RNA–Protein interactions for RNA: ENST00000243914.7

CTCFL-201, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-201ENST00000243914 ZNF287Q9HBT7 754 aa12.54□□□□□ -0.4
CTCFL-201ENST00000243914 FANCLQ9NW38 375 aa12.54□□□□□ -0.4
CTCFL-201ENST00000243914 SEC63Q9UGP8 760 aaKnown RBP12.54□□□□□ -0.4
CTCFL-201ENST00000243914 NLRP12P59046 1061 aa12.54□□□□□ -0.4
CTCFL-201ENST00000243914 CACTINQ8WUQ7 758 aaKnown RBP12.54□□□□□ -0.4
CTCFL-201ENST00000243914 NID2Q14112 1375 aa12.54□□□□□ -0.4
CTCFL-201ENST00000243914 PSDA5PKW4 1024 aaPredicted RBP12.54□□□□□ -0.4
CTCFL-201ENST00000243914 TOP1P11387 765 aaKnown RBP12.54□□□□□ -0.4
CTCFL-201ENST00000243914 FMR1Q06787 632 aaKnown RBP eCLIP12.54□□□□□ -0.49e-8■■□□□ 14.3
CTCFL-201ENST00000243914 ARID3AQ99856 593 aa12.54□□□□□ -0.4
CTCFL-201ENST00000243914 PCDHA4Q9UN74 947 aa12.54□□□□□ -0.4
CTCFL-201ENST00000243914 NAV1Q8NEY1 1877 aa12.53□□□□□ -0.4
CTCFL-201ENST00000243914 PSMD14O00487 310 aa12.53□□□□□ -0.4
CTCFL-201ENST00000243914 RRP1BQ14684 758 aaKnown RBP12.53□□□□□ -0.4
CTCFL-201ENST00000243914 CNKSR1Q969H4 720 aa12.53□□□□□ -0.4
CTCFL-201ENST00000243914 RRP36Q96EU6 259 aaKnown RBP12.53□□□□□ -0.4
CTCFL-201ENST00000243914 MAN1B1Q9UKM7 699 aa12.53□□□□□ -0.4
CTCFL-201ENST00000243914 DDX60LQ5H9U9 1706 aaKnown RBP12.53□□□□□ -0.4
CTCFL-201ENST00000243914 HLA-DOAP06340 250 aa12.53□□□□□ -0.4
CTCFL-201ENST00000243914 EEF2P13639 858 aaKnown RBP12.53□□□□□ -0.4
CTCFL-201ENST00000243914 USH1GQ495M9 461 aa12.53□□□□□ -0.4
CTCFL-201ENST00000243914 TMC6Q7Z403 805 aa12.53□□□□□ -0.4
CTCFL-201ENST00000243914 PLA2G4DQ86XP0 818 aa12.53□□□□□ -0.4
CTCFL-201ENST00000243914 TRMT1Q9NXH9 659 aaKnown RBP12.53□□□□□ -0.4
CTCFL-201ENST00000243914 TMEM232C9JQI7 657 aa12.53□□□□□ -0.4
CTCFL-201ENST00000243914 TNNI2P48788 182 aa12.53□□□□□ -0.4
CTCFL-201ENST00000243914 PPP2R5BQ15173 497 aa12.53□□□□□ -0.4
CTCFL-201ENST00000243914 TMC4Q7Z404 712 aa12.53□□□□□ -0.4
CTCFL-201ENST00000243914 NAT10Q9H0A0 1025 aaKnown RBP12.53□□□□□ -0.4
CTCFL-201ENST00000243914 FZD1Q9UP38 647 aa12.53□□□□□ -0.4
CTCFL-201ENST00000243914 CEP131Q9UPN4 1083 aa12.53□□□□□ -0.4
CTCFL-201ENST00000243914 RCAN1P53805 252 aa12.52□□□□□ -0.4
CTCFL-201ENST00000243914 GABPAQ06546 454 aa12.52□□□□□ -0.4
CTCFL-201ENST00000243914 CERKLQ49MI3 558 aaPredicted RBP12.52□□□□□ -0.4
CTCFL-201ENST00000243914 TTLL6Q8N841 843 aa12.52□□□□□ -0.4
CTCFL-201ENST00000243914 CSRNP1Q96S65 589 aa12.52□□□□□ -0.4
CTCFL-201ENST00000243914 BARHL2Q9NY43 387 aa12.52□□□□□ -0.4
CTCFL-201ENST00000243914 CDK5RAP2Q96SN8 1893 aa12.52□□□□□ -0.41
CTCFL-201ENST00000243914 ACTN4O43707 911 aaKnown RBP12.52□□□□□ -0.41
CTCFL-201ENST00000243914 SERPINC1P01008 464 aa12.52□□□□□ -0.41
CTCFL-201ENST00000243914 SOGA3Q5TF21 947 aa12.52□□□□□ -0.41
CTCFL-201ENST00000243914 STRIP1Q5VSL9 837 aa12.52□□□□□ -0.41
CTCFL-201ENST00000243914 ADGRF4Q8IZF3 695 aa12.52□□□□□ -0.41
CTCFL-201ENST00000243914 C7orf43Q8WVR3 580 aa12.52□□□□□ -0.41
CTCFL-201ENST00000243914 SMARCE1Q969G3 411 aa12.52□□□□□ -0.41
CTCFL-201ENST00000243914 USP17L15C9J2P7 530 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 USP17L13C9JLJ4 530 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 USP17L11C9JVI0 530 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 USP17L18D6R9N7 530 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 USP17L22D6RA61 530 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 USP17L17D6RBQ6 530 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 USP17L19D6RCP7 530 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 USP17L20D6RJB6 530 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 PPP1R11O60927 126 aaPredicted RBP12.51□□□□□ -0.41
CTCFL-201ENST00000243914 GH2P01242 217 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 TECP42680 631 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 USP17L24Q0WX57 530 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 NCAPHQ15003 741 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 USP17L6PQ6QN14 398 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 SLC30A10Q6XR72 485 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 TBCKQ8TEA7 893 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 SAMSN1Q9NSI8 373 aaKnown RBP12.51□□□□□ -0.41
CTCFL-201ENST00000243914 LAMB1P07942 1786 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 TTLL1O95922 423 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 EGFRP00533 1210 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 ERCC3P19447 782 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 TXKP42681 527 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 ECE1P42892 770 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 CUL4BQ13620 913 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 NOLC1Q14978 699 aaKnown RBP eCLIP12.51□□□□□ -0.41
CTCFL-201ENST00000243914 ROBO3Q96MS0 1386 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 BAG6P46379 1132 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 MDM2Q00987 491 aaPredicted RBP12.51□□□□□ -0.41
CTCFL-201ENST00000243914 DGKZQ13574 1117 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 PAGE5Q96GU1 130 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 TMEM39BQ9GZU3 492 aa12.51□□□□□ -0.41
CTCFL-201ENST00000243914 TDP2O95551 362 aa12.5□□□□□ -0.41
CTCFL-201ENST00000243914 CD44P16070 742 aaKnown RBP12.5□□□□□ -0.41
CTCFL-201ENST00000243914 PRAMEF18Q5VWM3 479 aa12.5□□□□□ -0.41
CTCFL-201ENST00000243914 STYK1Q6J9G0 422 aa12.5□□□□□ -0.41
CTCFL-201ENST00000243914 HPS3Q969F9 1004 aa12.5□□□□□ -0.41
CTCFL-201ENST00000243914 C16orf45Q96MC5 204 aaPredicted RBP12.5□□□□□ -0.41
CTCFL-201ENST00000243914 CDK11BP21127 795 aaKnown RBP12.5□□□□□ -0.41
CTCFL-201ENST00000243914 HHIPL2Q6UWX4 724 aa12.5□□□□□ -0.41
CTCFL-201ENST00000243914 POTEDQ86YR6 584 aa12.5□□□□□ -0.41
CTCFL-201ENST00000243914 ZDHHC15Q96MV8 337 aa12.5□□□□□ -0.41
CTCFL-201ENST00000243914 MTRQ99707 1265 aa12.5□□□□□ -0.41
CTCFL-201ENST00000243914 HSD3B7Q9H2F3 369 aa12.5□□□□□ -0.41
CTCFL-201ENST00000243914 JMJD4Q9H9V9 463 aa12.5□□□□□ -0.41
CTCFL-201ENST00000243914 USP27XA6NNY8 438 aa12.5□□□□□ -0.41
CTCFL-201ENST00000243914 SLC1A4P43007 532 aa12.5□□□□□ -0.41
CTCFL-201ENST00000243914 ATP2C1P98194 919 aaPredicted RBP12.5□□□□□ -0.41
CTCFL-201ENST00000243914 R3HDM1Q15032 1099 aaKnown RBP12.5□□□□□ -0.41
CTCFL-201ENST00000243914 ZNF592Q92610 1267 aa12.5□□□□□ -0.41
CTCFL-201ENST00000243914 MED15Q96RN5 788 aa12.5□□□□□ -0.41
CTCFL-201ENST00000243914 TCP11L1Q9NUJ3 509 aa12.5□□□□□ -0.41
CTCFL-201ENST00000243914 GNAQP50148 359 aa12.49□□□□□ -0.41
CTCFL-201ENST00000243914 FANCCQ00597 558 aa12.49□□□□□ -0.41
CTCFL-201ENST00000243914 NBPF9Q3BBW0 867 aa12.49□□□□□ -0.41
CTCFL-201ENST00000243914 LRRC15Q8TF66 581 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms