RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 IRGCQ6NXR0 463 aa9.34□□□□□ -0.91
SPARC-201ENST00000231061 TMEM87AQ8NBN3 555 aa9.34□□□□□ -0.91
SPARC-201ENST00000231061 MAK16Q9BXY0 300 aaKnown RBP9.34□□□□□ -0.91
SPARC-201ENST00000231061 TRPV5Q9NQA5 729 aa9.34□□□□□ -0.91
SPARC-201ENST00000231061 MTMR6Q9Y217 621 aa9.34□□□□□ -0.91
SPARC-201ENST00000231061 USP42Q9H9J4 1324 aaKnown RBP9.34□□□□□ -0.91
SPARC-201ENST00000231061 GOLGA6L4A6NEF3 574 aa9.34□□□□□ -0.91
SPARC-201ENST00000231061 STXBP3O00186 592 aa9.34□□□□□ -0.91
SPARC-201ENST00000231061 IL33O95760 270 aa9.34□□□□□ -0.91
SPARC-201ENST00000231061 CCDC159P0C7I6 412 aa9.34□□□□□ -0.91
SPARC-201ENST00000231061 CCDC152Q4G0S7 254 aa9.34□□□□□ -0.91
SPARC-201ENST00000231061 BLOC1S2Q6QNY1 142 aa9.34□□□□□ -0.91
SPARC-201ENST00000231061 CAPN12Q6ZSI9 719 aa9.34□□□□□ -0.91
SPARC-201ENST00000231061 LINS1Q8NG48 757 aa9.34□□□□□ -0.91
SPARC-201ENST00000231061 TMC2Q8TDI7 906 aa9.34□□□□□ -0.91
SPARC-201ENST00000231061 RABGGTAQ92696 567 aa9.34□□□□□ -0.91
SPARC-201ENST00000231061 EAF2Q96CJ1 260 aaPredicted RBP9.34□□□□□ -0.91
SPARC-201ENST00000231061 PARD6BQ9BYG5 372 aa9.34□□□□□ -0.91
SPARC-201ENST00000231061 OSBPL5Q9H0X9 879 aaPredicted RBP9.34□□□□□ -0.91
SPARC-201ENST00000231061 HIP1O00291 1037 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 RTN3O95197 1032 aaPredicted RBP9.33□□□□□ -0.92
SPARC-201ENST00000231061 PSMA5P28066 241 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 CENPAP49450 140 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 MTX1Q13505 466 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 TEX35Q5T0J7 233 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 FAM9CQ8IZT9 166 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 SYCP3Q8IZU3 236 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 GIMAP8Q8ND71 665 aaPredicted RBP9.33□□□□□ -0.92
SPARC-201ENST00000231061 EPAS1Q99814 870 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 ZSWIM6Q9HCJ5 1215 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 ATP6V0A2Q9Y487 856 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 LRRC41Q15345 812 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 LRRC23Q53EV4 343 aaPredicted RBP9.33□□□□□ -0.92
SPARC-201ENST00000231061 FAM173BQ6P4H8 233 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 ANKLE2Q86XL3 938 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 CKAP2LQ8IYA6 745 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 RNF168Q8IYW5 571 aaPredicted RBP9.33□□□□□ -0.92
SPARC-201ENST00000231061 FNBP1Q96RU3 617 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 ORAI2Q96SN7 254 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 PLEKHG2Q9H7P9 1386 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 A0A0D9SFI3 127 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 GTPBP6O43824 516 aaPredicted RBP9.33□□□□□ -0.92
SPARC-201ENST00000231061 MBD4O95243 580 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 VIL1P09327 827 aaKnown RBP9.33□□□□□ -0.92
SPARC-201ENST00000231061 FBXW10Q5XX13 1052 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 EPSTI1Q96J88 318 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 MYD88Q99836 296 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 DNAAF2Q9NVR5 837 aaKnown RBP9.33□□□□□ -0.92
SPARC-201ENST00000231061 TPCN1Q9ULQ1 816 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 TUBGCP6Q96RT7 1819 aa9.33□□□□□ -0.92
SPARC-201ENST00000231061 CEP104O60308 925 aa9.32□□□□□ -0.92
SPARC-201ENST00000231061 PIP4K2AP48426 406 aaPredicted RBP9.32□□□□□ -0.92
SPARC-201ENST00000231061 UBXN2AP68543 259 aa9.32□□□□□ -0.92
SPARC-201ENST00000231061 CBLBQ13191 982 aa9.32□□□□□ -0.92
SPARC-201ENST00000231061 UBE4AQ14139 1066 aa9.32□□□□□ -0.92
SPARC-201ENST00000231061 C17orf53Q8N3J3 647 aaPredicted RBP9.32□□□□□ -0.92
SPARC-201ENST00000231061 PPP1R14BQ96C90 147 aa9.32□□□□□ -0.92
SPARC-201ENST00000231061 SYNCQ9H7C4 482 aa9.32□□□□□ -0.92
SPARC-201ENST00000231061 DDX56Q9NY93 547 aaKnown RBP9.32□□□□□ -0.92
SPARC-201ENST00000231061 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.32□□□□□ -0.92
SPARC-201ENST00000231061 PXDNQ92626 1479 aa9.32□□□□□ -0.92
SPARC-201ENST00000231061 CACNA1FO60840 1977 aa9.32□□□□□ -0.92
SPARC-201ENST00000231061 KRT85P78386 507 aa9.32□□□□□ -0.92
SPARC-201ENST00000231061 CAMK4Q16566 473 aa9.32□□□□□ -0.92
SPARC-201ENST00000231061 CCDC158Q5M9N0 1113 aa9.32□□□□□ -0.92
SPARC-201ENST00000231061 NAA16Q6N069 864 aaPredicted RBP9.32□□□□□ -0.92
SPARC-201ENST00000231061 BRSK2Q8IWQ3 736 aa9.32□□□□□ -0.92
SPARC-201ENST00000231061 KIRREL3Q8IZU9 778 aa9.32□□□□□ -0.92
SPARC-201ENST00000231061 MIPOL1Q8TD10 442 aa9.32□□□□□ -0.92
SPARC-201ENST00000231061 EDC3Q96F86 508 aaKnown RBP9.32□□□□□ -0.92
SPARC-201ENST00000231061 TM6SF1Q9BZW5 370 aa9.32□□□□□ -0.92
SPARC-201ENST00000231061 POLG2Q9UHN1 485 aa9.32□□□□□ -0.92
SPARC-201ENST00000231061 A0A1W2PRQ8 180 aa9.32□□□□□ -0.92
SPARC-201ENST00000231061 EIF3CLB5ME19 914 aaKnown RBP9.32□□□□□ -0.92
SPARC-201ENST00000231061 PRMT3O60678 531 aa9.32□□□□□ -0.92
SPARC-201ENST00000231061 CRYMQ14894 314 aa9.32□□□□□ -0.92
SPARC-201ENST00000231061 NECTIN1Q15223 517 aa9.32□□□□□ -0.92
SPARC-201ENST00000231061 IMMTQ16891 758 aaKnown RBP9.32□□□□□ -0.92
SPARC-201ENST00000231061 THEMIS2Q5TEJ8 643 aa9.32□□□□□ -0.92
SPARC-201ENST00000231061 EIF3CQ99613 913 aaKnown RBP9.32□□□□□ -0.92
SPARC-201ENST00000231061 DDX21Q9NR30 783 aaKnown RBP eCLIP9.32□□□□□ -0.92
SPARC-201ENST00000231061 XPO7Q9UIA9 1087 aaKnown RBP9.32□□□□□ -0.92
SPARC-201ENST00000231061 XPOTO43592 962 aaKnown RBP9.31□□□□□ -0.92
SPARC-201ENST00000231061 ERLIN1O75477 346 aa9.31□□□□□ -0.92
SPARC-201ENST00000231061 FUT4P22083 530 aa9.31□□□□□ -0.92
SPARC-201ENST00000231061 USP8P40818 1118 aa9.31□□□□□ -0.92
SPARC-201ENST00000231061 SVIPQ8NHG7 77 aa9.31□□□□□ -0.92
SPARC-201ENST00000231061 SMARCC2Q8TAQ2 1214 aa9.31□□□□□ -0.92
SPARC-201ENST00000231061 FAM76AQ8TAV0 307 aa9.31□□□□□ -0.92
SPARC-201ENST00000231061 XAGE3Q8WTP9 111 aa9.31□□□□□ -0.92
SPARC-201ENST00000231061 RAPGEF4Q8WZA2 1011 aa9.31□□□□□ -0.92
SPARC-201ENST00000231061 SAAL1Q96ER3 474 aa9.31□□□□□ -0.92
SPARC-201ENST00000231061 ACAD8Q9UKU7 415 aa9.31□□□□□ -0.92
SPARC-201ENST00000231061 MUSKO15146 869 aa9.31□□□□□ -0.92
SPARC-201ENST00000231061 POLR3GO15318 223 aaPredicted RBP9.31□□□□□ -0.92
SPARC-201ENST00000231061 RECKO95980 971 aa9.31□□□□□ -0.92
SPARC-201ENST00000231061 POLD2P49005 469 aa9.31□□□□□ -0.92
SPARC-201ENST00000231061 CLNS1AP54105 237 aaKnown RBP9.31□□□□□ -0.92
SPARC-201ENST00000231061 GEMIN4P57678 1058 aaKnown RBP9.31□□□□□ -0.92
SPARC-201ENST00000231061 LARP1Q6PKG0 1096 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms