RNA–Protein interactions for RNA: ENST00000226328.8

RUFY3-201, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 4,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-201ENST00000226328 RETREG2Q8NC44 543 aa6.09□□□□□ -1.43
RUFY3-201ENST00000226328 SLC44A5Q8NCS7 719 aa6.09□□□□□ -1.43
RUFY3-201ENST00000226328 SYNPO2Q9UMS6 1093 aa6.09□□□□□ -1.43
RUFY3-201ENST00000226328 CYP2D7A0A087X1C5 515 aa6.09□□□□□ -1.43
RUFY3-201ENST00000226328 M0QZ92 97 aa6.09□□□□□ -1.43
RUFY3-201ENST00000226328 M0R2C6 588 aa6.09□□□□□ -1.43
RUFY3-201ENST00000226328 ORC4O43929 436 aa6.09□□□□□ -1.43
RUFY3-201ENST00000226328 DKC1O60832 514 aaKnown RBP eCLIP6.09□□□□□ -1.43
RUFY3-201ENST00000226328 PDCP20941 246 aa6.09□□□□□ -1.43
RUFY3-201ENST00000226328 TM4SF4P48230 202 aa6.09□□□□□ -1.43
RUFY3-201ENST00000226328 PRELPP51888 382 aa6.09□□□□□ -1.43
RUFY3-201ENST00000226328 NEK4P51957 841 aa6.09□□□□□ -1.43
RUFY3-201ENST00000226328 FMR1Q06787 632 aaKnown RBP eCLIP6.09□□□□□ -1.43
RUFY3-201ENST00000226328 SEC62Q99442 399 aaKnown RBP6.09□□□□□ -1.43
RUFY3-201ENST00000226328 RAB34Q9BZG1 259 aa6.09□□□□□ -1.43
RUFY3-201ENST00000226328 AZI2Q9H6S1 392 aa6.09□□□□□ -1.43
RUFY3-201ENST00000226328 MLXIPQ9HAP2 919 aa6.09□□□□□ -1.43
RUFY3-201ENST00000226328 TMX2Q9Y320 296 aa6.09□□□□□ -1.43
RUFY3-201ENST00000226328 R3HCC1Q9Y3T6 440 aaKnown RBP6.09□□□□□ -1.43
RUFY3-201ENST00000226328 SAMM50Q9Y512 469 aa6.09□□□□□ -1.43
RUFY3-201ENST00000226328 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.09□□□□□ -1.43
RUFY3-201ENST00000226328 SNCAIPQ9Y6H5 919 aa6.09□□□□□ -1.43
RUFY3-201ENST00000226328 PFASO15067 1338 aa6.09□□□□□ -1.43
RUFY3-201ENST00000226328 TNKSO95271 1327 aa6.09□□□□□ -1.43
RUFY3-201ENST00000226328 PASKQ96RG2 1323 aa6.09□□□□□ -1.43
RUFY3-201ENST00000226328 A0A1B0GUL6 1792 aa6.09□□□□□ -1.43
RUFY3-201ENST00000226328 SLC15A5A6NIM6 579 aa6.09□□□□□ -1.44
RUFY3-201ENST00000226328 GSG1L2A8MUP6 293 aa6.09□□□□□ -1.44
RUFY3-201ENST00000226328 KLRF2D3W0D1 207 aa6.09□□□□□ -1.44
RUFY3-201ENST00000226328 SGSM2O43147 1006 aa6.09□□□□□ -1.44
RUFY3-201ENST00000226328 DDAH1O94760 285 aa6.09□□□□□ -1.44
RUFY3-201ENST00000226328 HMGCRP04035 888 aa6.09□□□□□ -1.44
RUFY3-201ENST00000226328 CYP2C8P10632 490 aa6.09□□□□□ -1.44
RUFY3-201ENST00000226328 CCDC84Q86UT8 332 aaPredicted RBP6.09□□□□□ -1.44
RUFY3-201ENST00000226328 IFNLR1Q8IU57 520 aaPredicted RBP6.09□□□□□ -1.44
RUFY3-201ENST00000226328 ZNF296Q8WUU4 475 aaPredicted RBP6.09□□□□□ -1.44
RUFY3-201ENST00000226328 CEP95Q96GE4 821 aa6.09□□□□□ -1.44
RUFY3-201ENST00000226328 CDK5RAP3Q96JB5 506 aa6.09□□□□□ -1.44
RUFY3-201ENST00000226328 DDX4Q9NQI0 724 aaKnown RBP6.09□□□□□ -1.44
RUFY3-201ENST00000226328 FAM184BQ9ULE4 1060 aa6.09□□□□□ -1.44
RUFY3-201ENST00000226328 SMC3Q9UQE7 1217 aa6.09□□□□□ -1.44
RUFY3-201ENST00000226328 A0A0D9SFI3 127 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 POTECB2RU33 542 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 FOXN1O15353 648 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 ERVK-9P63128 1117 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 ERVK-24P63145 666 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 BRI3BPQ8WY22 251 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 MTMR4Q9NYA4 1195 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 FZD1Q9UP38 647 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 PCDHAC2Q9Y5I4 1007 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 DUOX1Q9NRD9 1551 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 EPB41L2O43491 1005 aaKnown RBP6.08□□□□□ -1.44
RUFY3-201ENST00000226328 NDUFB10O96000 172 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 VCAM1P19320 739 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 PLCD1P51178 756 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 RABEP1Q15276 862 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 GRIK5Q16478 980 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 CREB3L3Q68CJ9 461 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 RNF207Q6ZRF8 634 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 KCTD1Q719H9 257 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 NECAB2Q7Z6G3 386 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 RSPH3Q86UC2 560 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 CCDC155Q8N6L0 562 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 GLT1D1Q96MS3 346 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 RIOK1Q9BRS2 568 aaKnown RBP6.08□□□□□ -1.44
RUFY3-201ENST00000226328 RAVER2Q9HCJ3 691 aaKnown RBP6.08□□□□□ -1.44
RUFY3-201ENST00000226328 SRRDQ9UH36 339 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 MRVI1Q9Y6F6 885 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 ABCB11O95342 1321 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 TIAM2Q8IVF5 1701 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 FRMPD2Q68DX3 1309 aaPredicted RBP6.08□□□□□ -1.44
RUFY3-201ENST00000226328 FOSP01100 380 aaPredicted RBP6.08□□□□□ -1.44
RUFY3-201ENST00000226328 HMGN5P82970 282 aaKnown RBP6.08□□□□□ -1.44
RUFY3-201ENST00000226328 PCSK9Q8NBP7 692 aaKnown RBP6.08□□□□□ -1.44
RUFY3-201ENST00000226328 CCDC47Q96A33 483 aaKnown RBP6.08□□□□□ -1.44
RUFY3-201ENST00000226328 TRERF1Q96PN7 1200 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 P2RX7Q99572 595 aaKnown RBP6.08□□□□□ -1.44
RUFY3-201ENST00000226328 APBA2Q99767 749 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 MTA3Q9BTC8 594 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 SPATC1LQ9H0A9 340 aa6.08□□□□□ -1.44
RUFY3-201ENST00000226328 A0A0G2JLL6 359 aaPredicted RBP6.07□□□□□ -1.44
RUFY3-201ENST00000226328 BACH1O14867 736 aa6.07□□□□□ -1.44
RUFY3-201ENST00000226328 TXLNAP40222 546 aa6.07□□□□□ -1.44
RUFY3-201ENST00000226328 FLT3LGP49771 235 aa6.07□□□□□ -1.44
RUFY3-201ENST00000226328 KCNV1Q6PIU1 500 aa6.07□□□□□ -1.44
RUFY3-201ENST00000226328 PRRT2Q7Z6L0 340 aaPredicted RBP6.07□□□□□ -1.44
RUFY3-201ENST00000226328 SHCBP1Q8NEM2 672 aa6.07□□□□□ -1.44
RUFY3-201ENST00000226328 PI4K2BQ8TCG2 481 aa6.07□□□□□ -1.44
RUFY3-201ENST00000226328 ATG4CQ96DT6 458 aa6.07□□□□□ -1.44
RUFY3-201ENST00000226328 SLC24A3Q9HC58 644 aa6.07□□□□□ -1.44
RUFY3-201ENST00000226328 PCDHA1Q9Y5I3 950 aa6.07□□□□□ -1.44
RUFY3-201ENST00000226328 SBF1O95248 1867 aa6.07□□□□□ -1.44
RUFY3-201ENST00000226328 CACNA1SQ13698 1873 aa6.07□□□□□ -1.44
RUFY3-201ENST00000226328 ZNF646O15015 1829 aaPredicted RBP6.07□□□□□ -1.44
RUFY3-201ENST00000226328 DCDC2CA8MYV0 355 aa6.07□□□□□ -1.44
RUFY3-201ENST00000226328 MLLT1Q03111 559 aaPredicted RBP6.07□□□□□ -1.44
RUFY3-201ENST00000226328 NCBP1Q09161 790 aaKnown RBP6.07□□□□□ -1.44
RUFY3-201ENST00000226328 STK3Q13188 491 aa6.07□□□□□ -1.44
RUFY3-201ENST00000226328 TTLL4Q14679 1199 aa6.07□□□□□ -1.44
RUFY3-201ENST00000226328 TMEM266Q2M3C6 531 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms