RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 YDJCA8MPS7 323 aa26.49■■□□□ 1.83
MSX2-201ENST00000239243 EIF6P56537 245 aaKnown RBP26.49■■□□□ 1.83
MSX2-201ENST00000239243 USP49Q70CQ1 688 aa26.49■■□□□ 1.83
MSX2-201ENST00000239243 SMARCE1Q969G3 411 aa26.49■■□□□ 1.83
MSX2-201ENST00000239243 CPVLQ9H3G5 476 aa26.49■■□□□ 1.83
MSX2-201ENST00000239243 PCDHAC2Q9Y5I4 1007 aa26.49■■□□□ 1.83
MSX2-201ENST00000239243 COL2A1P02458 1487 aaPredicted RBP26.49■■□□□ 1.83
MSX2-201ENST00000239243 SIPA1L1O43166 1804 aa26.48■■□□□ 1.83
MSX2-201ENST00000239243 LAD1O00515 517 aa26.48■■□□□ 1.83
MSX2-201ENST00000239243 ADAMTS3O15072 1205 aa26.48■■□□□ 1.83
MSX2-201ENST00000239243 CACNB3P54284 484 aa26.48■■□□□ 1.83
MSX2-201ENST00000239243 ZNF543Q08ER8 600 aa26.48■■□□□ 1.83
MSX2-201ENST00000239243 EPSTI1Q96J88 318 aa26.48■■□□□ 1.83
MSX2-201ENST00000239243 FRMPD2Q68DX3 1309 aaPredicted RBP26.48■■□□□ 1.83
MSX2-201ENST00000239243 SMCO2A6NFE2 343 aa26.47■■□□□ 1.83
MSX2-201ENST00000239243 SLFN14P0C7P3 912 aa26.47■■□□□ 1.83
MSX2-201ENST00000239243 LONP1P36776 959 aaKnown RBP26.47■■□□□ 1.83
MSX2-201ENST00000239243 CFAP100Q494V2 611 aa26.47■■□□□ 1.83
MSX2-201ENST00000239243 RASGRP4Q8TDF6 673 aa26.47■■□□□ 1.83
MSX2-201ENST00000239243 VAT1LQ9HCJ6 419 aa26.47■■□□□ 1.83
MSX2-201ENST00000239243 DACH1Q9UI36 760 aa26.47■■□□□ 1.83
MSX2-201ENST00000239243 ATRNL1Q5VV63 1379 aa26.47■■□□□ 1.83
MSX2-201ENST00000239243 DDTLA6NHG4 134 aaPredicted RBP26.47■■□□□ 1.83
MSX2-201ENST00000239243 SMC2O95347 1197 aa26.47■■□□□ 1.83
MSX2-201ENST00000239243 CERKLQ49MI3 558 aaPredicted RBP26.47■■□□□ 1.83
MSX2-201ENST00000239243 UBA5Q9GZZ9 404 aa26.47■■□□□ 1.83
MSX2-201ENST00000239243 DNAJC18Q9H819 358 aa26.47■■□□□ 1.83
MSX2-201ENST00000239243 TTC12Q9H892 705 aaPredicted RBP26.47■■□□□ 1.83
MSX2-201ENST00000239243 MYH4Q9Y623 1939 aa26.47■■□□□ 1.83
MSX2-201ENST00000239243 DHX58Q96C10 678 aa26.46■■□□□ 1.83
MSX2-201ENST00000239243 SARSP49591 514 aaKnown RBP26.46■■□□□ 1.83
MSX2-201ENST00000239243 TATDN1Q6P1N9 297 aa26.46■■□□□ 1.83
MSX2-201ENST00000239243 KANSL2Q9H9L4 492 aa26.46■■□□□ 1.83
MSX2-201ENST00000239243 FOXN1O15353 648 aa26.45■■□□□ 1.82
MSX2-201ENST00000239243 TXLNAP40222 546 aa26.45■■□□□ 1.82
MSX2-201ENST00000239243 NONOQ15233 471 aaKnown RBP eCLIP26.45■■□□□ 1.82
MSX2-201ENST00000239243 ISM2Q6H9L7 571 aa26.45■■□□□ 1.82
MSX2-201ENST00000239243 PPP1R18Q6NYC8 613 aa26.45■■□□□ 1.82
MSX2-201ENST00000239243 RSBN1LQ6PCB5 846 aaPredicted RBP26.45■■□□□ 1.82
MSX2-201ENST00000239243 CLEC10AQ8IUN9 316 aa26.45■■□□□ 1.82
MSX2-201ENST00000239243 C4orf32Q8N8J7 132 aa26.45■■□□□ 1.82
MSX2-201ENST00000239243 NYAP2Q9P242 653 aa26.45■■□□□ 1.82
MSX2-201ENST00000239243 KIF13BQ9NQT8 1826 aa26.45■■□□□ 1.82
MSX2-201ENST00000239243 MYO1BO43795 1136 aa26.45■■□□□ 1.82
MSX2-201ENST00000239243 DPEP1P16444 411 aa26.45■■□□□ 1.82
MSX2-201ENST00000239243 MYL5Q02045 173 aa26.45■■□□□ 1.82
MSX2-201ENST00000239243 INF2Q27J81 1249 aa26.45■■□□□ 1.82
MSX2-201ENST00000239243 LARGE2Q8N3Y3 721 aa26.45■■□□□ 1.82
MSX2-201ENST00000239243 SPATA20Q8TB22 786 aa26.45■■□□□ 1.82
MSX2-201ENST00000239243 FBXO41Q8TF61 875 aa26.45■■□□□ 1.82
MSX2-201ENST00000239243 TDRD3Q9H7E2 651 aaKnown RBP26.45■■□□□ 1.82
MSX2-201ENST00000239243 TMOD2Q9NZR1 351 aa26.45■■□□□ 1.82
MSX2-201ENST00000239243 HDAC9Q9UKV0 1011 aa26.45■■□□□ 1.82
MSX2-201ENST00000239243 ATP2B2Q01814 1243 aa26.44■■□□□ 1.82
MSX2-201ENST00000239243 ORC2Q13416 577 aaPredicted RBP26.44■■□□□ 1.82
MSX2-201ENST00000239243 SH3BP5LQ7L8J4 393 aa26.44■■□□□ 1.82
MSX2-201ENST00000239243 IQUBQ8NA54 791 aa26.44■■□□□ 1.82
MSX2-201ENST00000239243 MLKLQ8NB16 471 aa26.44■■□□□ 1.82
MSX2-201ENST00000239243 MKL1Q969V6 931 aa26.44■■□□□ 1.82
MSX2-201ENST00000239243 ZNF830Q96NB3 372 aaPredicted RBP26.44■■□□□ 1.82
MSX2-201ENST00000239243 MAN1B1Q9UKM7 699 aa26.44■■□□□ 1.82
MSX2-201ENST00000239243 NCAPHQ15003 741 aa26.43■■□□□ 1.82
MSX2-201ENST00000239243 REXO1Q8N1G1 1221 aaKnown RBP26.43■■□□□ 1.82
MSX2-201ENST00000239243 GPCPD1Q9NPB8 672 aa26.43■■□□□ 1.82
MSX2-201ENST00000239243 KCNA3P22001 575 aa26.43■■□□□ 1.82
MSX2-201ENST00000239243 PRPHP41219 470 aa26.43■■□□□ 1.82
MSX2-201ENST00000239243 DTHD1Q6ZMT9 781 aa26.43■■□□□ 1.82
MSX2-201ENST00000239243 TMEM179Q6ZVK1 233 aa26.43■■□□□ 1.82
MSX2-201ENST00000239243 SH3RF1Q7Z6J0 888 aa26.43■■□□□ 1.82
MSX2-201ENST00000239243 A0A087X0B3 334 aa26.42■■□□□ 1.82
MSX2-201ENST00000239243 PNMA6FA0A0J9YX94 578 aa26.42■■□□□ 1.82
MSX2-201ENST00000239243 PRR29P0C7W0 189 aa26.42■■□□□ 1.82
MSX2-201ENST00000239243 CCDC96Q2M329 555 aa26.42■■□□□ 1.82
MSX2-201ENST00000239243 VIL1P09327 827 aaKnown RBP26.42■■□□□ 1.82
MSX2-201ENST00000239243 MORC3Q14149 939 aa26.42■■□□□ 1.82
MSX2-201ENST00000239243 PRMT6Q96LA8 375 aaPredicted RBP26.42■■□□□ 1.82
MSX2-201ENST00000239243 CT47A1Q5JQC4 288 aaPredicted RBP26.41■■□□□ 1.82
MSX2-201ENST00000239243 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.41■■□□□ 1.82
MSX2-201ENST00000239243 CCDC186Q7Z3E2 898 aa26.41■■□□□ 1.82
MSX2-201ENST00000239243 OGFOD1Q8N543 542 aa26.41■■□□□ 1.82
MSX2-201ENST00000239243 DCAF4Q8WV16 495 aa26.41■■□□□ 1.82
MSX2-201ENST00000239243 PAGE5Q96GU1 130 aa26.41■■□□□ 1.82
MSX2-201ENST00000239243 PTGS1P23219 599 aa26.41■■□□□ 1.82
MSX2-201ENST00000239243 IL17AQ16552 155 aa26.41■■□□□ 1.82
MSX2-201ENST00000239243 NEK8Q86SG6 692 aa26.41■■□□□ 1.82
MSX2-201ENST00000239243 ADGRF4Q8IZF3 695 aa26.41■■□□□ 1.82
MSX2-201ENST00000239243 JMJD4Q9H9V9 463 aa26.41■■□□□ 1.82
MSX2-201ENST00000239243 ADCY7P51828 1080 aa26.4■■□□□ 1.82
MSX2-201ENST00000239243 SPDYE2BA6NHP3 402 aa26.39■■□□□ 1.82
MSX2-201ENST00000239243 SPDYE6P0CI01 402 aa26.39■■□□□ 1.82
MSX2-201ENST00000239243 EEF2P13639 858 aaKnown RBP26.39■■□□□ 1.82
MSX2-201ENST00000239243 GSDMAQ96QA5 445 aa26.39■■□□□ 1.82
MSX2-201ENST00000239243 FAM196BA6NMK8 535 aa26.39■■□□□ 1.81
MSX2-201ENST00000239243 OFD1O75665 1012 aa26.39■■□□□ 1.81
MSX2-201ENST00000239243 TGFB2P61812 414 aa26.39■■□□□ 1.81
MSX2-201ENST00000239243 E2F4Q16254 413 aa26.39■■□□□ 1.81
MSX2-201ENST00000239243 ABCB5Q2M3G0 1257 aa26.39■■□□□ 1.81
MSX2-201ENST00000239243 GRAMD1CQ8IYS0 662 aa26.39■■□□□ 1.81
MSX2-201ENST00000239243 KCNF1Q9H3M0 494 aa26.39■■□□□ 1.81
MSX2-201ENST00000239243 HERC5Q9UII4 1024 aaKnown RBP26.39■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms