RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 KIAA1468Q9P260 1216 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 HSPA8P11142 646 aaKnown RBP7.39□□□□□ -1.23
CSMD2-201ENST00000241312 GPBP1Q86WP2 473 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 KBTBD3Q8NAB2 608 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 DMRT2Q9Y5R5 561 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 PDE6CP51160 858 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 FBXO41Q8TF61 875 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 NLRP7Q8WX94 980 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 PHKBQ93100 1093 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 TRIM35Q9UPQ4 493 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 TXKP42681 527 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 ANKRD20A4Q4UJ75 823 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 ANKRD20A8PQ5CZ79 823 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 ANKRD20A2Q5SQ80 823 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 ANKRD20A1Q5TYW2 823 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 SLC17A8Q8NDX2 589 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 POMGNT1Q8WZA1 660 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 ZNF215Q9UL58 517 aaPredicted RBP7.39□□□□□ -1.23
CSMD2-201ENST00000241312 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.39□□□□□ -1.23
CSMD2-201ENST00000241312 PARP3Q9Y6F1 533 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 KCNK3O14649 394 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 PFKFB1P16118 471 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 TNNI1P19237 187 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 LMNB1P20700 586 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 TRIM42Q8IWZ5 723 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 LRGUKQ96M69 825 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 METTL22Q9BUU2 404 aaPredicted RBP7.39□□□□□ -1.23
CSMD2-201ENST00000241312 CCDC68Q9H2F9 335 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 ADKP55263 362 aaKnown RBP7.39□□□□□ -1.23
CSMD2-201ENST00000241312 TRMT44Q8IYL2 757 aaKnown RBP7.39□□□□□ -1.23
CSMD2-201ENST00000241312 M0QZ92 97 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 NSFP46459 744 aaKnown RBP7.39□□□□□ -1.23
CSMD2-201ENST00000241312 LRRC8CQ8TDW0 803 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 SNX14Q9Y5W7 946 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 TTC4O95801 387 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 ESRRGP62508 458 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 GALNT17Q6IS24 598 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 PLBD2Q8NHP8 589 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 PNMA2Q9UL42 364 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 SBNO1A3KN83 1393 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 EPHB4P54760 987 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 DEUP1Q05D60 604 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 RINT1Q6NUQ1 792 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 TM6SF1Q9BZW5 370 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 SPECC1L-ADORA2AF8WAN1 911 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 ETF1P62495 437 aaKnown RBP7.38□□□□□ -1.23
CSMD2-201ENST00000241312 PTPROQ16827 1216 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 EFCAB13Q8IY85 973 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 NFATC2IPQ8NCF5 419 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 SPZ1Q9BXG8 430 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 NSFL1CQ9UNZ2 370 aaKnown RBP7.38□□□□□ -1.23
CSMD2-201ENST00000241312 IVNS1ABPQ9Y6Y0 642 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 PEX19P40855 299 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 MYSM1Q5VVJ2 828 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 MYO5CQ9NQX4 1742 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 ANKRD12Q6UB98 2062 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 FRMD3A2A2Y4 597 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 ARHGEF10O15013 1369 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 ZMYM6O95789 1325 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 SRGAP2BP0DMP2 458 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 DDB1Q16531 1140 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 MMEL1Q495T6 779 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 BCAS4Q8TDM0 211 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 KAT6AQ92794 2004 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 DSCC1Q9BVC3 393 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 ITGA6P23229 1130 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 CDC25BP30305 580 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 CDKL2Q92772 493 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 HINFPQ9BQA5 517 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 MICAL3Q7RTP6 2002 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 PRPF6O94906 941 aaKnown RBP7.38□□□□□ -1.23
CSMD2-201ENST00000241312 MTHFSDQ2M296 383 aaKnown RBP7.38□□□□□ -1.23
CSMD2-201ENST00000241312 SLFN12Q8IYM2 578 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 SCYL1Q96KG9 808 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 GPHNQ9NQX3 736 aaPredicted RBP7.38□□□□□ -1.23
CSMD2-201ENST00000241312 NDUFB9Q9Y6M9 179 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 BAG2O95816 211 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 SPATA5Q8NB90 893 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 PCDHB13Q9Y5F0 798 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 KRT19P08727 400 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 SEPT2Q15019 361 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 ANKFY1Q9P2R3 1169 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 SAP30BPQ9UHR5 308 aaKnown RBP7.38□□□□□ -1.23
CSMD2-201ENST00000241312 RNF8O76064 485 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 MYOCDQ8IZQ8 938 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 CCHCR1Q8TD31 782 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 XAGE2Q96GT9 111 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 CENPKQ9BS16 269 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 BRD1O95696 1058 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 GARSP41250 739 aaKnown RBP7.38□□□□□ -1.23
CSMD2-201ENST00000241312 PPP2R5CQ13362 524 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 TMTC3Q6ZXV5 915 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 ARMT1Q9H993 441 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 POLKQ9UBT6 870 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 A2MP01023 1474 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 ATP8B1O43520 1251 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 S100BP04271 92 aaPredicted RBP7.38□□□□□ -1.23
CSMD2-201ENST00000241312 YARSP54577 528 aaKnown RBP7.38□□□□□ -1.23
CSMD2-201ENST00000241312 RASIP1Q5U651 963 aa7.38□□□□□ -1.23
CSMD2-201ENST00000241312 NRBF2Q96F24 287 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms