0
VPREB3-201ENST00000248948 B4E1Z4 1266 aa15.02■□□□□ -0
VPREB3-201ENST00000248948 ZBED4O75132 1171 aa15.02■□□□□ -0
VPREB3-201ENST00000248948 CYP21A2P08686 494 aa15.02■□□□□ -0
VPREB3-201ENST00000248948 SNHG28P0DPA3 235 aa15.02■□□□□ -0
VPREB3-201ENST00000248948 ADORA2AP29274 412 aa15.02■□□□□ -0
VPREB3-201ENST00000248948 STAT3P40763 770 aa15.02■□□□□ -0
VPREB3-201ENST00000248948 GJA8P48165 433 aa15.02■□□□□ -0
VPREB3-201ENST00000248948 CCDC96Q2M329 555 aa15.02■□□□□ -0
VPREB3-201ENST00000248948 CASC1Q6TDU7 716 aa15.02■□□□□ -0
VPREB3-201ENST00000248948 KIAA1211Q6ZU35 1233 aa15.02■□□□□ -0
VPREB3-201ENST00000248948 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.02■□□□□ -0
VPREB3-201ENST00000248948 SKAP1Q86WV1 359 aa15.02■□□□□ -0
VPREB3-201ENST00000248948 RNF208Q9H0X6 261 aa15.02■□□□□ -0
VPREB3-201ENST00000248948 SLC5A4Q9NY91 659 aa15.02■□□□□ -0
VPREB3-201ENST00000248948 ISY1Q9ULR0 285 aaKnown RBP15.02■□□□□ -0
VPREB3-201ENST00000248948 RPTORQ8N122 1335 aa15.01□□□□□ -0.01
VPREB3-201ENST00000248948 TMEM232C9JQI7 657 aa15.01□□□□□ -0.01
VPREB3-201ENST00000248948 CDC45O75419 566 aa15.01□□□□□ -0.01
VPREB3-201ENST00000248948 PDHBP11177 359 aa15.01□□□□□ -0.01
VPREB3-201ENST00000248948 FCER1AP12319 257 aa15.01□□□□□ -0.01
VPREB3-201ENST00000248948 MCCP23508 829 aa15.01□□□□□ -0.01
VPREB3-201ENST00000248948 TRDNQ13061 729 aa15.01□□□□□ -0.01
VPREB3-201ENST00000248948 IKQ13123 557 aaPredicted RBP15.01□□□□□ -0.01
VPREB3-201ENST00000248948 SNRNP48Q6IEG0 339 aaKnown RBP15.01□□□□□ -0.01
VPREB3-201ENST00000248948 ANKS1AQ92625 1134 aa15.01□□□□□ -0.01
VPREB3-201ENST00000248948 SHISA4Q96DD7 197 aa15.01□□□□□ -0.01
VPREB3-201ENST00000248948 ZSCAN10Q96SZ4 725 aaPredicted RBP15.01□□□□□ -0.01
VPREB3-201ENST00000248948 UBAC1Q9BSL1 405 aa15.01□□□□□ -0.01
VPREB3-201ENST00000248948 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.01□□□□□ -0.01
VPREB3-201ENST00000248948 UNC93B1Q9H1C4 597 aa15.01□□□□□ -0.01
VPREB3-201ENST00000248948 CTDP1Q9Y5B0 961 aaPredicted RBP15.01□□□□□ -0.01
VPREB3-201ENST00000248948 RBM8AQ9Y5S9 174 aaKnown RBP15.01□□□□□ -0.01
VPREB3-201ENST00000248948 MKI67P46013 3256 aaKnown RBP15.01□□□□□ -0.01
VPREB3-201ENST00000248948 MYCP01106 439 aaPredicted RBP15□□□□□ -0.01
VPREB3-201ENST00000248948 PRKAR2AP13861 404 aaKnown RBP15□□□□□ -0.01
VPREB3-201ENST00000248948 KCTD2Q14681 263 aa15□□□□□ -0.01
VPREB3-201ENST00000248948 OLFML2BQ68BL8 750 aa15□□□□□ -0.01
VPREB3-201ENST00000248948 BTNL9Q6UXG8 535 aa15□□□□□ -0.01
VPREB3-201ENST00000248948 KCTD1Q719H9 257 aa15□□□□□ -0.01
VPREB3-201ENST00000248948 RASGRP2Q7LDG7 609 aa15□□□□□ -0.01
VPREB3-201ENST00000248948 RALYLQ86SE5 291 aaKnown RBP15□□□□□ -0.01
VPREB3-201ENST00000248948 ENAHQ8N8S7 591 aaPredicted RBP15□□□□□ -0.01
VPREB3-201ENST00000248948 MMP19Q99542 508 aa15□□□□□ -0.01
VPREB3-201ENST00000248948 LSG1Q9H089 658 aaKnown RBP15□□□□□ -0.01
VPREB3-201ENST00000248948 HMX1Q9NP08 348 aaPredicted RBP15□□□□□ -0.01
VPREB3-201ENST00000248948 PPP4R2Q9NY27 417 aa15□□□□□ -0.01
VPREB3-201ENST00000248948 ZSWIM5Q9P217 1185 aa15□□□□□ -0.01
VPREB3-201ENST00000248948 FBXO40Q9UH90 709 aa15□□□□□ -0.01
VPREB3-201ENST00000248948 PRR12Q9ULL5 1215 aa15□□□□□ -0.01
VPREB3-201ENST00000248948 MCM3APO60318 1980 aa15□□□□□ -0.01
VPREB3-201ENST00000248948 IGHA2P01877 340 aa14.99□□□□□ -0.01
VPREB3-201ENST00000248948 EN2P19622 333 aaPredicted RBP14.99□□□□□ -0.01
VPREB3-201ENST00000248948 ZNF543Q08ER8 600 aa14.99□□□□□ -0.01
VPREB3-201ENST00000248948 CCL14Q16627 93 aa14.99□□□□□ -0.01
VPREB3-201ENST00000248948 GPATCH4Q5T3I0 446 aaKnown RBP14.99□□□□□ -0.01
VPREB3-201ENST00000248948 MFSD14CQ5VZR4 134 aa14.99□□□□□ -0.01
VPREB3-201ENST00000248948 DPP9Q86TI2 863 aa14.99□□□□□ -0.01
VPREB3-201ENST00000248948 PNMA1Q8ND90 353 aa14.99□□□□□ -0.01
VPREB3-201ENST00000248948 CHST13Q8NET6 341 aa14.99□□□□□ -0.01
VPREB3-201ENST00000248948 NCOA7Q8NI08 942 aa14.99□□□□□ -0.01
VPREB3-201ENST00000248948 U2AF1L4Q8WU68 220 aaKnown RBP14.99□□□□□ -0.01
VPREB3-201ENST00000248948 ZKSCAN3Q9BRR0 538 aa14.99□□□□□ -0.01
VPREB3-201ENST00000248948 KAT14Q9H8E8 782 aa14.99□□□□□ -0.01
VPREB3-201ENST00000248948 ZNF536O15090 1300 aa14.98□□□□□ -0.01
VPREB3-201ENST00000248948 ALPK3Q96L96 1907 aa14.98□□□□□ -0.01
VPREB3-201ENST00000248948 E7EWF7 191 aa14.98□□□□□ -0.01
VPREB3-201ENST00000248948 TRIM32Q13049 653 aa14.98□□□□□ -0.01
VPREB3-201ENST00000248948 TKFCQ3LXA3 575 aa14.98□□□□□ -0.01
VPREB3-201ENST00000248948 CPXCR1Q8N123 301 aa14.98□□□□□ -0.01
VPREB3-201ENST00000248948 NPLOC4Q8TAT6 608 aa14.98□□□□□ -0.01
VPREB3-201ENST00000248948 RANBP17Q9H2T7 1088 aaKnown RBP14.98□□□□□ -0.01
VPREB3-201ENST00000248948 RAVER2Q9HCJ3 691 aaKnown RBP14.98□□□□□ -0.01
VPREB3-201ENST00000248948 ANO2Q9NQ90 1003 aa14.98□□□□□ -0.01
VPREB3-201ENST00000248948 FLRT1Q9NZU1 646 aa14.98□□□□□ -0.01
VPREB3-201ENST00000248948 PNMA2Q9UL42 364 aa14.98□□□□□ -0.01
VPREB3-201ENST00000248948 DIS3Q9Y2L1 958 aaKnown RBP14.98□□□□□ -0.01
VPREB3-201ENST00000248948 SMCHD1A6NHR9 2005 aa14.98□□□□□ -0.01
VPREB3-201ENST00000248948 FRMPD2Q68DX3 1309 aaPredicted RBP14.97□□□□□ -0.01
VPREB3-201ENST00000248948 SGPL1O95470 568 aa14.97□□□□□ -0.01
VPREB3-201ENST00000248948 SART3Q15020 963 aaKnown RBP14.97□□□□□ -0.01
VPREB3-201ENST00000248948 SEC23AQ15436 765 aa14.97□□□□□ -0.01
VPREB3-201ENST00000248948 ASPRV1Q53RT3 343 aa14.97□□□□□ -0.01
VPREB3-201ENST00000248948 IFIT1BQ5T764 474 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms